Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010002885.1:155809-157395[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.029 3.4 11.7 0.8 1 20 2 21 2 23 0.94

2 16 0.017 2 12.5 2.4 1 23 91 114 91 114 0.97

3 16 0.071 8.3 10.5 3.0 1 23 120 143 120 143 0.95

4 16 0.00028 0.033 18.1 2.4 1 23 149 172 149 172 0.98

5 16 0.00016 0.019 18.8 1.8 1 23 178 201 178 201 0.98

6 16 0.012 1.5 12.9 1.6 1 23 207 230 207 230 0.98

7 16 0.051 5.9 11.0 0.3 1 23 236 259 236 259 0.98

8 16 0.037 4.3 11.4 4.0 1 23 265 288 265 288 0.98

9 16 0.0047 0.55 14.2 2.6 1 23 294 317 294 317 0.98

10 16 0.0012 0.14 16.1 1.5 1 23 323 346 323 346 0.98

11 16 0.025 2.9 11.9 3.0 1 23 352 375 352 375 0.98

12 16 0.017 1.9 12.5 4.3 1 23 381 404 381 404 0.98

13 16 0.00097 0.11 16.4 1.4 1 23 410 433 410 433 0.98

14 16 0.0077 0.9 13.6 0.7 1 23 439 462 439 462 0.98

15 16 0.0046 0.54 14.2 2.8 1 23 468 491 468 491 0.98

16 16 0.0086 1 13.4 2.5 1 23 497 520 497 520 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.029	3.4	11.7	0.8	1	20	2	21	2	23	0.94
2	16	0.017	2	12.5	2.4	1	23	91	114	91	114	0.97
3	16	0.071	8.3	10.5	3.0	1	23	120	143	120	143	0.95
4	16	0.00028	0.033	18.1	2.4	1	23	149	172	149	172	0.98
5	16	0.00016	0.019	18.8	1.8	1	23	178	201	178	201	0.98
6	16	0.012	1.5	12.9	1.6	1	23	207	230	207	230	0.98
7	16	0.051	5.9	11.0	0.3	1	23	236	259	236	259	0.98
8	16	0.037	4.3	11.4	4.0	1	23	265	288	265	288	0.98
9	16	0.0047	0.55	14.2	2.6	1	23	294	317	294	317	0.98
10	16	0.0012	0.14	16.1	1.5	1	23	323	346	323	346	0.98
11	16	0.025	2.9	11.9	3.0	1	23	352	375	352	375	0.98
12	16	0.017	1.9	12.5	4.3	1	23	381	404	381	404	0.98
13	16	0.00097	0.11	16.4	1.4	1	23	410	433	410	433	0.98
14	16	0.0077	0.9	13.6	0.7	1	23	439	462	439	462	0.98
15	16	0.0046	0.54	14.2	2.8	1	23	468	491	468	491	0.98
16	16	0.0086	1	13.4	2.5	1	23	497	520	497	520	0.98

Sequence Information

Coding Sequence: ATGCACAAATGTGGGATTTGTGGTGGAAAATATAAGGGGAAGAAATCTCTCAAGACGCACTTGGACAAAATTCCTATTAACAATGAAGGAAGACATATCCAAAAATATTATGTGTGTGACTATTCAAAAGGTAATAAGAATACAAAAGAGACATCTAAACATTCACACGATGGTGAAAACCAATGTCAATGCATGAAATGCATGTTTCAAACAAGGCACAGATGTCACTTAAAATCACTAATAAATATAAAAGATTTGAACAGAGGCAAATATAAGTGCGCAAATTGCGAGTTTAAGACATATTACCGAACTTATTTAGAAAGGCACATGAAAATAAACCATCTCATGGAAAGTAATTATAAATGCGCAGAGTGTCAATTCGAAACAAAGCACAAGTCAAGTTTAGGAAGACACAAAAACGCAAAACATCTTAAGTTGCACGATTATAAATGCGTGGAGTGTAATTACCGGACGAACAGAAAGTCTTATTTGGAAACACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATATCAAACGAATAGCAAGTCAAATTTGGAAAGACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGACGAACTTTAAGACAAGTTTAGAAATACACATAAAAACAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGTCGAACGTGAAGGCACTTTTGGAAATACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGACGAACTTGAAGTCATGTTTAGAAAAACACATAAAGACAAAACATCTTAAATCAAGCGATTTTAAGTGCATGGAGTGTGAATACCAGACGAACTTCAAGTCAAATTTAGATAAACACATAAAGACAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGACGAACGTTAAGTCAAGTTTAGAAAAACACATAAAGACAAAGCATCTTAAATCAAGCGATTTTAAGTGCATGCAGTGTGAATACCAGACGAACTTCAAGTCAAATTTAGATAAACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCACACGAACTTCAAGTCAAATTTAGATAAACACATAAAGTCAAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGACGAACAATAAGGCAAATTTGGAAAGACACGTAAAGAGAAAACATCTTAAATTATACGATTATCAATGCATGGATTGTGAATACCAAACGATCAACAAGGCAGAATTGGAAACACACACAAAATCCAAACATCTTAAATTACACGATTATAAATGCATGGAGTGTGAATACCAGACGAATTACAAGAAAAACTTAAAAATTCACATAAAGAGAAAACATCTTAAATTATGGGATTATAAATGCATGGAGTGTGAATACCAGACGAACTACAAGAATAGTTTAGAAAAACACATAAAGAGAAAACATCTTAAAGCTGTTGTCTCACAAACGTGA
Protein Sequence: MHKCGICGGKYKGKKSLKTHLDKIPINNEGRHIQKYYVCDYSKGNKNTKETSKHSHDGENQCQCMKCMFQTRHRCHLKSLINIKDLNRGKYKCANCEFKTYYRTYLERHMKINHLMESNYKCAECQFETKHKSSLGRHKNAKHLKLHDYKCVECNYRTNRKSYLETHIKSKHLKLHDYKCMECEYQTNSKSNLERHIKSKHLKLHDYKCMECEYQTNFKTSLEIHIKTKHLKLHDYKCMECEYQSNVKALLEIHIKSKHLKLHDYKCMECEYQTNLKSCLEKHIKTKHLKSSDFKCMECEYQTNFKSNLDKHIKTKHLKLHDYKCMECEYQTNVKSSLEKHIKTKHLKSSDFKCMQCEYQTNFKSNLDKHIKSKHLKLHDYKCMECEYHTNFKSNLDKHIKSKHLKLHDYKCMECEYQTNNKANLERHVKRKHLKLYDYQCMDCEYQTINKAELETHTKSKHLKLHDYKCMECEYQTNYKKNLKIHIKRKHLKLWDYKCMECEYQTNYKNSLEKHIKRKHLKAVVSQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -