Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010001382.1:268225-271032[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 2.9 3.4e+02 5.5 3.3 1 23 67 89 67 89 0.98

2 26 0.00022 0.026 18.4 3.9 1 23 95 118 95 118 0.97

3 26 0.0038 0.44 14.5 3.4 1 23 242 265 242 265 0.98

4 26 0.012 1.4 13.0 1.3 1 23 272 295 272 295 0.96

5 26 0.62 73 7.6 3.4 1 23 301 324 301 324 0.98

6 26 0.059 6.9 10.8 0.9 1 23 330 353 330 353 0.98

7 26 0.015 1.7 12.7 1.1 1 23 359 382 359 382 0.98

8 26 0.43 50 8.1 2.8 1 23 388 411 388 411 0.98

9 26 0.033 3.8 11.6 0.6 1 23 417 440 417 440 0.98

10 26 0.011 1.3 13.1 1.4 1 23 446 469 446 469 0.97

11 26 0.046 5.3 11.1 4.5 1 23 475 498 475 498 0.96

12 26 0.00084 0.097 16.6 1.5 1 23 504 527 504 527 0.98

13 26 0.13 15 9.7 1.6 1 23 533 555 533 555 0.97

14 26 7.1 8.2e+02 4.2 2.7 1 23 560 583 560 583 0.96

15 26 0.025 2.9 12.0 2.8 1 23 589 612 589 612 0.98

16 26 0.0065 0.76 13.8 3.1 1 23 617 640 617 640 0.98

17 26 0.0012 0.14 16.1 2.1 1 23 646 669 646 669 0.98

18 26 0.0012 0.14 16.1 1.4 1 23 675 698 675 698 0.97

19 26 0.019 2.2 12.3 1.7 1 23 704 727 704 727 0.96

20 26 0.015 1.7 12.7 2.8 1 23 733 756 733 756 0.97

21 26 0.027 3.2 11.8 1.7 1 23 762 785 762 785 0.96

22 26 0.029 3.3 11.8 1.3 1 23 791 814 791 814 0.97

23 26 2.5 2.9e+02 5.7 4.7 1 23 820 843 820 843 0.98

24 26 0.022 2.5 12.2 1.7 1 23 849 872 849 872 0.98

25 26 0.0042 0.49 14.4 2.0 1 23 878 901 878 901 0.96

26 26 0.047 5.5 11.1 1.8 1 23 907 930 907 930 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	2.9	3.4e+02	5.5	3.3	1	23	67	89	67	89	0.98
2	26	0.00022	0.026	18.4	3.9	1	23	95	118	95	118	0.97
3	26	0.0038	0.44	14.5	3.4	1	23	242	265	242	265	0.98
4	26	0.012	1.4	13.0	1.3	1	23	272	295	272	295	0.96
5	26	0.62	73	7.6	3.4	1	23	301	324	301	324	0.98
6	26	0.059	6.9	10.8	0.9	1	23	330	353	330	353	0.98
7	26	0.015	1.7	12.7	1.1	1	23	359	382	359	382	0.98
8	26	0.43	50	8.1	2.8	1	23	388	411	388	411	0.98
9	26	0.033	3.8	11.6	0.6	1	23	417	440	417	440	0.98
10	26	0.011	1.3	13.1	1.4	1	23	446	469	446	469	0.97
11	26	0.046	5.3	11.1	4.5	1	23	475	498	475	498	0.96
12	26	0.00084	0.097	16.6	1.5	1	23	504	527	504	527	0.98
13	26	0.13	15	9.7	1.6	1	23	533	555	533	555	0.97
14	26	7.1	8.2e+02	4.2	2.7	1	23	560	583	560	583	0.96
15	26	0.025	2.9	12.0	2.8	1	23	589	612	589	612	0.98
16	26	0.0065	0.76	13.8	3.1	1	23	617	640	617	640	0.98
17	26	0.0012	0.14	16.1	2.1	1	23	646	669	646	669	0.98
18	26	0.0012	0.14	16.1	1.4	1	23	675	698	675	698	0.97
19	26	0.019	2.2	12.3	1.7	1	23	704	727	704	727	0.96
20	26	0.015	1.7	12.7	2.8	1	23	733	756	733	756	0.97
21	26	0.027	3.2	11.8	1.7	1	23	762	785	762	785	0.96
22	26	0.029	3.3	11.8	1.3	1	23	791	814	791	814	0.97
23	26	2.5	2.9e+02	5.7	4.7	1	23	820	843	820	843	0.98
24	26	0.022	2.5	12.2	1.7	1	23	849	872	849	872	0.98
25	26	0.0042	0.49	14.4	2.0	1	23	878	901	878	901	0.96
26	26	0.047	5.5	11.1	1.8	1	23	907	930	907	930	0.95

Sequence Information

Coding Sequence: ATGTGCCATGCACACGTGAACACCATTACGGTGCGGGACTGGAAATATTATCATCTCATTATATTTAAAAAGTCTAAATTTTATTCGGATTCATTTGTTTTCAGATACTGGGTACTTCGCAAACCGGAGGTTCACGGGTTAGGACTAGAATGGTGTTCGCCTGGAAGACGCAAGGCCAGAATATGGAAACGTAGAATATTCAAATGTACGCAATGCAAGTTTAGGGCAAAATACGGCGCCGACTTCAGGCACCACATTAACGAGCATTGCGAGGTGAAAATGTACAAATGTGGAATTTGTCACAGGAGATACAAGACGAAGGATTCGCTCAAGACCCACGTGTTAAAAAATCATGCTGATAATGCAGGAAGGGGTATCCAAAAATACACTACGCGTGACTATTTCAAAGCAAATATTAGAAATATCAAAGGGAGATCTCCACGCTCACATGGTGAAAAACAATGTCAATGCACGAAGTGCAAATTTCAAACAAGGAACAAACCTTACCTAAAATCACTTGTCAGAATAAAACATATCAACAAAAAGAAATATAAGTGCTTAAATTGCGAATTTAAGACACATTGCAGGAGTTATTTAGAAAAGCACATCAAAATAAAGCATCTCTTGGAAACTAATTATAAATTCACCGAGGGTGAATTCAGCACGAACAAAAAATCATATATAAAGAAACACATGAAAGCAAAACAACTTGAAGCAAATCCTTATAAATGCATGGAATGTGAATTCAAAACATCCTACAAGTCTAACTTGGAAAGACACAAAAAAATGAAACATCTTAAAGAAAAAAAATTTTATAAATGCGTTGAGTGTGAATTCAGGACAAATTACAAGTCATATTTACAAGTGCATATAAAAGCAAAACATTGTGATGAAAATGAGTATAAGTGCATGGAATGTGAATTCAAGACAAACATCAAGTCATTTCTAAAAAAACACGTGAAAAGAAAACATCTTAAAGAAATGGCTTATAAATGCGTGGAGTGTGAATTCAAGACAAACTACAAGTCAGTTTTAGAAGTGCATATAAAATCAAAACATCTTAAGGGGAATGAATATAAATGCATGGAGTGTGAATTCAAGACAAACTACAAGTCAGGTTTAGAAGTGCATATAAAATCAAAGCATCTTAAAGGAAATGATTATAAATGCATGGAGTGCGAATTCAAGACAAACATCAAGTCATTTTTAAACAGACACGTGAAAAGAAAACATCTGAAACAAGAGGATTATAGATGCGCAGAATGTGAATTCAAGGCAAACTACAAGTCAGATTTAGAAATGCATATAAAATCGAAACATGTTAAAGGAAATTATTATAAATGCATGGAGTGTGAATTCCAGACAAGCGACAAGGCATATTTAAAGAAACACGTGAAAATAAAACATCTTAATGAAAATGCTTATAAATGCATGGAATGTGAATTCAAAACATACTACAAGTCACACTTAATGAAACACATAAAAGGAAAACATCTAACACAAAATGATTATAAATGCATGGAGTGTGAATACAAGACAAACTACAAGTCAAGTTTAGAAGCGCACATTAAAACGAAACATCTTAATGAAAAGGAGTATAATTGCATGGAGTGTGAGTTCAAGACAAACTACAAGTCATATTTCCAAGTGCATATAAAAGCACATGAAGGAAATGAGTATAAATGCATTGAGTGTGAATTCAAGACAAATATCAAGTCATTTTTAAAAAGACACGTGAAAAGAAAACATCTTAAAGAAATAGATTATAAATGCATGGAGTGTAAATTCAAGACAAACTACAAGCCATATTTACAAAGACATATAAAAATCAAACATCTTAAAGAGAATTATAAATGCACGGAGTGTAAATTCAAGACAAACTACAAGCCATATTTACAAAGACATATAAAAATAAAACATCTTAAAGAAATGGATTATAAATGCATGGAGTGTGAATTCAAGACAAACGACAAGTCATATTTACAAAGACATATAAAAATCAAACATCTCAAAGGAAATGCGTATAAATGCATGGAGTGTGAATTCAAGACAACGAACAAGTCATATTTACAAGTGCATATAAGAGCAAAACATCGTAATGAAAATGAGTATAAATGCATGGAGTGCGAATTCAAGACAAACTACAAGTCATATTTACAAGTGCATATAAAAGCAAAACATCTTAAAGGAAATGATTATAAATGCATGGAGTGTGAATTCAAGACAAGCTACAGGTCATATTTAACAAAACACGTGAAAGTAAAACATCTTAAAGAAAATGAGTATAAATGCATGGAGTGTGAATTCAAGACAAACGACAAGTCATATTTCCAAGTGCATATAAAAGCAAAACATCTTAAAGGAAATGATTATAAATGCATGGAGTGTGAATTCAAGACATACTACAAGTCGGGTTTAGAAGTGCATATAAAATCGAAACATCTTAAAGGAAATGATTATAAATGCATGGAGTGTGAGTTCAAGACAAACATCAAGTCATGTTTAAGTAGACACGTGAAAAGAAAACATCTTAAAGGAAGTGATTATAAATGCATGGAGTGTGAATTCAAGACAAACGAGAAGTCATATTTACAAAGCCATATAAAAATTAAACATCTTAAAGGAGATGAGTATAAATGCATGGAGTGTGAATTCAAGACAAAGAACAAGTCATATTTACGAGTGCATATAAAAGCAAAACATCTTAAAGGCCTTGATTATAAATGTATAGAGTGTGACTACAAGACAAACTACAAGTCAAACTTAGAAAGTCATAGAAAAGCAAAACATTTTTCCGCAAATCGTTAG
Protein Sequence: MCHAHVNTITVRDWKYYHLIIFKKSKFYSDSFVFRYWVLRKPEVHGLGLEWCSPGRRKARIWKRRIFKCTQCKFRAKYGADFRHHINEHCEVKMYKCGICHRRYKTKDSLKTHVLKNHADNAGRGIQKYTTRDYFKANIRNIKGRSPRSHGEKQCQCTKCKFQTRNKPYLKSLVRIKHINKKKYKCLNCEFKTHCRSYLEKHIKIKHLLETNYKFTEGEFSTNKKSYIKKHMKAKQLEANPYKCMECEFKTSYKSNLERHKKMKHLKEKKFYKCVECEFRTNYKSYLQVHIKAKHCDENEYKCMECEFKTNIKSFLKKHVKRKHLKEMAYKCVECEFKTNYKSVLEVHIKSKHLKGNEYKCMECEFKTNYKSGLEVHIKSKHLKGNDYKCMECEFKTNIKSFLNRHVKRKHLKQEDYRCAECEFKANYKSDLEMHIKSKHVKGNYYKCMECEFQTSDKAYLKKHVKIKHLNENAYKCMECEFKTYYKSHLMKHIKGKHLTQNDYKCMECEYKTNYKSSLEAHIKTKHLNEKEYNCMECEFKTNYKSYFQVHIKAHEGNEYKCIECEFKTNIKSFLKRHVKRKHLKEIDYKCMECKFKTNYKPYLQRHIKIKHLKENYKCTECKFKTNYKPYLQRHIKIKHLKEMDYKCMECEFKTNDKSYLQRHIKIKHLKGNAYKCMECEFKTTNKSYLQVHIRAKHRNENEYKCMECEFKTNYKSYLQVHIKAKHLKGNDYKCMECEFKTSYRSYLTKHVKVKHLKENEYKCMECEFKTNDKSYFQVHIKAKHLKGNDYKCMECEFKTYYKSGLEVHIKSKHLKGNDYKCMECEFKTNIKSCLSRHVKRKHLKGSDYKCMECEFKTNEKSYLQSHIKIKHLKGDEYKCMECEFKTKNKSYLRVHIKAKHLKGLDYKCIECDYKTNYKSNLESHRKAKHFSANR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -