Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010001525.1:981896-983590[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0004 0.046 17.6 0.9 1 23 40 63 40 63 0.94

2 16 0.086 10 10.3 2.4 1 23 101 124 101 124 0.96

3 16 0.0082 0.96 13.5 2.3 1 23 130 153 130 153 0.98

4 16 0.28 32 8.7 5.2 1 23 159 182 159 182 0.98

5 16 1.1 1.3e+02 6.7 4.4 1 23 188 211 188 211 0.98

6 16 0.0039 0.46 14.5 2.9 1 23 217 240 217 240 0.98

7 16 0.0017 0.19 15.7 2.1 1 23 246 269 246 269 0.98

8 16 0.0061 0.71 13.9 5.1 1 23 275 298 275 298 0.96

9 16 1.8 2.1e+02 6.1 4.1 1 23 304 327 304 327 0.97

10 16 0.0058 0.68 13.9 3.7 1 23 357 380 357 380 0.98

11 16 0.011 1.3 13.1 1.6 1 23 386 409 386 409 0.98

12 16 0.0023 0.27 15.2 4.7 1 23 415 438 415 438 0.96

13 16 0.024 2.8 12.0 3.7 1 23 444 467 444 467 0.98

14 16 0.015 1.7 12.7 0.8 1 23 473 496 473 496 0.98

15 16 0.00056 0.066 17.1 2.5 1 23 502 525 502 525 0.98

16 16 0.0046 0.54 14.3 3.3 1 23 531 554 531 554 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0004	0.046	17.6	0.9	1	23	40	63	40	63	0.94
2	16	0.086	10	10.3	2.4	1	23	101	124	101	124	0.96
3	16	0.0082	0.96	13.5	2.3	1	23	130	153	130	153	0.98
4	16	0.28	32	8.7	5.2	1	23	159	182	159	182	0.98
5	16	1.1	1.3e+02	6.7	4.4	1	23	188	211	188	211	0.98
6	16	0.0039	0.46	14.5	2.9	1	23	217	240	217	240	0.98
7	16	0.0017	0.19	15.7	2.1	1	23	246	269	246	269	0.98
8	16	0.0061	0.71	13.9	5.1	1	23	275	298	275	298	0.96
9	16	1.8	2.1e+02	6.1	4.1	1	23	304	327	304	327	0.97
10	16	0.0058	0.68	13.9	3.7	1	23	357	380	357	380	0.98
11	16	0.011	1.3	13.1	1.6	1	23	386	409	386	409	0.98
12	16	0.0023	0.27	15.2	4.7	1	23	415	438	415	438	0.96
13	16	0.024	2.8	12.0	3.7	1	23	444	467	444	467	0.98
14	16	0.015	1.7	12.7	0.8	1	23	473	496	473	496	0.98
15	16	0.00056	0.066	17.1	2.5	1	23	502	525	502	525	0.98
16	16	0.0046	0.54	14.3	3.3	1	23	531	554	531	554	0.97

Sequence Information

Coding Sequence: ATGGACAAGCCTAAAAGACGGTTACGTAAAATATACAAAAGCACGCAGTACAAATACAAAACAACATACAAACACAACCCCATGGATCAGACTAACAAGCATTACGACGGAAAAGTGTTCAGGTGTGGAATTTGTTACAAAAGATTCAAGAAAAGAGATTCTCTTGAGTCACACGTGGAAAATATTCATATTGCTATTAAACAAAAGGCAAAGCAAAAGTTTTACGAGCAGGGCTTTCGAAAAGTTAATATCAAAAATATAAAAGAAGAAACTTTAAATTCGCATAATAAAGTAAAACAATTTGAATGTTTGATTTGCAAGTTCCAGACAAACAAAAAATACTCTTTAAAATTACACATAAAACTAAAGCATCTCAAAGCAAGCGATTATAACTGCATGCACTGTGAATACAAGACAAACTTCAAAGCGAATTTAGCAGCACACATAAAAACGAAACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATACAAGACAAGCTGCAAGTCACATTTAACAGTACACGTAAAAACAGAACATCTTAAAGAAAGCGATTATGAATGTATGAAGTGTCAGTACAAGACAAATTGGAAATCGTGTTTGAAAATACACATAAAAACAAAACATCTTAAAGAAAGCGACTATAAATGCGTGGAGTGTGAATATAAGACAAACCACAAATTGGATTTAGAGAGGCACATAAAGACAAAACATCTTAAAGAACGTGATTATAAATGCATGGAATGTGAATATAAGACAAATTACAAAATAGATTTACAGAGACACATAAAAACAAAACATCTCAAAGAATGTGATTATAAATGCAGGGAGTGTGAATACAAGACAAATCACAAATCAACTTTTGAAAGACACATGAAAGCAAAACATCTTAAAAAAAGCGGCTATAAATGCAGGGAGTGTGAATTCGAGACAAATTACAAATCAAGTTTAAAGTTCCACACAAAAACAAAACATCTTAAAGAAAACGATTGTGTAAACAAGACAGATCGTGAAGCAGACTTGAACAAACACATAGAAATGAAACATCTTAAAGTCTGCGATTATAAATGCATGGAGTGTGAATACAAGACAAATTACAAATCTTGTTTAGAAGCACACATAAAAACAAAACATCTTAAAGAATGCGATTATAAATGCATGGAGTGTGAATATAAGACAAACTATAAAATAGATTTAGATAGGCACATAAAAACAAAACATCTTAAAGAATGTGATTACAAATGCACGGTGTGTGAATACAAGACAAATCACAAATCAACTTTTGAAAGACACATGAAAGCAAAACATCTTAAGGAAAGCGAATATAAATGCATGGAGTGTGAATTCAAGACAAATTACAAATCAAGTTTAAAGTTACACACAAAAACAAAACATCTTAAAGAAAACTATTATGAATGCATGACGTGTGAATACAAGACAAACTACAAGACAAGCTTAGAAGCACACGTAAAAACGGAACATCTTAAAGAAAGCGACTATAAATGCACGGAGTGTGAATATGAGACAAACCATAAAATAGATTTAGAGAGACACATAAAAACGAAACATCTTAAAGAATGCGATTATAAATGCATGGAGTGTGAATACAAGACAAATTATAAATCAAATTTTGAAAGGCACACGAAAGTAAAGCATTTTAAAGAATGTGATTATAAATCCACAGTGTGA
Protein Sequence: MDKPKRRLRKIYKSTQYKYKTTYKHNPMDQTNKHYDGKVFRCGICYKRFKKRDSLESHVENIHIAIKQKAKQKFYEQGFRKVNIKNIKEETLNSHNKVKQFECLICKFQTNKKYSLKLHIKLKHLKASDYNCMHCEYKTNFKANLAAHIKTKHLKQKDYKCMECEYKTSCKSHLTVHVKTEHLKESDYECMKCQYKTNWKSCLKIHIKTKHLKESDYKCVECEYKTNHKLDLERHIKTKHLKERDYKCMECEYKTNYKIDLQRHIKTKHLKECDYKCRECEYKTNHKSTFERHMKAKHLKKSGYKCRECEFETNYKSSLKFHTKTKHLKENDCVNKTDREADLNKHIEMKHLKVCDYKCMECEYKTNYKSCLEAHIKTKHLKECDYKCMECEYKTNYKIDLDRHIKTKHLKECDYKCTVCEYKTNHKSTFERHMKAKHLKESEYKCMECEFKTNYKSSLKLHTKTKHLKENYYECMTCEYKTNYKTSLEAHVKTEHLKESDYKCTECEYETNHKIDLERHIKTKHLKECDYKCMECEYKTNYKSNFERHTKVKHFKECDYKSTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -