Mmel076981.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010000645.1:508798-510519[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00052 0.061 17.2 1.9 1 23 19 42 19 42 0.96
2 16 0.2 23 9.1 2.6 1 23 109 132 109 132 0.97
3 16 0.0008 0.093 16.7 1.5 1 23 159 182 159 182 0.98
4 16 2.7e-05 0.0031 21.3 3.2 1 23 189 212 189 212 0.98
5 16 0.00017 0.02 18.7 1.5 1 23 218 241 218 241 0.96
6 16 0.0027 0.31 15.0 2.5 1 23 247 270 247 270 0.98
7 16 0.0051 0.59 14.1 3.2 1 23 276 299 276 299 0.98
8 16 0.14 16 9.6 3.5 1 23 305 328 305 328 0.97
9 16 0.024 2.8 12.0 1.9 1 23 334 357 334 357 0.98
10 16 0.00018 0.021 18.7 1.3 1 23 364 387 364 387 0.98
11 16 0.036 4.2 11.5 2.2 1 23 393 416 393 416 0.95
12 16 0.0021 0.24 15.3 2.5 1 23 422 445 422 445 0.98
13 16 0.0019 0.23 15.4 1.8 1 23 451 474 451 474 0.98
14 16 0.0041 0.48 14.4 1.5 1 23 481 504 481 504 0.97
15 16 0.045 5.2 11.2 1.9 1 23 510 533 510 533 0.97
16 16 0.057 6.6 10.8 5.6 1 23 539 562 539 562 0.98

Sequence Information

Coding Sequence
ATGTACAACACCGACTTCAGGCACCACTCTAATCAGCATTACGAGATAAAAATGTACAAATGTGGAATTTGTTACAGAAAATATAAGACGAAGGGATCTCTCAAGACGCACCTGGTAAAAATGCATGGTGACAATGAAGGAAAAAATGTTCAAAATTACTTGATGTGTGCCAATTTCAAAGTAAATATTACAAATATAAAGGCGATATCTCTACACTCACATGATGGTGAAAAACAATGCCAATCGTCGAAATGCAACTTTCATACAATTGACAAATGTCACTTAAAATCATATATGTCAATAAAGCATCTGAATCGAGGTAAATATAAGTGCGTAAATTGCGAGTTTAAGACATATTACAGGACTTATTTAGAAAGACACGTGAAAATAAAACATCTAAGCCAAGACACAGAGTGTGACTACCAGACGAACTCCAAGTCATATTTGAAGACAAAACGTCTTAAATTAAGCGATTACAAATGCATGGAATGTGAATACGAGGCGAACTTCAAGTCAAACTTGAAACAACATATAAGAACAAAACATTTGTTGAATCAAGATAATTATAAATGCAAAGAATGCGAATTCACGACAAAGTACAAGTCAAATTTAGAAAAACACATGAAAGTAAAACATATTAAAGAAAATAATTATAAATGCAAGGAGTGTGGATACAAGACAATTTACAAGTCAAGCTTAGAAAAACACGTAAAAGCTAAACATCTGAAAGAAAAGGAGTATAATTGCACGAATTGTGAGTACAAGACGAACTTCAAGTCAAGTCTACAAGTTCACATCAAGACAAAGCATCTTAAATTAAGCGATTATAAATGCATGCAGTGTGAATACCAGACGAACTTCAAGTCAAACTTGAAACTACACATAAAGACAAAACACCTTCTGTTAAACGATTATAAATGCATTGAGTGTGAATACCAGACGAACTTCAAGTCACATTTACAGGTACACATCAAACGAAAGCATCTCAAAGAAAACGAATACAAATGCATGGAGTGTGAATACCAGACGAAGTTCAAGTTAAATTTGGAACTGCACATTAAAACAAAACATTTGTTGAACCAAAAGGATTATAAATGCACGGAGTGTGAATTTAAAACAAACTACAAGTCAAATTTAGAAGCACACATTAAAGTAAAACATCTTAAAGAAAATGATTATAAATGCATGGAGTGTGAATTCAGGACGTTTTACAAGTCAAACTTGGATAAACATATAAAAGCAAAACATCTGAAGGAAAAAGATTACAAATGCTCAGAGTGTGAATTCAAAACAAACTACAAGTCATATTTGGAACTACATATAAAGACAAAACATCTTAAATTGAGCGATTATAAATGCATGGAGTGTGAATACCAGACGAACTTCAAGTCTAATTTGGAACTACACATAAAAACAAAACATTTGTTGAATCAAAAGGATTATAAATGCGGAGAATGTGAATTCAGGACAAACTACAAGTCAAATTTAGATAAACATGTAAAAGTAAAGCATCTTAAAGAAAATAATTATAAATGCATAAAGTGTGAATTTAAAACGAATTACAAGTCAAGTTTAGAAGCACACATAAAGACGAAACATCTGAAACAAAAGGATTATAAATGCACAGAATGTGAATTCAAGACAAACTATACGTCACATTTAAAATCGCACGTAAAGAGAAAACATTTTAAATTAACCGATGCAGTGATTGGGAACACATGA
Protein Sequence
MYNTDFRHHSNQHYEIKMYKCGICYRKYKTKGSLKTHLVKMHGDNEGKNVQNYLMCANFKVNITNIKAISLHSHDGEKQCQSSKCNFHTIDKCHLKSYMSIKHLNRGKYKCVNCEFKTYYRTYLERHVKIKHLSQDTECDYQTNSKSYLKTKRLKLSDYKCMECEYEANFKSNLKQHIRTKHLLNQDNYKCKECEFTTKYKSNLEKHMKVKHIKENNYKCKECGYKTIYKSSLEKHVKAKHLKEKEYNCTNCEYKTNFKSSLQVHIKTKHLKLSDYKCMQCEYQTNFKSNLKLHIKTKHLLLNDYKCIECEYQTNFKSHLQVHIKRKHLKENEYKCMECEYQTKFKLNLELHIKTKHLLNQKDYKCTECEFKTNYKSNLEAHIKVKHLKENDYKCMECEFRTFYKSNLDKHIKAKHLKEKDYKCSECEFKTNYKSYLELHIKTKHLKLSDYKCMECEYQTNFKSNLELHIKTKHLLNQKDYKCGECEFRTNYKSNLDKHVKVKHLKENNYKCIKCEFKTNYKSSLEAHIKTKHLKQKDYKCTECEFKTNYTSHLKSHVKRKHFKLTDAVIGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-