Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000622.1:115356-117020[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7.8e-05 0.0091 19.8 0.9 1 23 2 25 2 25 0.97

2 16 0.00028 0.033 18.1 2.3 1 23 116 139 116 139 0.98

3 16 0.0025 0.29 15.1 0.5 2 23 146 168 145 168 0.96

4 16 0.003 0.35 14.8 1.4 1 23 174 197 174 197 0.96

5 16 0.39 45 8.2 0.4 1 23 203 226 203 226 0.98

6 16 0.00072 0.084 16.8 0.6 1 23 232 255 232 255 0.96

7 16 0.0088 1 13.4 0.6 1 23 261 284 261 284 0.98

8 16 0.0013 0.15 16.0 3.2 1 23 290 313 290 313 0.98

9 16 0.0012 0.14 16.1 2.2 2 23 320 342 319 342 0.97

10 16 0.0001 0.012 19.5 2.3 1 23 348 371 348 371 0.98

11 16 0.0029 0.33 14.9 2.1 1 23 377 400 377 400 0.98

12 16 0.024 2.7 12.0 4.7 1 23 406 429 406 429 0.98

13 16 0.0059 0.69 13.9 2.0 1 23 435 458 435 458 0.98

14 16 0.00099 0.12 16.4 2.2 2 23 465 487 464 487 0.96

15 16 0.00036 0.041 17.8 2.2 2 23 494 516 493 516 0.97

16 16 0.48 56 7.9 7.3 1 23 522 545 522 545 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7.8e-05	0.0091	19.8	0.9	1	23	2	25	2	25	0.97
2	16	0.00028	0.033	18.1	2.3	1	23	116	139	116	139	0.98
3	16	0.0025	0.29	15.1	0.5	2	23	146	168	145	168	0.96
4	16	0.003	0.35	14.8	1.4	1	23	174	197	174	197	0.96
5	16	0.39	45	8.2	0.4	1	23	203	226	203	226	0.98
6	16	0.00072	0.084	16.8	0.6	1	23	232	255	232	255	0.96
7	16	0.0088	1	13.4	0.6	1	23	261	284	261	284	0.98
8	16	0.0013	0.15	16.0	3.2	1	23	290	313	290	313	0.98
9	16	0.0012	0.14	16.1	2.2	2	23	320	342	319	342	0.97
10	16	0.0001	0.012	19.5	2.3	1	23	348	371	348	371	0.98
11	16	0.0029	0.33	14.9	2.1	1	23	377	400	377	400	0.98
12	16	0.024	2.7	12.0	4.7	1	23	406	429	406	429	0.98
13	16	0.0059	0.69	13.9	2.0	1	23	435	458	435	458	0.98
14	16	0.00099	0.12	16.4	2.2	2	23	465	487	464	487	0.96
15	16	0.00036	0.041	17.8	2.2	2	23	494	516	493	516	0.97
16	16	0.48	56	7.9	7.3	1	23	522	545	522	545	0.97

Sequence Information

Coding Sequence: ATGTACAAATGTGGAATTTGTCGCCGAGGGTACAAAACGAGAGACTCTCTGAAGATGCACATGGAAAAAATTCATCCCGGCAATGAATGTAGAGATGTCGGGAAGCACTATATCAAAGCTAATGTTAAAAATGTAAAAGGAAGATCTCCACATTTACACGACGGTAAAGAACAATGTAAATGCTCGAAATGCAAATTTCGAACAAGGGACAAATGTCACTTAAAATCACTAAAAATAAAACATCTGAATCGAGGCAAATATAAATGCGCAAATTGGGAGTTTAAGACACATTACGGGACTTATTTAGGAAAGCACATTAAAATGAAACTTCTGAAACAAAAGAATTATAAATGTGCAGAGTGTGAATACCAGACAAACAACAAGTCACATTTACAAGCACACATAAAATCAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAAACAAAACATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATATCAGACAAACTACAAGTCATCTTTAAAGACACACATCAAAGCAAAACATCTGAAAGAAAATGATTATAAATGTGGAGAGTGTGAATACAAGACGGCCTGGAAGTCAACTTTAGACGTGCATGTAAAAACAAAACATCGAAAACAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCAAACTTAGAAATGCACATAAAAGCAAAACATCTAAAACAAGAGGATTATAAATGCCCAGAGTGTAAATACAAGACTGCCTGGAAGTCAAATTTAGACGCACATGTAAAAACAAAACATCTAAAACAAAAGGATTACAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCACATTTACAAGAACACATAAAAACAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTAAATACCAGACAAACAACAAGTCTAACTTAAAACTGCACTTAAAAACAAAACATCTGAAACAAAAGGATTTCAAATGCTCAGAGTGTGAATACCAGACAAACAACAAGTCTAACTTAAAACTGCACATAAAAACAAGACATCTAAAACAAAAGGATTATAAATGCGCAGAGTGTGAATATAAGGCAAGCAGGAAGTTACATTTACAAGTACACATAAAAACAAAACATCTGAAACAAAAGGATTTTAAATGCGCAGAGTGTAAACACCAGACAAACTACAAGTCAAAGTTAGAACGGCACGTAAAAACAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATATAAGGCAAGCAGGAAGTTACATTTACAAGTACACATAAAATCAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCGGACTAACAACAAGTCACATTTACAAGTACACATAAAATCAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTAAATACCAGACAAACAACAAGTCTAACTTAAAACAGCACATAAAAACAAAACATCTGAAACAAAAGGATTTCAAATGCTCAGAGTGTGAATACCAGACATGCCGCAAATTTTGTTTGCAAGTACACGTAAAATCAAAACATCTGAAACAAAATTATTATAAATGCACATAA
Protein Sequence: MYKCGICRRGYKTRDSLKMHMEKIHPGNECRDVGKHYIKANVKNVKGRSPHLHDGKEQCKCSKCKFRTRDKCHLKSLKIKHLNRGKYKCANWEFKTHYGTYLGKHIKMKLLKQKNYKCAECEYQTNNKSHLQAHIKSKHLKQKDLKCAECEYQTNYKSNLEAHVKTKHLKENDYKCAECEYQTNYKSSLKTHIKAKHLKENDYKCGECEYKTAWKSTLDVHVKTKHRKQNDYKCAECEYQTNNKSNLEMHIKAKHLKQEDYKCPECKYKTAWKSNLDAHVKTKHLKQKDYKCAECEYQTNYKSHLQEHIKTKHLKQKDLKCAECKYQTNNKSNLKLHLKTKHLKQKDFKCSECEYQTNNKSNLKLHIKTRHLKQKDYKCAECEYKASRKLHLQVHIKTKHLKQKDFKCAECKHQTNYKSKLERHVKTKHLKQKDYKCAECEYKASRKLHLQVHIKSKHLKQKDLKCAECEYRTNNKSHLQVHIKSKHLKQKDLKCAECKYQTNNKSNLKQHIKTKHLKQKDFKCSECEYQTCRKFCLQVHVKSKHLKQNYYKCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -