Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010001720.1:216219-217826[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.9 2.2e+02 6.0 4.5 1 23 13 35 13 35 0.97

2 16 0.00033 0.038 17.9 3.5 1 23 41 64 41 64 0.96

3 16 0.0042 0.48 14.4 1.7 1 23 127 150 127 150 0.96

4 16 0.00037 0.043 17.7 0.9 1 23 156 179 156 179 0.98

5 16 0.016 1.8 12.6 2.6 1 23 185 208 185 208 0.98

6 16 0.54 63 7.8 3.1 1 23 214 237 214 237 0.98

7 16 0.52 60 7.8 3.0 1 23 243 266 243 266 0.98

8 16 0.037 4.3 11.4 2.7 1 23 272 295 272 295 0.97

9 16 0.00071 0.083 16.8 1.7 1 23 301 324 301 324 0.96

10 16 5.9e-05 0.0068 20.2 2.2 1 23 330 353 330 353 0.98

11 16 0.12 14 9.8 2.6 1 23 359 382 359 382 0.97

12 16 0.00015 0.018 18.9 4.9 1 23 388 411 388 411 0.98

13 16 0.00072 0.083 16.8 0.2 1 23 417 440 417 440 0.96

14 16 0.00021 0.025 18.5 0.6 1 23 446 469 446 469 0.98

15 16 0.0033 0.38 14.7 1.9 1 23 475 498 475 498 0.98

16 16 0.00023 0.027 18.3 0.6 1 23 504 527 504 527 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.9	2.2e+02	6.0	4.5	1	23	13	35	13	35	0.97
2	16	0.00033	0.038	17.9	3.5	1	23	41	64	41	64	0.96
3	16	0.0042	0.48	14.4	1.7	1	23	127	150	127	150	0.96
4	16	0.00037	0.043	17.7	0.9	1	23	156	179	156	179	0.98
5	16	0.016	1.8	12.6	2.6	1	23	185	208	185	208	0.98
6	16	0.54	63	7.8	3.1	1	23	214	237	214	237	0.98
7	16	0.52	60	7.8	3.0	1	23	243	266	243	266	0.98
8	16	0.037	4.3	11.4	2.7	1	23	272	295	272	295	0.97
9	16	0.00071	0.083	16.8	1.7	1	23	301	324	301	324	0.96
10	16	5.9e-05	0.0068	20.2	2.2	1	23	330	353	330	353	0.98
11	16	0.12	14	9.8	2.6	1	23	359	382	359	382	0.97
12	16	0.00015	0.018	18.9	4.9	1	23	388	411	388	411	0.98
13	16	0.00072	0.083	16.8	0.2	1	23	417	440	417	440	0.96
14	16	0.00021	0.025	18.5	0.6	1	23	446	469	446	469	0.98
15	16	0.0033	0.38	14.7	1.9	1	23	475	498	475	498	0.98
16	16	0.00023	0.027	18.3	0.6	1	23	504	527	504	527	0.97

Sequence Information

Coding Sequence: ATGAGACGCAAGGTCAAGAGATGGAAGCGTGGAATGTACAATTGTACCCAATGCAAGTTCACAACAATGTACAACGCCGACTTCAGGCACCACACTAACGAGCATTACGCAGTGAAAAATTTCAAATGTGGAATTTGTCACAGAAGATACAAGACGAAAAAATCTCTCAAGTCGCATGTTGCAAAAATACATATTGACAATGAAGGAAGAGATGTCCAAAAATATCGTGCGTGTGATTATTCCAAAGGTAATATTAAAAATATAAAAGCGAGATCTGCATATTCACATGATGGTACAAAACGAGTTTCAAAGTTTCAAATAAGGGAAAAATATCGCCTAAAATCTGTTACTAAAACAAAACGTTTGATGACAGGCAAATATAAGTGCGAAAATTGCGAGTTTAAGACAAACTACAAGTCAAATTTAGGAAGACACATAAAGGCAAAACATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAAGGCAACTCAAAAGGCATATTTAGAAAATCACATGAAAGTCAAACATCTCAAATTATGGGATTATAAGTGCATGGTGTGTGAATACCAGACGAACTTCAAGTCAAAGTTGCAAATGCACATAAAGACAAAACATCTCAAATTATGGGATTATAAATGCATGGAGTGTGAATACCAGACAAATTTCAAGGTGTGTTTGGAACTACACATAAAGTCAAAACATCTCAAGTTACGCGATTATAAATGCACGGAGTGTGAATACCAGACGCATCTCACGCGAAATTTGGAACTCCACATAAAGTCAAAACATCTTAAGTTATATGATTATAAGTGCATGGAGTGTGAATACCAGACGAACATCAAGTCACATTTGAAACAGCACATAGAATCAAAGCATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAAGGCAACTCAAAAATCACATTTAGAAGATCACATCAAAGCGAAACATCTTAAATTATGGGATTATAAATGCATGGAATGTGACTACAAGGCAGTTCGCAAGTCACATTTAGAAGCGCACATGAAAACAAAACATCTTAAATTATATGATTATAAGTGCATGAATTGTGAATACCAGACGAACATCAAGTCACATTTGAAAGAGCACATAGAATCAAAGCATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAAGGCAACTAAAAAATCACATTTAAACAGACACATGAAAACGAAACATATCAAATTAAGGGATTATACGTGCATGGAATGTGACTACAAGACAGCTTCTAAGTCAAATTTAGTAGGACATATGAAAGCGGTACATCTTAAATTAAGGGATTATAAATGCATGGAATGTGACTACAAGGCAGCTTCTAAGTCAAATTTAGAAGGACACATGAAAACGAAACATCTTAAATTAAGGGATTATAAGTGCGTGGAGTGTGAATACCAGACGAGTTTCAAGTCAAGTTTGAAATTACACATAAAGTCAAAGCATCTTAAATTACGCGATTATATATGCATGGAATGTGACTACAAGGCAACTCAAAAGTCAAATTTAGTAACACACATGAAAGTGAAACATCTTAAAACGGTTGTCTCACATACGTGA
Protein Sequence: MRRKVKRWKRGMYNCTQCKFTTMYNADFRHHTNEHYAVKNFKCGICHRRYKTKKSLKSHVAKIHIDNEGRDVQKYRACDYSKGNIKNIKARSAYSHDGTKRVSKFQIREKYRLKSVTKTKRLMTGKYKCENCEFKTNYKSNLGRHIKAKHLKLRDYKCMECDYKATQKAYLENHMKVKHLKLWDYKCMVCEYQTNFKSKLQMHIKTKHLKLWDYKCMECEYQTNFKVCLELHIKSKHLKLRDYKCTECEYQTHLTRNLELHIKSKHLKLYDYKCMECEYQTNIKSHLKQHIESKHLKLRDYKCMECDYKATQKSHLEDHIKAKHLKLWDYKCMECDYKAVRKSHLEAHMKTKHLKLYDYKCMNCEYQTNIKSHLKEHIESKHLKLRDYKCMECDYKATKKSHLNRHMKTKHIKLRDYTCMECDYKTASKSNLVGHMKAVHLKLRDYKCMECDYKAASKSNLEGHMKTKHLKLRDYKCVECEYQTSFKSSLKLHIKSKHLKLRDYICMECDYKATQKSNLVTHMKVKHLKTVVSHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -