Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000534.1:820778-822760[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4 1.6e+02 6.5 3.7 1 23 64 86 64 86 0.98

2 18 4.7e-06 0.00054 23.7 2.1 1 23 92 115 92 115 0.97

3 18 0.98 1.1e+02 6.9 3.3 1 23 174 197 174 197 0.97

4 18 0.00038 0.044 17.7 1.0 1 23 231 254 231 254 0.98

5 18 0.11 13 9.9 2.6 1 23 260 283 260 283 0.95

6 18 0.004 0.46 14.5 1.5 1 23 289 312 289 312 0.98

7 18 0.0011 0.12 16.3 1.6 1 23 318 341 318 341 0.96

8 18 0.0029 0.34 14.9 2.3 1 23 347 370 347 370 0.98

9 18 0.0094 1.1 13.3 0.7 1 23 376 399 376 399 0.97

10 18 0.046 5.4 11.1 3.1 1 23 405 428 405 428 0.98

11 18 0.00075 0.087 16.7 1.4 1 23 434 457 434 457 0.98

12 18 0.077 8.9 10.4 0.4 1 23 463 486 463 486 0.98

13 18 0.00094 0.11 16.4 1.9 1 23 492 515 492 515 0.96

14 18 0.00023 0.027 18.4 1.7 1 23 520 543 520 543 0.98

15 18 0.0019 0.23 15.4 1.1 1 23 549 572 549 572 0.98

16 18 0.00017 0.019 18.8 2.4 1 23 578 600 578 600 0.99

17 18 0.002 0.24 15.4 0.7 1 23 606 629 606 629 0.98

18 18 0.0015 0.17 15.8 2.2 1 23 635 658 635 658 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4	1.6e+02	6.5	3.7	1	23	64	86	64	86	0.98
2	18	4.7e-06	0.00054	23.7	2.1	1	23	92	115	92	115	0.97
3	18	0.98	1.1e+02	6.9	3.3	1	23	174	197	174	197	0.97
4	18	0.00038	0.044	17.7	1.0	1	23	231	254	231	254	0.98
5	18	0.11	13	9.9	2.6	1	23	260	283	260	283	0.95
6	18	0.004	0.46	14.5	1.5	1	23	289	312	289	312	0.98
7	18	0.0011	0.12	16.3	1.6	1	23	318	341	318	341	0.96
8	18	0.0029	0.34	14.9	2.3	1	23	347	370	347	370	0.98
9	18	0.0094	1.1	13.3	0.7	1	23	376	399	376	399	0.97
10	18	0.046	5.4	11.1	3.1	1	23	405	428	405	428	0.98
11	18	0.00075	0.087	16.7	1.4	1	23	434	457	434	457	0.98
12	18	0.077	8.9	10.4	0.4	1	23	463	486	463	486	0.98
13	18	0.00094	0.11	16.4	1.9	1	23	492	515	492	515	0.96
14	18	0.00023	0.027	18.4	1.7	1	23	520	543	520	543	0.98
15	18	0.0019	0.23	15.4	1.1	1	23	549	572	549	572	0.98
16	18	0.00017	0.019	18.8	2.4	1	23	578	600	578	600	0.99
17	18	0.002	0.24	15.4	0.7	1	23	606	629	606	629	0.98
18	18	0.0015	0.17	15.8	2.2	1	23	635	658	635	658	0.98

Sequence Information

Coding Sequence: ATGGGAACAGTTGTAATAAAAATACACAAAATAATACAACTAAATAACATATTATATTTGAAAGTATTTGTAATTTATTTCGGATTCGTTTTCAGATTCTGCTTACTTCCAACACCAGAGGACCATAAGCTAGAACTAAAAGGACGTTCATCTTTAAGAAGTAAGGCCAATAAATGGAAGCACGGAATATACAAGTGTGCACAATGCAACTTCAGGACAATGTACAATGCCGACTTCAGACACCACACTAACGAGCATTACGAGGTAAAAATATACAAGTGTGAAATTTGTCACAGAAGATACAAGACGAAGGATGCTCTCAAGGCACACATGGAAAAAATTCATGCTGTCAATGAAGCAAGGGATATTGAAAAATACTCTACGCGTGACTACTTCAAGGCCGGTATTAAAAATATAAAAAAGGGATCTTCACTCTCACGCGACAGTGAATTACAATCCTCTAAATGCAAGTTTCAAACTAGGGATAAATGTCACTTAAAGTCACTGAACAGAGGCAAGCATAAGTGCGCAAATTGCGAGTTTAAGACATATTACAGGCCTTATTTAGAGATGCACATGAAAATGAAACATCCCATGGCAAGTTATAAATGCAAAGAGAGTCAAGTCCAGGCTAACTTCAAGTCAAGATTGAAAGTACACATAAAGGCAAAACATATTAAAGAAAATAATTATAAATGCCCAGAGTGTGAATTCAGGACAAATTACAGGTCATATTTGCAAACACACATAAAAATAATACATCTTAAAGTAAGCGATTATAAATGTGCAGAGTGTGAATACGAGACAAATAACAAGTCACATTTAAAATTCCACATAAAAGCTAAACATCTTAAAGAATTTAATTATAAATGCGCAGAGTGTGAATTCAGGACAAACTACAAGACATATTTGCAAACACACATGAAAATAATACATCTTAAAGTAAGCGATTATAAATGTGCGGAGTGTGAATACGAGACAAATAGCAAGTCACATTTAAAAATTCACATAAAAGCAAAACATCTGAAAGAACACGAATATAAATGTGCAGAGTGTGAATTCAAAACGAGCTACAACTCAAGTTTAAAGACACATGTAAAAACGAAACATCTCAAACAAATGGATTATAAATGCGCAGAGTGTGAGTACATGACGAATTACAAACGTAATTTGATATTACACGTAAAAATCAAACATCTTAAAGAAAGCGATTATAAGTGCGTGGAATGTGAATACAAGACAAACATTAAGAGACATTTAAAAGCACACGTTAAAACGAAACATCTGAAACAAAACGATTATAAATGCACAGAGTGTGAATACATGACAAATTACGAACGGAATTTAAAAGTACACATAAACACAAAACACCTGAATCAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACGAACGTCAAGTCAATTTTAGAAAGACACGTAAAGACAATACATCTTAAAGAACAGAATTATAAATGCGCAGAGTGTGAATACAAGACAAACCATAAGTCAAATTTACAAGCACATGTGAAAGCAAAACATCTTGAACACGAATATGAATGCGCAGAGTGTGAATTCAGGACAAATGACAAGTCACATTTAAAAGCACACATAAAAACAACACATCCGAAGCAAAAGGAATATAAATGCCTAGAGTGTGAATACATGGCAAAGAAGAATTCATATTTGCAAGTACACATAAAAACAAAACATCTAAAACAGGAGGATTATAAATGCGCAGAATGTGAATACAAGACAAATCACAAGTCAAGTTTAGAAAGACACATAAAAATACATCTCAAAGAACACGATTATAAATGCGCAGAATGTGAATTTACGTCGAATAACATGACAAATTTAAGAGCACACATAAACACGAAACATCTGGAACAAAAAGATTACAAATGCACAGAGTGTGAGTACATGACAAATTACAAACGTAATTTTAAAGCACACATAGAAACGAAACATCTGAAATAA
Protein Sequence: MGTVVIKIHKIIQLNNILYLKVFVIYFGFVFRFCLLPTPEDHKLELKGRSSLRSKANKWKHGIYKCAQCNFRTMYNADFRHHTNEHYEVKIYKCEICHRRYKTKDALKAHMEKIHAVNEARDIEKYSTRDYFKAGIKNIKKGSSLSRDSELQSSKCKFQTRDKCHLKSLNRGKHKCANCEFKTYYRPYLEMHMKMKHPMASYKCKESQVQANFKSRLKVHIKAKHIKENNYKCPECEFRTNYRSYLQTHIKIIHLKVSDYKCAECEYETNNKSHLKFHIKAKHLKEFNYKCAECEFRTNYKTYLQTHMKIIHLKVSDYKCAECEYETNSKSHLKIHIKAKHLKEHEYKCAECEFKTSYNSSLKTHVKTKHLKQMDYKCAECEYMTNYKRNLILHVKIKHLKESDYKCVECEYKTNIKRHLKAHVKTKHLKQNDYKCTECEYMTNYERNLKVHINTKHLNQKDYKCAECEYKTNVKSILERHVKTIHLKEQNYKCAECEYKTNHKSNLQAHVKAKHLEHEYECAECEFRTNDKSHLKAHIKTTHPKQKEYKCLECEYMAKKNSYLQVHIKTKHLKQEDYKCAECEYKTNHKSSLERHIKIHLKEHDYKCAECEFTSNNMTNLRAHINTKHLEQKDYKCTECEYMTNYKRNFKAHIETKHLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -