Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000473.1:530103-531821[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0006 0.07 17.0 2.0 1 23 19 42 19 42 0.96

2 16 0.16 18 9.4 4.5 1 23 108 131 108 131 0.97

3 16 0.0021 0.25 15.3 4.2 1 23 137 160 137 160 0.98

4 16 0.00068 0.08 16.9 3.4 1 23 195 218 195 218 0.98

5 16 0.05 5.8 11.0 1.4 1 23 224 247 224 247 0.98

6 16 0.0014 0.17 15.9 2.0 1 23 253 276 253 276 0.98

7 16 0.022 2.6 12.1 1.8 1 23 282 305 282 305 0.98

8 16 0.03 3.5 11.7 0.9 1 23 309 332 309 332 0.93

9 16 0.0029 0.33 14.9 0.5 1 23 338 361 338 361 0.98

10 16 0.00039 0.045 17.6 3.3 1 23 367 390 367 390 0.98

11 16 0.0063 0.74 13.8 1.4 1 23 396 419 396 419 0.98

12 16 0.0011 0.12 16.3 0.8 1 23 425 448 425 448 0.98

13 16 0.11 13 9.9 3.8 1 23 454 477 454 477 0.98

14 16 0.082 9.6 10.3 1.5 1 23 483 506 483 506 0.96

15 16 0.0042 0.48 14.4 2.3 1 23 512 535 512 535 0.96

16 16 0.07 8.1 10.5 2.4 1 23 541 564 541 564 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0006	0.07	17.0	2.0	1	23	19	42	19	42	0.96
2	16	0.16	18	9.4	4.5	1	23	108	131	108	131	0.97
3	16	0.0021	0.25	15.3	4.2	1	23	137	160	137	160	0.98
4	16	0.00068	0.08	16.9	3.4	1	23	195	218	195	218	0.98
5	16	0.05	5.8	11.0	1.4	1	23	224	247	224	247	0.98
6	16	0.0014	0.17	15.9	2.0	1	23	253	276	253	276	0.98
7	16	0.022	2.6	12.1	1.8	1	23	282	305	282	305	0.98
8	16	0.03	3.5	11.7	0.9	1	23	309	332	309	332	0.93
9	16	0.0029	0.33	14.9	0.5	1	23	338	361	338	361	0.98
10	16	0.00039	0.045	17.6	3.3	1	23	367	390	367	390	0.98
11	16	0.0063	0.74	13.8	1.4	1	23	396	419	396	419	0.98
12	16	0.0011	0.12	16.3	0.8	1	23	425	448	425	448	0.98
13	16	0.11	13	9.9	3.8	1	23	454	477	454	477	0.98
14	16	0.082	9.6	10.3	1.5	1	23	483	506	483	506	0.96
15	16	0.0042	0.48	14.4	2.3	1	23	512	535	512	535	0.96
16	16	0.07	8.1	10.5	2.4	1	23	541	564	541	564	0.98

Sequence Information

Coding Sequence: ATGTACAACGCCGAGTTCAGGCACCACACTAACGAACATTACAAGGCGAAAATGCACAAATGCGGAATTTGTGGTCGAAGATATAAGGGGAAGAAGTCTCTCAAGACGCACGTGGAAAAAATTCATATTAACAATGAAGGAAGAGATATCCAAAAATATTCTGCGGGTAGCTATTCCAAAGCTAATCAAAATACGAAGCAGAAGTCTACACATTCACAGGATGGTGAAAAAGAATGTCAATGCACGAAATGCAAGTTCCAAACAAGGCACAGATGTCACTTAAAATCACTTATAAAACTAAAAGATTTGAACAAAGGCAAATATAAGTGCGCAAATTGCGAGTTTAAGACATATTACCGGACTTGTTTAGAAAGGCACATGAAAATAAACCATCTCATGGAAAGTAATTATAAATGCGCAGAGTGTCAATTCGAAACAAAGCACAAGTCAAGTTTAAAAAATCACATAAAGTCAAAACATCTTAAATTACACGATTATAGATGCATGGAGTGTGAATATCAGACGAACACCAAGAGAGACGTAGAAATATACACGAAAGCAAAACATCTTAAATTACACGATTATAAATGCGTGGAGTGTAATTACCGGACGAACAAAAAGTATAATTTGAAAACACACATAAAGTCAAGACATCTTAACTTACGCGATTATAAATGCATGGAGTGTGAATACCAGGCGAACTTCAAGAAAGACTTAGAAAATCACATAAAGAGAAAACATCTTAAATTATGCGATTATCAGTGCATGGAGTGTGAATACCAAACGAACTTTAAGTCAAGTTTAGAAAAACACATAAAGACAAGACATCTTAAATCAAGCGATTATAAATGCATGGAGTGTGAATACCAGACGAACTACAAGACAGAATTAGGAAAACACATAAAGACAAAACATCTTAAATTACACGATTGCATGGAGTGTGAATACCAGACAAACAACAAGGCAGATTTAGAAAAACACATAAAGGCAAAACATCTTAAATTATACGATTATAAATGCATGGATTGTGAATACCAAACGATCAGCAAGGCAGATTTGGAAACACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGATTACCAGACGAACTTTAAGTCAAGTTTAAAAAGACACATAAAGACAAAACATCTTAAATCATGGGATTATAAATGCATGGAGTGTGAATACCAAACGAACTTCAAGGCAAATTTGGAAACACACATAAAGTCTAAACATCTCAAATTACACGATTACAAATGCGTAGAGTGTAATTACCGGACGAACAAAAAGGCTAGTTTGGAAACACACATAAAGTCTATACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAACACCAGACGAACATCAAGGCACATTTGGAAAGACACATAAAGTCAAAACATCTTAAATTATTCGATTATAAATGCATGGAGTGTGAATACCAGACGAACATCAAGAGTTACTTAGAAAGACATACGAAAGCAAAACATATTAAATTACGCGATTATAAATGCACGGAGTGTGACTTCCAGACGAACTTCAAGAGTAACTTAGAAAGTCACACGAAAGCGAAGCATCTTAAATTACACAATTATAAATGCATGGAGTGTGAATTCAAGACGAACTACAAGAATAATTTAGGGCAACACATAAAAAGAAAGCATCTTAAAGCTGTTATCTCACAAACGTGA
Protein Sequence: MYNAEFRHHTNEHYKAKMHKCGICGRRYKGKKSLKTHVEKIHINNEGRDIQKYSAGSYSKANQNTKQKSTHSQDGEKECQCTKCKFQTRHRCHLKSLIKLKDLNKGKYKCANCEFKTYYRTCLERHMKINHLMESNYKCAECQFETKHKSSLKNHIKSKHLKLHDYRCMECEYQTNTKRDVEIYTKAKHLKLHDYKCVECNYRTNKKYNLKTHIKSRHLNLRDYKCMECEYQANFKKDLENHIKRKHLKLCDYQCMECEYQTNFKSSLEKHIKTRHLKSSDYKCMECEYQTNYKTELGKHIKTKHLKLHDCMECEYQTNNKADLEKHIKAKHLKLYDYKCMDCEYQTISKADLETHIKSKHLKLHDYKCMECDYQTNFKSSLKRHIKTKHLKSWDYKCMECEYQTNFKANLETHIKSKHLKLHDYKCVECNYRTNKKASLETHIKSIHLKLHDYKCMECEHQTNIKAHLERHIKSKHLKLFDYKCMECEYQTNIKSYLERHTKAKHIKLRDYKCTECDFQTNFKSNLESHTKAKHLKLHNYKCMECEFKTNYKNNLGQHIKRKHLKAVISQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00990462;
90% Identity: -
80% Identity: -