Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010005974.1:3337271-3339154[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.21 24 9.1 0.2 3 23 21 42 19 42 0.95

2 17 0.11 13 9.9 1.3 1 23 107 130 107 130 0.98

3 17 0.0046 0.54 14.3 2.1 1 23 136 159 136 159 0.97

4 17 0.0089 1 13.4 0.4 1 23 172 195 172 195 0.96

5 17 7.8e-05 0.009 19.8 0.9 1 23 201 224 201 224 0.98

6 17 0.043 5 11.2 4.1 1 23 230 253 230 253 0.98

7 17 0.74 86 7.3 0.7 1 23 259 282 259 282 0.95

8 17 2.6e-05 0.0031 21.3 2.5 1 23 288 311 288 311 0.98

9 17 0.043 5 11.2 4.1 1 23 317 340 317 340 0.98

10 17 0.0084 0.98 13.4 1.1 1 23 346 369 346 369 0.96

11 17 0.00036 0.041 17.8 1.3 1 22 375 396 375 396 0.97

12 17 0.026 3.1 11.9 2.9 1 23 404 427 404 427 0.98

13 17 0.096 11 10.1 1.0 1 23 433 456 433 456 0.96

14 17 0.0034 0.39 14.7 0.9 1 23 462 485 462 485 0.96

15 17 0.02 2.3 12.3 0.4 1 21 491 511 491 512 0.97

16 17 0.0021 0.24 15.3 0.5 1 23 520 543 520 543 0.96

17 17 0.0053 0.62 14.1 1.3 1 23 549 572 549 572 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.21	24	9.1	0.2	3	23	21	42	19	42	0.95
2	17	0.11	13	9.9	1.3	1	23	107	130	107	130	0.98
3	17	0.0046	0.54	14.3	2.1	1	23	136	159	136	159	0.97
4	17	0.0089	1	13.4	0.4	1	23	172	195	172	195	0.96
5	17	7.8e-05	0.009	19.8	0.9	1	23	201	224	201	224	0.98
6	17	0.043	5	11.2	4.1	1	23	230	253	230	253	0.98
7	17	0.74	86	7.3	0.7	1	23	259	282	259	282	0.95
8	17	2.6e-05	0.0031	21.3	2.5	1	23	288	311	288	311	0.98
9	17	0.043	5	11.2	4.1	1	23	317	340	317	340	0.98
10	17	0.0084	0.98	13.4	1.1	1	23	346	369	346	369	0.96
11	17	0.00036	0.041	17.8	1.3	1	22	375	396	375	396	0.97
12	17	0.026	3.1	11.9	2.9	1	23	404	427	404	427	0.98
13	17	0.096	11	10.1	1.0	1	23	433	456	433	456	0.96
14	17	0.0034	0.39	14.7	0.9	1	23	462	485	462	485	0.96
15	17	0.02	2.3	12.3	0.4	1	21	491	511	491	512	0.97
16	17	0.0021	0.24	15.3	0.5	1	23	520	543	520	543	0.96
17	17	0.0053	0.62	14.1	1.3	1	23	549	572	549	572	0.98

Sequence Information

Coding Sequence: ATGTACAACGCTGACTTCAGGCATCACACTAACAAACACTACAAGGTGAAAATGTACGGATGTGGAATTTGTCGCAGAAGATACAAGGCTAAGGAATCTCTCGAGTTGCATGTGGAAAAAATTCATGCTGGCAATGAAGGAAGAGATGTCCAAAAATACCCCACGTGTAACTATTTCAAAGCGAATATTAAAAATGTGAAAGGGAGATCTCCACGCTCACATGGTGATAAAAAACTATGTCATTCCTCGACATGGAAACGTGAAGCAAGGAACAAATGTCACCCAAGATCACAAATTAAACATCTCAACAGAGGCAAATATAAGTGCGCAAGTTGCGAGTTTAAGACTGATTACAGGAATTACTTAGAAAGGCACATCAAAATAAACCACCTCAAGGATACTATTTATAAATGCTCAGAGTGTGAATACATGACAAACATCAAGTCATATTTAAAGAACCACATGCACATAATCCACAACCACATAAAACCAAAACATTTGAAACGACATGATTATAAATGCTCAGAGTGTGAATACAAAGCGGTCTACAAGATCACTTTGCAAAGACACATAAAAGCAATACATCAGAAACAATATGATTATAAATGCCCAGAGTGTGAATACGAGACAAACTACAAGGCAAATTTAAAAACACACATAAACACAAAACATCTTAAATCATGGGATTATAAATGCATGGAGTGTGAATACCAGACAAACTTCAAGGTACATTTAAAAAATCACATAAAGTCAAAACATCTAAAACAGTGTGATTATAAATGCACGGAGTGTGAATACCAGACAAACTACATGTTAAGTTTTCAAGATCACATTAAGGCAATACATAAAAAACAAAATTATTATAAATGCTCAGAGTGTGAATACAAGACAAACAACAAGGCAAATTTAAAAAGACACATAAAAACAAAACATCTTAAATCATGGGATTATAAATGCATGGAGTGTGAATACCAGACAAACTTCAAGGTACATTTAAAAAATCACATAAAGTCAAAACATCTAAAACAGTGTGATTATAAATGCACAGAGTGTGAATACCAGACAAACTACAAGTTAAATTTGCAAGTACACATAAAGGCAAAACATCTTAAAGAAAATTATTATAAATGCTCAGAGTGTGAATACAAGACAAACTACAAGGCAAATTTAAAAAGACACATAAAAACAAAATATCTTAAATCATGGGATTATAAATGCGCAGAGTGTGAATACCAGACAGACTTCAAGGTACATTTAAAAAATCACATAAAGTCAAAACATCTAAAACAGTCTGATTATAAATGCACAGAGTGTGAATACCAGACAAACTACAAGTTAAGTTTTCAAGATCACATTAAGGCAATACATAAAAAACAAAATTATTATAAATGCTCAGAGTGTGAATACAAGACACCCGTCCAAACCTATTTAAAAAAACACATAAAGGGAATGCATCCGAAACAAAATAATTATAAATGCTCAGAGTGTCAATTCAAGACAACTGTTCCCTTATATTTAAAAAGACACATAAGAGCAATACCTCAGAAACAATATGATTATATATGCTCAGAGTGTGAATATAAGACAAATTACAAGACAAATTTGGAAAATCACATAAAAGCAATACATCAGAAACAATATAAATTTAAATGCTCAGAGTGTGAATACAAGACAAACTACGAAGGAAATTTTCTAAAACACATAAAATCAATACATCTGAAACAATATGATTATAAATGCTCTGAGTGTGAATACAAGACAAACTGCAAGCCGAGTTTAGAATGTCATACGAAAACAAAACACCTTAAGCAAGCGATTAATAATGTGCCGATTATCAATTCAAGACGAGTCGTATTTAAAATAATAAAAGTGATACAAACTTAG
Protein Sequence: MYNADFRHHTNKHYKVKMYGCGICRRRYKAKESLELHVEKIHAGNEGRDVQKYPTCNYFKANIKNVKGRSPRSHGDKKLCHSSTWKREARNKCHPRSQIKHLNRGKYKCASCEFKTDYRNYLERHIKINHLKDTIYKCSECEYMTNIKSYLKNHMHIIHNHIKPKHLKRHDYKCSECEYKAVYKITLQRHIKAIHQKQYDYKCPECEYETNYKANLKTHINTKHLKSWDYKCMECEYQTNFKVHLKNHIKSKHLKQCDYKCTECEYQTNYMLSFQDHIKAIHKKQNYYKCSECEYKTNNKANLKRHIKTKHLKSWDYKCMECEYQTNFKVHLKNHIKSKHLKQCDYKCTECEYQTNYKLNLQVHIKAKHLKENYYKCSECEYKTNYKANLKRHIKTKYLKSWDYKCAECEYQTDFKVHLKNHIKSKHLKQSDYKCTECEYQTNYKLSFQDHIKAIHKKQNYYKCSECEYKTPVQTYLKKHIKGMHPKQNNYKCSECQFKTTVPLYLKRHIRAIPQKQYDYICSECEYKTNYKTNLENHIKAIHQKQYKFKCSECEYKTNYEGNFLKHIKSIHLKQYDYKCSECEYKTNCKPSLECHTKTKHLKQAINNVPIINSRRVVFKIIKVIQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -