Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000622.1:586138-588009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.36 42 8.3 4.6 1 23 2 24 2 24 0.99

2 19 0.00015 0.017 19.0 0.5 1 23 30 53 30 53 0.96

3 19 0.12 15 9.8 2.8 1 23 120 143 120 143 0.98

4 19 1.1 1.3e+02 6.8 1.7 2 23 151 173 150 173 0.97

5 19 0.072 8.4 10.5 2.1 1 23 179 202 179 202 0.98

6 19 0.00084 0.098 16.6 0.8 1 23 208 231 208 231 0.98

7 19 0.31 36 8.5 2.5 1 23 237 260 237 260 0.95

8 19 0.0082 0.96 13.5 1.0 1 23 266 289 266 289 0.96

9 19 0.00058 0.068 17.1 1.6 1 23 295 318 295 318 0.98

10 19 0.31 36 8.5 1.7 1 23 324 347 324 347 0.95

11 19 0.0046 0.53 14.3 1.2 1 23 353 376 353 376 0.98

12 19 1.2 1.4e+02 6.6 0.4 1 23 382 405 382 405 0.95

13 19 0.023 2.7 12.1 0.8 1 23 411 434 411 434 0.96

14 19 0.072 8.4 10.5 2.1 1 23 440 463 440 463 0.98

15 19 0.00084 0.098 16.6 0.8 1 23 469 492 469 492 0.98

16 19 0.16 19 9.4 1.8 1 23 498 521 498 521 0.98

17 19 0.0013 0.15 16.0 0.5 1 23 527 550 527 550 0.98

18 19 0.18 21 9.2 2.6 2 23 557 579 554 579 0.93

19 19 0.001 0.12 16.3 0.4 1 21 585 605 585 606 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.36	42	8.3	4.6	1	23	2	24	2	24	0.99
2	19	0.00015	0.017	19.0	0.5	1	23	30	53	30	53	0.96
3	19	0.12	15	9.8	2.8	1	23	120	143	120	143	0.98
4	19	1.1	1.3e+02	6.8	1.7	2	23	151	173	150	173	0.97
5	19	0.072	8.4	10.5	2.1	1	23	179	202	179	202	0.98
6	19	0.00084	0.098	16.6	0.8	1	23	208	231	208	231	0.98
7	19	0.31	36	8.5	2.5	1	23	237	260	237	260	0.95
8	19	0.0082	0.96	13.5	1.0	1	23	266	289	266	289	0.96
9	19	0.00058	0.068	17.1	1.6	1	23	295	318	295	318	0.98
10	19	0.31	36	8.5	1.7	1	23	324	347	324	347	0.95
11	19	0.0046	0.53	14.3	1.2	1	23	353	376	353	376	0.98
12	19	1.2	1.4e+02	6.6	0.4	1	23	382	405	382	405	0.95
13	19	0.023	2.7	12.1	0.8	1	23	411	434	411	434	0.96
14	19	0.072	8.4	10.5	2.1	1	23	440	463	440	463	0.98
15	19	0.00084	0.098	16.6	0.8	1	23	469	492	469	492	0.98
16	19	0.16	19	9.4	1.8	1	23	498	521	498	521	0.98
17	19	0.0013	0.15	16.0	0.5	1	23	527	550	527	550	0.98
18	19	0.18	21	9.2	2.6	2	23	557	579	554	579	0.93
19	19	0.001	0.12	16.3	0.4	1	21	585	605	585	606	0.95

Sequence Information

Coding Sequence: ATGTACAAATGTACGCAATGCAGGTTCAGAACAATGTACAACGCAGACTTCAAGCGTCACACTAACAAGCATTACGAGATGAAAATGTACAAATGTGGAATTTGTGGCAAAACATACAAGGCGAGGGAATCTCTGAAGATGCACGTGAAAGAAAGTCATGCCGCCAATGAAGGCAAGGATGTCGAAAAATACTCTAAATGTGACTATTCAAAAACTAACAGTTTAAATATGAAAGGGAGATCTCCGCATTCACATGATGGTGAAAAACAATGTCAATTCTCGAAATGCGTATTTAAAACAAGGGACAAATGCCACTTAAAATCGCTTATAAAAATAAGACATCTGAACAGAGGCAAATATAAATGCGCAAATTGCGAGTTTAAGACATATTACAGGACTTACTTAGAAATGCACATGAAAATGAAACATCTCAAGATGGAAACTAATTCTAAATGCAGGGAGTGTGAATTCAAGACAAACTACAAGTCAATCTTAGAAAGACACGTAAAAACAAACCATCCCAAGCAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACACACAACACGTCTTACTTGGAAGTGCACGTAAAAACAAAACATCTGAAACAACATGACTATAAATGCCTAGAGTGTGAATATCAGACAGACAAGAAGTCAAACTTAGAAGTGCACATAAACACAAAACATCTTAAACAAAAGAGTTACAAGTGCATGACGTGTGAATTCAAGACAAACTACAAGTCAGTCTTAAAAAGGCACGTAAAAGCAAAACATCTCAAGGAAAATGATTACAAATGCACAGAGTGTGAATACCAGACGAACTACAAGCAAAGTTTAGAAGTGCACATAAAAGCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACAAGAAGTCAAACTTAAAACTGCACATAAACACAAAACATCTTAAACAAAAGAGTTACAAGTGCATGACGTGTGAATTCAAGACAAACTACAAGTCAGTCTTAGAAAGACACGTAAAAGCAAAACATCTCAAGCAAAATGATTATAAATGCACAGAGTGTGAATACCAGACGAACTACAAGTTAAGCTTAGAAGCGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCGGTATGTGAATACCAGACAAACTACATGTCAGTCTTAAAAGTACACGTAAAAGCAAAACATCTCAAGCAAGATGATTATAAATGCGCAGAGTGTGAATACCAGGCAAAGTACAAGTCAGTCTTAAAAAGACACATAAAAGCAAAACATCTCAAGCAAAATGTTTATAAATGCGCAGAGTGTGAATACCAGACACACAACACGTCTTACTTGGAAGTGCACGTAAAAACAAAACATCTGAAACAATACGACTATAAATGCCTAGAGTGTGAATATCAGACAGACAAGAAGTCAAACTTAGAAGTGCACATAAACACAAAACATCTTAAACAATATGATTATAAGTGCGTGGAGTGTAAATTCAAGACAAACTACAAGTTAAGCTTAGAAGGGCACATAAAAACAAAACATTTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACTCCAAGTCAAACTTAGCAGTGCACGCAAAAACAAAACATCTGAAACAATTTGATTGTAAATGCGCAGAGTGTGAATACCAGACATACAATAAGTTTTACTTGGAAGTGCACGTAAAAACAAAACATCTGAAACAATATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCAAACTTAGAACGGCACGTAAAATCAAAACTTCTGAAACAAAATGATTATAAATGCGCAGAGTCAACAAGTCAAACTTAG
Protein Sequence: MYKCTQCRFRTMYNADFKRHTNKHYEMKMYKCGICGKTYKARESLKMHVKESHAANEGKDVEKYSKCDYSKTNSLNMKGRSPHSHDGEKQCQFSKCVFKTRDKCHLKSLIKIRHLNRGKYKCANCEFKTYYRTYLEMHMKMKHLKMETNSKCRECEFKTNYKSILERHVKTNHPKQNDYKCAECEYQTHNTSYLEVHVKTKHLKQHDYKCLECEYQTDKKSNLEVHINTKHLKQKSYKCMTCEFKTNYKSVLKRHVKAKHLKENDYKCTECEYQTNYKQSLEVHIKAKHLKQNDYKCAECEYQTNKKSNLKLHINTKHLKQKSYKCMTCEFKTNYKSVLERHVKAKHLKQNDYKCTECEYQTNYKLSLEAHIKTKHLKQNDYKCAVCEYQTNYMSVLKVHVKAKHLKQDDYKCAECEYQAKYKSVLKRHIKAKHLKQNVYKCAECEYQTHNTSYLEVHVKTKHLKQYDYKCLECEYQTDKKSNLEVHINTKHLKQYDYKCVECKFKTNYKLSLEGHIKTKHLKQNDYKCAECEYQTNSKSNLAVHAKTKHLKQFDCKCAECEYQTYNKFYLEVHVKTKHLKQYDYKCAECEYQTNNKSNLERHVKSKLLKQNDYKCAESTSQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -