Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010003237.1:222015-223679[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.47 55 7.9 3.2 1 23 10 32 10 32 0.98

2 15 0.0015 0.17 15.8 0.2 1 23 38 61 38 61 0.94

3 15 0.38 44 8.2 1.4 1 23 128 151 128 151 0.97

4 15 0.02 2.3 12.3 3.8 1 23 187 210 187 214 0.96

5 15 0.2 23 9.1 1.7 1 23 235 258 235 258 0.94

6 15 0.052 6.1 10.9 2.1 1 23 264 287 264 287 0.98

7 15 0.0088 1 13.4 2.6 1 23 293 316 293 316 0.96

8 15 0.11 13 9.9 4.4 2 23 322 344 321 344 0.96

9 15 0.74 86 7.3 2.4 1 23 350 373 350 373 0.91

10 15 6 7e+02 4.5 3.8 1 23 379 402 379 402 0.96

11 15 0.00011 0.013 19.3 0.5 1 23 408 431 408 431 0.96

12 15 0.094 11 10.1 3.1 1 23 437 460 437 460 0.98

13 15 0.0007 0.081 16.8 3.2 1 23 466 489 466 489 0.98

14 15 0.00035 0.04 17.8 1.4 1 23 495 518 495 518 0.96

15 15 0.024 2.8 12.0 2.1 1 23 524 547 524 547 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.47	55	7.9	3.2	1	23	10	32	10	32	0.98
2	15	0.0015	0.17	15.8	0.2	1	23	38	61	38	61	0.94
3	15	0.38	44	8.2	1.4	1	23	128	151	128	151	0.97
4	15	0.02	2.3	12.3	3.8	1	23	187	210	187	214	0.96
5	15	0.2	23	9.1	1.7	1	23	235	258	235	258	0.94
6	15	0.052	6.1	10.9	2.1	1	23	264	287	264	287	0.98
7	15	0.0088	1	13.4	2.6	1	23	293	316	293	316	0.96
8	15	0.11	13	9.9	4.4	2	23	322	344	321	344	0.96
9	15	0.74	86	7.3	2.4	1	23	350	373	350	373	0.91
10	15	6	7e+02	4.5	3.8	1	23	379	402	379	402	0.96
11	15	0.00011	0.013	19.3	0.5	1	23	408	431	408	431	0.96
12	15	0.094	11	10.1	3.1	1	23	437	460	437	460	0.98
13	15	0.0007	0.081	16.8	3.2	1	23	466	489	466	489	0.98
14	15	0.00035	0.04	17.8	1.4	1	23	495	518	495	518	0.96
15	15	0.024	2.8	12.0	2.1	1	23	524	547	524	547	0.96

Sequence Information

Coding Sequence: ATGGCCCAAAGAAGGAAGTGTGGAATATACAAATGTACGCAATGCAAGTTCAGAACAATGTACAACGCCGACTTTAGGCAGCACACTAACGAGCATTACCGGGTGAAAATGTTCAAATGTGGTATTTGTGACAGAAGATACAATGCGAAGGAATCTCTCAAGGCGCACGTGGTAAAAATTCACATTGACAACGAAAGTAGAGATGTCCAAAAACGTTCTAGTTGTGACTATTTCAAAGCTAATATTAAAAATGTAAATGAAAGACGTCCACACTCACATGATGGTGAAAAACAATGTCAATCCTTGAAATGCAAATTGCAAACAAGGGACAAATATCACCTAAAATCACCTAGAAAAATAAAATATATGAACAGAGGTAAATATAAGTGCGCAAGTTGCGAGTTTAAGACATATTATAGAGTTTATTTAGAAAGGCACGTGAAAATAAACCATCTCAGAACTAATAATAACTCAGAGTGTGAATTCGAAACAAGCTATATGTCATCTTACAGGACTTTTTTAGAAATGCACACCAAAGTAAAACATATGGAATGCAATTATAAATGCACAGAATGCGAATTTAAGACAAACTCCCAATCTTGTTTACAAGAACACATAAACGCAAAACATCTTAAAGAACATACTTCTAAATCCACGGAGTGTGAATTCAACACCAACTACAAGTCACATCTTGAAAATAATTATAAATGTACGGAGTGTGAATTCAAGACGAACTACAAGTCAACGTTATATGGGCACGTACAAGGAAAACATCGTAAAGAAAATAGTTATAAATGTATGGAGTGTGAGTACAACACACATCGCAAGGCGTATTTAAAAGGGCATATAAAATCAGTACATTTGAGACAAAAGGATTATAAATGCATGGAGTGTGAATTCAAGGCAAACACCAAGTCACATTTACAAACACACATAAAAGCAAGACATCTTGGCGAAAAGACTAAGTGCGTGAAGTGTGAATTCCGGACATGTTACAAGGCTAGCTTAATAAAACACATGAAATCAAAGCATACGAAACAATATGATTATAATTGCATTGAATGTGAATTCAAGACAAATTACAAGTCACATTTACAACTTCACATAAAAGCAAAACATCGTAACGAATATGATTATAAATGCACAGAGTGTGAATACGAGACAAACTTCAAGAGATGCCGTATAGAACACATAAATTCAAAACATCTTAAGCAAAATGATTATAAGTGTACAGAGTGTGAATATAATACAAGCCGCAAGCCCGACTTACAAAGACACATAAAAGCAATACATCGTAACGAATATGATTATAAATGCACGGAGTGTGAATACGAGACAAACTTCAAGAGATGCTTAATAGAACACATAAATTCAAAGCATCTGAAACAAAATTATTATGAATGCAAGGAGTGTGAATACAAGACTAACTACAAGACAAACTTTGAAAGACACATAAAAACAAAACATCTGAAACAAACTGATTATAAATGCACAGAGTGCGAGTACAAGACAAACTACAAGTCGTCTTTGCAAGCACACATCAAAGCAAAACATCGTAACGAATATGATTATAAATGCACAGAGTGTGAATTCCAGACTAACTTCAAGAGGAGCCTAATAAAACACATAAAAGCAAAACATCTCAAACAAACTGATTATAAATGA
Protein Sequence: MAQRRKCGIYKCTQCKFRTMYNADFRQHTNEHYRVKMFKCGICDRRYNAKESLKAHVVKIHIDNESRDVQKRSSCDYFKANIKNVNERRPHSHDGEKQCQSLKCKLQTRDKYHLKSPRKIKYMNRGKYKCASCEFKTYYRVYLERHVKINHLRTNNNSECEFETSYMSSYRTFLEMHTKVKHMECNYKCTECEFKTNSQSCLQEHINAKHLKEHTSKSTECEFNTNYKSHLENNYKCTECEFKTNYKSTLYGHVQGKHRKENSYKCMECEYNTHRKAYLKGHIKSVHLRQKDYKCMECEFKANTKSHLQTHIKARHLGEKTKCVKCEFRTCYKASLIKHMKSKHTKQYDYNCIECEFKTNYKSHLQLHIKAKHRNEYDYKCTECEYETNFKRCRIEHINSKHLKQNDYKCTECEYNTSRKPDLQRHIKAIHRNEYDYKCTECEYETNFKRCLIEHINSKHLKQNYYECKECEYKTNYKTNFERHIKTKHLKQTDYKCTECEYKTNYKSSLQAHIKAKHRNEYDYKCTECEFQTNFKRSLIKHIKAKHLKQTDYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -