Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000534.1:2369125-2370645[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0088 1 13.4 1.4 1 23 2 25 2 25 0.96

2 16 0.73 84 7.3 7.3 2 23 64 86 63 86 0.95

3 16 1.3 1.5e+02 6.5 8.0 1 23 92 115 92 115 0.98

4 16 0.0025 0.29 15.1 3.3 1 23 119 142 119 142 0.98

5 16 0.004 0.47 14.5 1.5 1 23 148 171 148 171 0.98

6 16 0.00042 0.049 17.5 2.8 1 23 177 200 177 200 0.98

7 16 0.00025 0.029 18.2 1.2 1 23 206 229 206 229 0.98

8 16 4.5e-05 0.0052 20.6 1.2 1 23 235 258 235 258 0.98

9 16 2.6e-05 0.003 21.4 0.5 1 23 264 287 264 287 0.98

10 16 5.8e-05 0.0068 20.2 1.4 1 23 293 316 293 316 0.98

11 16 0.00049 0.057 17.3 5.2 1 23 322 345 322 345 0.98

12 16 0.0021 0.24 15.3 2.5 1 23 351 374 351 374 0.97

13 16 1.3 1.5e+02 6.6 0.3 1 17 380 396 380 397 0.91

14 16 0.00067 0.078 16.9 1.6 1 23 409 432 409 432 0.98

15 16 1.1e-05 0.0013 22.5 0.4 1 23 438 461 438 461 0.98

16 16 0.0024 0.28 15.1 5.7 1 23 467 490 467 490 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0088	1	13.4	1.4	1	23	2	25	2	25	0.96
2	16	0.73	84	7.3	7.3	2	23	64	86	63	86	0.95
3	16	1.3	1.5e+02	6.5	8.0	1	23	92	115	92	115	0.98
4	16	0.0025	0.29	15.1	3.3	1	23	119	142	119	142	0.98
5	16	0.004	0.47	14.5	1.5	1	23	148	171	148	171	0.98
6	16	0.00042	0.049	17.5	2.8	1	23	177	200	177	200	0.98
7	16	0.00025	0.029	18.2	1.2	1	23	206	229	206	229	0.98
8	16	4.5e-05	0.0052	20.6	1.2	1	23	235	258	235	258	0.98
9	16	2.6e-05	0.003	21.4	0.5	1	23	264	287	264	287	0.98
10	16	5.8e-05	0.0068	20.2	1.4	1	23	293	316	293	316	0.98
11	16	0.00049	0.057	17.3	5.2	1	23	322	345	322	345	0.98
12	16	0.0021	0.24	15.3	2.5	1	23	351	374	351	374	0.97
13	16	1.3	1.5e+02	6.6	0.3	1	17	380	396	380	397	0.91
14	16	0.00067	0.078	16.9	1.6	1	23	409	432	409	432	0.98
15	16	1.1e-05	0.0013	22.5	0.4	1	23	438	461	438	461	0.98
16	16	0.0024	0.28	15.1	5.7	1	23	467	490	467	490	0.97

Sequence Information

Coding Sequence: ATGTACAAGTGTAGAATTTGTCGCAGAAGATACAAGGCTAGGGAATCCCTCAAGGTGCACGTGGAGAAAAATCATGTCGACAATGAAGGAGAAGATGTCCAAAACTACTCTACGTATGACTATTTCAAAGGTAATATTGAAACTATGAAAGAGAAATCTACACACTCACATGATGGCGAGAGGCAATGTCCATGCCCGAAATGCGAACTTCAAACAAAGAACCAATGTCACTTCAAATCACATATAAAAATAAAACATCCGTATAGAGTCAAATATAAGTGCACACATTGCGAGTTTAAGACACATTACAGGTCTTATTTAGAAATGCACACGAAAATGAAACATCAAAGTTATTATAAATGCAGGAAATGTGAATACAGGACAAATTATAAGTCAAAATTAGAAGTACACATAAAAACAAAACATTTTCAAGAAAATAATTATAAATGCGTAGAGTGTGAATTCAAGGCAAGCTACAAGTCGGGTTTAAAAAGACACGTTAAAACAAAACATCTTAAAGAATACGATTATAAATGCGCAGAGTGTGAATACGAGACAAATAATCGGTCACACTTAGAAAGACACCTAAAGAGAAGACATCTTAAAATATACGACCATAAATGCGCAGAATGTGAATACAAGACAAATGATAAGTCAGAGTTAGCAAAACACATAAAGACAATACATCTTAAAGTAAGCGATTATAAATGCGCAGAATGTGAATACAAAACAAACAGGAAGTCAAATTTAGATAGACACATTAAGACAATACATCTTAAAGTAAGCGATTATAAATGCGCAGAGTGTGAATACGAAACAAACAGGAAGTCAGATTTAGAAAGACACATAAAGACAATACATCTTAAACTAAGCGATTATAAATGCGCAGAATGTGAATACAAAACAAACAGGAAGTCATACTTAGAAAGCCACATGAAGACAATACATCTTAAAGAGCACGATTATAAATGCACAGAGTGTGAATACAAAACAAACAATAAGTCACATTTACAAAGCCACCTAAAGAGAAGACATCTTAAGATGTGCCATCATAAATGCGTAGATTGTGAATATAAGACAAATAGAATGTCAAATTTACAAGCACACGTGAAAACGAAACATTTTAAAGAAGTCGATTATAAATGCCCAGAGTGTGAACACAAGACACATACGGAGTCACTTTTAAAAGCATACATAAAGACCAAACATCTTAACATAAGCTATTATAAATGCGCAGCATGTGAATACAAAACAAATAGGAACTCGCATTTAGAAATCCACATGAAAACAATACATCTTAAAGTAAGCGATTACAAATGCGCAGAGTGTGAATACGAAACAAACAGGAAGTCAGATTTAGAAAGACACATAAGGACAATACATCTTAAAATAAGCGATCATAAATGCGCAGAATGTGAATACAAAACAAACAATAAGTCACATTTAGAAAGACATCTAAAGAGAAGACATCTTAAAATATTTGATCATAAATGCACAGAGTCTGAATTCAATACATCTTAG
Protein Sequence: MYKCRICRRRYKARESLKVHVEKNHVDNEGEDVQNYSTYDYFKGNIETMKEKSTHSHDGERQCPCPKCELQTKNQCHFKSHIKIKHPYRVKYKCTHCEFKTHYRSYLEMHTKMKHQSYYKCRKCEYRTNYKSKLEVHIKTKHFQENNYKCVECEFKASYKSGLKRHVKTKHLKEYDYKCAECEYETNNRSHLERHLKRRHLKIYDHKCAECEYKTNDKSELAKHIKTIHLKVSDYKCAECEYKTNRKSNLDRHIKTIHLKVSDYKCAECEYETNRKSDLERHIKTIHLKLSDYKCAECEYKTNRKSYLESHMKTIHLKEHDYKCTECEYKTNNKSHLQSHLKRRHLKMCHHKCVDCEYKTNRMSNLQAHVKTKHFKEVDYKCPECEHKTHTESLLKAYIKTKHLNISYYKCAACEYKTNRNSHLEIHMKTIHLKVSDYKCAECEYETNRKSDLERHIRTIHLKISDHKCAECEYKTNNKSHLERHLKRRHLKIFDHKCTESEFNTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00990208;
90% Identity: iTF_00990208;
80% Identity: iTF_00990208;