Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000473.1:262396-264279[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.7e-05 0.01 19.7 1.1 1 23 19 42 19 42 0.94

2 19 0.017 2 12.5 1.5 1 23 105 128 105 128 0.96

3 19 0.035 4.1 11.5 1.1 1 23 134 157 134 157 0.96

4 19 0.0031 0.36 14.8 0.6 1 23 163 186 163 186 0.96

5 19 0.025 2.9 11.9 1.4 1 23 192 215 192 215 0.96

6 19 0.0063 0.74 13.8 3.6 1 23 221 244 221 244 0.96

7 19 0.047 5.5 11.1 0.5 1 23 250 273 250 273 0.96

8 19 0.0046 0.54 14.3 1.0 1 23 279 302 279 302 0.96

9 19 0.0064 0.74 13.8 0.4 1 23 308 331 308 331 0.96

10 19 0.0022 0.26 15.3 0.7 1 23 337 360 337 360 0.96

11 19 0.0028 0.33 14.9 0.3 1 23 366 389 366 389 0.96

12 19 0.0063 0.73 13.8 0.4 1 23 395 418 395 418 0.96

13 19 0.0006 0.07 17.1 1.0 1 23 424 447 424 447 0.96

14 19 6.3 7.3e+02 4.4 1.0 1 23 453 476 453 476 0.92

15 19 0.026 3 11.9 0.9 1 23 482 505 482 505 0.96

16 19 0.002 0.23 15.4 0.7 1 23 511 534 511 534 0.96

17 19 0.018 2.1 12.4 3.5 1 23 540 563 540 563 0.96

18 19 0.00018 0.021 18.7 1.1 1 23 569 592 569 592 0.98

19 19 0.0052 0.6 14.1 0.6 1 23 598 621 598 621 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.7e-05	0.01	19.7	1.1	1	23	19	42	19	42	0.94
2	19	0.017	2	12.5	1.5	1	23	105	128	105	128	0.96
3	19	0.035	4.1	11.5	1.1	1	23	134	157	134	157	0.96
4	19	0.0031	0.36	14.8	0.6	1	23	163	186	163	186	0.96
5	19	0.025	2.9	11.9	1.4	1	23	192	215	192	215	0.96
6	19	0.0063	0.74	13.8	3.6	1	23	221	244	221	244	0.96
7	19	0.047	5.5	11.1	0.5	1	23	250	273	250	273	0.96
8	19	0.0046	0.54	14.3	1.0	1	23	279	302	279	302	0.96
9	19	0.0064	0.74	13.8	0.4	1	23	308	331	308	331	0.96
10	19	0.0022	0.26	15.3	0.7	1	23	337	360	337	360	0.96
11	19	0.0028	0.33	14.9	0.3	1	23	366	389	366	389	0.96
12	19	0.0063	0.73	13.8	0.4	1	23	395	418	395	418	0.96
13	19	0.0006	0.07	17.1	1.0	1	23	424	447	424	447	0.96
14	19	6.3	7.3e+02	4.4	1.0	1	23	453	476	453	476	0.92
15	19	0.026	3	11.9	0.9	1	23	482	505	482	505	0.96
16	19	0.002	0.23	15.4	0.7	1	23	511	534	511	534	0.96
17	19	0.018	2.1	12.4	3.5	1	23	540	563	540	563	0.96
18	19	0.00018	0.021	18.7	1.1	1	23	569	592	569	592	0.98
19	19	0.0052	0.6	14.1	0.6	1	23	598	621	598	621	0.96

Sequence Information

Coding Sequence: ATGTACAACGCCGACTTGAGGCACCATACTAACGAACATTTCAAGGTGAAAATGTACAAATGTGGAATTTGTCACAGAAGATACAAAACTAAGGCATCTCTCAAGGCGCACGTGGCAAATATTCACGTCGGCAATGAAGGAAGAGATGTCAAAAAATATTCTTCATGTGACTATTTCAAAGTTGATGTTAAAAATATAAAAGTGAGATCTCCGTACCCACAAGATGATAAAAACCATTGTCAAGGTACGAAATGCAAATTTCAAACAAGGAACAAATGTATATCACAAATAAAACATCTGAACAGAGGCAAATATAAGTGCACAAATTGCGAGTTTAAGACTAGCATCAAGTCATATTTACAAGTACACATAAAAGCAAAACATCTGAATCAAAAAGATTATAAATGCATTCAGTGTGAATTCAAGACAAACTACAAGTCAAATTTGGAAGCTCACATAAAAGTAAAACATCTGAAACGAAAGGATTATAAATGCATGGGGTGTGACTACAAAACAAGCATCAAGTCATCTTTACAAATACACATAAAAGCAAAGCATCTAAAACAAAAGGATTATAAATGCATGGAGTGTGAATACAAGACATACAAAAAGGCAAACTTAGAAATTCACAGAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATACAAGACAAACAATAAGTCATGTTTACAAATACACATGAAAGCAAAACATCTGAAACAAGAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAACATCAAGTCATATTTACTAGTACACATAAAAGCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACAAGACAAAATATAAGACAGCTTTAAAAGTACACATAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAACATCAAGTCAAATTTAGAAATTCACATAAAAGGAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATTCAAGACAAACTACAAGTCAAATTTAGAAATTCACATAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAGCATCAAGTCAAATTTAGAAATTCACATCAAAGCAAAGCATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACGAACATCAAGTCAAATTTAGAAATTCACATAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGTAAGGGGTGTGACTACAAAACAAGCATCAAGTCATCTTTACAAATACACATAAAAGCAAAGCATCTAAAACAAAAGGATTATAAATGCATGGAGTGTGAATACAAGACATACAAAAAGGCAATCTTAGAAATTCACAGAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATACAAGACAAACATCAAGTCGTATTTACAAGTACACATAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAACTATAAGTCAGCTTTAAAAGTACACATCAAAGCAAAACATCTGAAACAAGAGGACTATAAATGCATGGAGTGTGAATACAAGACAAACAATAAGTCAAAATTATGTATTCACATAAAAGCAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAGCTACAAGTCAAATTTAGAAATTCACATAAAATCAAAACATCTGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATACAAGACAAACATCAAGTCAAATTTAGAAACACACATAAAAGCAAAACATCTTAAAGAAAAAAATTTATAA
Protein Sequence: MYNADLRHHTNEHFKVKMYKCGICHRRYKTKASLKAHVANIHVGNEGRDVKKYSSCDYFKVDVKNIKVRSPYPQDDKNHCQGTKCKFQTRNKCISQIKHLNRGKYKCTNCEFKTSIKSYLQVHIKAKHLNQKDYKCIQCEFKTNYKSNLEAHIKVKHLKRKDYKCMGCDYKTSIKSSLQIHIKAKHLKQKDYKCMECEYKTYKKANLEIHRKAKHLKQKDYKCMECEYKTNNKSCLQIHMKAKHLKQEDYKCAECEYKTNIKSYLLVHIKAKHLKQNDYKCAECEYKTKYKTALKVHIKAKHLKQKDYKCAECEYKTNIKSNLEIHIKGKHLKQKDYKCAECEFKTNYKSNLEIHIKAKHLKQKDYKCAECEYKTSIKSNLEIHIKAKHLKQKDYKCAECEYKTNIKSNLEIHIKAKHLKQKDYKCKGCDYKTSIKSSLQIHIKAKHLKQKDYKCMECEYKTYKKAILEIHRKAKHLKQKDYKCMECEYKTNIKSYLQVHIKAKHLKQKDYKCAECEYKTNYKSALKVHIKAKHLKQEDYKCMECEYKTNNKSKLCIHIKAKHLKQKDYKCAECEYKTSYKSNLEIHIKSKHLKQKDYKCAECEYKTNIKSNLETHIKAKHLKEKNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989956;
90% Identity: -
80% Identity: -