Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010002274.1:312888-314357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.9e-06 0.0012 22.7 1.2 1 23 30 53 30 53 0.97

2 14 0.0057 0.67 14.0 3.1 1 23 112 135 112 135 0.98

3 14 0.00039 0.045 17.6 3.9 1 23 142 165 142 165 0.98

4 14 0.00054 0.063 17.2 1.6 1 23 171 194 171 194 0.98

5 14 0.012 1.4 13.0 2.1 1 23 200 223 200 223 0.98

6 14 0.031 3.6 11.7 0.7 1 23 229 252 229 252 0.98

7 14 0.023 2.7 12.0 1.0 1 23 257 280 257 280 0.97

8 14 0.0013 0.15 16.0 0.6 1 23 286 309 286 309 0.98

9 14 0.011 1.2 13.1 0.4 1 23 315 338 315 338 0.98

10 14 0.00017 0.02 18.8 3.6 1 23 344 367 344 367 0.98

11 14 0.017 2 12.5 1.1 1 23 373 396 373 396 0.98

12 14 2 2.3e+02 6.0 0.4 8 23 411 426 406 426 0.80

13 14 0.018 2.2 12.4 0.5 1 23 432 455 432 455 0.98

14 14 0.48 56 7.9 0.7 1 23 461 484 461 484 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.9e-06	0.0012	22.7	1.2	1	23	30	53	30	53	0.97
2	14	0.0057	0.67	14.0	3.1	1	23	112	135	112	135	0.98
3	14	0.00039	0.045	17.6	3.9	1	23	142	165	142	165	0.98
4	14	0.00054	0.063	17.2	1.6	1	23	171	194	171	194	0.98
5	14	0.012	1.4	13.0	2.1	1	23	200	223	200	223	0.98
6	14	0.031	3.6	11.7	0.7	1	23	229	252	229	252	0.98
7	14	0.023	2.7	12.0	1.0	1	23	257	280	257	280	0.97
8	14	0.0013	0.15	16.0	0.6	1	23	286	309	286	309	0.98
9	14	0.011	1.2	13.1	0.4	1	23	315	338	315	338	0.98
10	14	0.00017	0.02	18.8	3.6	1	23	344	367	344	367	0.98
11	14	0.017	2	12.5	1.1	1	23	373	396	373	396	0.98
12	14	2	2.3e+02	6.0	0.4	8	23	411	426	406	426	0.80
13	14	0.018	2.2	12.4	0.5	1	23	432	455	432	455	0.98
14	14	0.48	56	7.9	0.7	1	23	461	484	461	484	0.97

Sequence Information

Coding Sequence: ATGTACAAATATACACAATGCAAGTTCAGAACAATATACAACGCCGACTTCAGACACCACACTAACAAGCATTACAGGATGAAAACGTACAAATGTGGAATCTGTGACAGAAGATACAAGACGAAGAAATCTTTGAAGGCGCATCTGGAAAAAATTCACGCCGACAACGAAGGAAGAGATGCTGAGAAACACTCTAGCTGTAACTATTTCAAAGCAACTGTTAAAAATATGAAAGGGACATCTTCATGTTCACGACAATGTAAATGTTCCAAATGCAAATTTCAAGCAAGGAAGAAGTATCGCTTAAAATCGCGTATAAAAATAAGACGCACATATAAATGCGGAGATTGCGAGTTTAAGACATATTACAGGACTTATCTAGAAAAGCACATGAAAATGAAACATCTCTTGACGGTTAGTTATTATAAATGCACGGAGTGTGAATACCAGACAAAGAACAAATACTATTTAAAATCACATATAAAGACAAAACATCTGAAGCAAAGTGATTATAAATGCGCAGAGTGTGAATACCAGACAAATTTCAAGTCAAATTTAGAAAGACATGTAAAAACAAGACATCTAAAACAGAAGGATTACAAATGCACAGAGTGTGAATTCCAGGCAAATTTCAAGTCATACTTGCAACTACACATAAGGAGAAAACATCTGAAGAAACAGGATTATAAATGCGCCGAGTGTGAATACCAGACAAATTACAAGCCATATTTACTAGTACATATCAAAAGCAAACATATGGAACATGATTATAATTGTGCAGAGTGTGAATTCAATACAAACTACAAGTCAGTCTTAGAGAAACACATCAAAACGAAACATATGAAGCAAAAGAATTATAAATGCGCAGAGTGTGAATACCAGGCAAATTACAAGTCAAATTTAAAAGTACACATCAAAATAAAACATATGAAACAAATGGATTATAAATGTGCAGAGTGTGAATTAATTACAAACTATAAGTCAGTCTTGGAGACACACATCAAAACGAAACATATGAGTCAAAAGGATTATAAATGCACAGAGTGTGGATACCGGACACATTACAAGTCAAATTTACAAGTGCACGTAAAAACACAACATATGAAACAAAAGGATTATAAATGCCCGGAGTGTGAATTCCTTACAAACTACAAGCCATTCTTAGAGAAACACATAAAAACGAAACATCTGAAACAAAAGGATTATGAACGCAGCACAGAGTGTGAAGACAAGACGTACTTCAAGTCGCATTTAGAAGGACACATGAAAACGGAACATAGGAGTCAAAAGGATTATAAATGCGCCGAGTGTGAATACCAGGCAAATTACAAGCCATACTTACAAGTACACATAAAAACAAAACATCTGAGACAAAAGGATTATAAATGTGCAGAGTGTGAATTCAACACGGCCTGGAAGTCAAGTTTAAAAGAACATGTAAAAAGAAAACATGTGAAACAAAACGATTAA
Protein Sequence: MYKYTQCKFRTIYNADFRHHTNKHYRMKTYKCGICDRRYKTKKSLKAHLEKIHADNEGRDAEKHSSCNYFKATVKNMKGTSSCSRQCKCSKCKFQARKKYRLKSRIKIRRTYKCGDCEFKTYYRTYLEKHMKMKHLLTVSYYKCTECEYQTKNKYYLKSHIKTKHLKQSDYKCAECEYQTNFKSNLERHVKTRHLKQKDYKCTECEFQANFKSYLQLHIRRKHLKKQDYKCAECEYQTNYKPYLLVHIKSKHMEHDYNCAECEFNTNYKSVLEKHIKTKHMKQKNYKCAECEYQANYKSNLKVHIKIKHMKQMDYKCAECELITNYKSVLETHIKTKHMSQKDYKCTECGYRTHYKSNLQVHVKTQHMKQKDYKCPECEFLTNYKPFLEKHIKTKHLKQKDYERSTECEDKTYFKSHLEGHMKTEHRSQKDYKCAECEYQANYKPYLQVHIKTKHLRQKDYKCAECEFNTAWKSSLKEHVKRKHVKQND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -