Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000622.1:94431-95897[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.045 5.2 11.2 2.0 1 23 2 25 2 25 0.97

2 15 0.0045 0.52 14.3 1.0 1 23 87 110 87 110 0.98

3 15 0.004 0.47 14.4 0.7 2 23 117 139 116 139 0.97

4 15 0.00039 0.045 17.6 2.2 1 23 145 168 145 168 0.98

5 15 0.043 5 11.2 4.7 1 23 174 197 174 197 0.98

6 15 0.00062 0.073 17.0 1.6 1 23 203 226 203 226 0.98

7 15 0.0033 0.38 14.7 2.4 2 23 233 255 232 255 0.95

8 15 0.0044 0.52 14.3 4.2 1 23 261 284 261 284 0.98

9 15 0.0064 0.74 13.8 1.2 1 23 290 313 290 313 0.98

10 15 0.0063 0.73 13.8 0.5 2 23 320 342 319 342 0.96

11 15 0.00086 0.1 16.5 0.9 1 23 348 371 348 371 0.98

12 15 0.00064 0.074 17.0 2.7 1 23 377 400 377 400 0.98

13 15 0.0042 0.49 14.4 0.6 2 23 407 429 406 429 0.96

14 15 0.07 8.1 10.6 0.7 2 23 436 458 435 458 0.94

15 15 0.00036 0.041 17.8 0.5 1 23 464 487 464 487 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.045	5.2	11.2	2.0	1	23	2	25	2	25	0.97
2	15	0.0045	0.52	14.3	1.0	1	23	87	110	87	110	0.98
3	15	0.004	0.47	14.4	0.7	2	23	117	139	116	139	0.97
4	15	0.00039	0.045	17.6	2.2	1	23	145	168	145	168	0.98
5	15	0.043	5	11.2	4.7	1	23	174	197	174	197	0.98
6	15	0.00062	0.073	17.0	1.6	1	23	203	226	203	226	0.98
7	15	0.0033	0.38	14.7	2.4	2	23	233	255	232	255	0.95
8	15	0.0044	0.52	14.3	4.2	1	23	261	284	261	284	0.98
9	15	0.0064	0.74	13.8	1.2	1	23	290	313	290	313	0.98
10	15	0.0063	0.73	13.8	0.5	2	23	320	342	319	342	0.96
11	15	0.00086	0.1	16.5	0.9	1	23	348	371	348	371	0.98
12	15	0.00064	0.074	17.0	2.7	1	23	377	400	377	400	0.98
13	15	0.0042	0.49	14.4	0.6	2	23	407	429	406	429	0.96
14	15	0.07	8.1	10.6	0.7	2	23	436	458	435	458	0.94
15	15	0.00036	0.041	17.8	0.5	1	23	464	487	464	487	0.96

Sequence Information

Coding Sequence: ATGTACAAATGTGGAATTTGTCGCCGAGGGCACAAAACGAGAGAATCTCTGAAGATGCACATGGAAAAAATTCATCCCGGCAATGAAAGTAGAGATGTCGGAAAACACTATATCAAAGCTAATGTTAAAAATCTAAAAGAAGGATCTCCACATTTTCACGATTGTGAAGAACAATGTAGATGCTTGAAATGCAAATTTCGCACAAGAGACAAATGTCACTTAACATCACTAAAAATAAAACATCTGAAACAAAAGAATTATAAATGCGCAAACTGTGAATACAAGGCAAACAACAAGTCAGTCTTAGAGAAACATATAAAAACGAAACATCTGAAACAAAAGAATCTTAAATGCGCAGAGTGTGAATACCAGACAAACTATAAGTCACTTCTACAAATACACATAAAAACAAAACATATGAAACAAAAGGATTATAAATGCGCAGTGTGTGAATATAAGGCAAGCAGGAAGTCAAATTTACATGTGCACATAAAGACAAAACATCTGAAACAAACGGATTTTAAATGCGCAGAATGTCAGTACCAGACGAACCACAAACAAAATTTTAAAATTCACGTAAAAACAAAACATCTGAAACAAAAGGATTTTAAATGCGCAGAGTGTGAATTCAAGACAAGCTACAAATCGGGCCTAGAAAAGCACATAAAAACTAAACATCTGAAACAAAAAGATTTAAACTGCGCAGAGTGTGAATATCGGACAAACCGCAAGTCACATTTACAACTACACATAAAATCAAAACATCTGAAACAAAATGATTTCAAATGCTCAAAGTGTGAATATCAGACAAACTACAAGTCATATTTAAAAACACACATCAAATCAAGACATCTGAAAGAAAATGATTATAAATGCGGAGAGTGTGACTACAAGACGGCCTGGAAGTCAAACTTTCAACTGCACATAAAAACAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAAACAAAACATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTTCAAGTCAAACTTAGAAGCGCACGTAAAAACAAAGCATCTCAAAGAAAATGACTATAAATGTGCAGAGTGTGAATACCAGACAAACAACAAGTCACATTTACAAGAACACATAAAATCAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCAGACAAACTTCAAGTCAAACTTAGAAGCGCACGTAAAAACTAAACATCTGAAACAAAAATATTTGAAATGCGCAGAGTGCGAATATCGGACAAACTACAAGTCATCTTTAAAAGGACACGTCAAAGCAAAACATCTGAAAGAAAATGATTATGAATGCGCAGGGTGTGACTTTAAGACAAGCAATAAGTCATATTTGCAAGTACACATAAAAGCAAAACATCTGTAA
Protein Sequence: MYKCGICRRGHKTRESLKMHMEKIHPGNESRDVGKHYIKANVKNLKEGSPHFHDCEEQCRCLKCKFRTRDKCHLTSLKIKHLKQKNYKCANCEYKANNKSVLEKHIKTKHLKQKNLKCAECEYQTNYKSLLQIHIKTKHMKQKDYKCAVCEYKASRKSNLHVHIKTKHLKQTDFKCAECQYQTNHKQNFKIHVKTKHLKQKDFKCAECEFKTSYKSGLEKHIKTKHLKQKDLNCAECEYRTNRKSHLQLHIKSKHLKQNDFKCSKCEYQTNYKSYLKTHIKSRHLKENDYKCGECDYKTAWKSNFQLHIKTKHLKQKDLKCAECEYQTNYKSSLEAHVKTKHLKENDYKCAECEYQTNFKSNLEAHVKTKHLKENDYKCAECEYQTNNKSHLQEHIKSKHLKQKDLKCAECEYQTNFKSNLEAHVKTKHLKQKYLKCAECEYRTNYKSSLKGHVKAKHLKENDYECAGCDFKTSNKSYLQVHIKAKHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -