Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000542.1:170225-171964[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00023 0.027 18.3 0.7 1 23 19 42 19 42 0.97

2 17 0.24 28 8.8 5.8 1 23 109 132 109 132 0.97

3 17 0.00073 0.085 16.8 2.1 1 23 138 161 138 161 0.96

4 17 0.011 1.3 13.1 1.3 1 23 167 190 167 190 0.98

5 17 0.0022 0.26 15.3 1.1 1 23 196 219 196 219 0.98

6 17 0.00052 0.06 17.2 1.8 1 23 225 248 225 248 0.98

7 17 0.0009 0.11 16.5 1.2 1 23 254 277 254 277 0.98

8 17 0.65 76 7.5 0.3 1 23 283 306 283 306 0.97

9 17 0.056 6.6 10.8 2.4 1 23 312 338 312 338 0.97

10 17 0.0001 0.012 19.5 1.0 1 23 344 367 344 367 0.96

11 17 0.0012 0.14 16.1 1.8 1 23 373 396 373 396 0.98

12 17 0.00069 0.081 16.9 0.9 1 23 402 425 402 425 0.98

13 17 0.00066 0.076 16.9 1.2 1 23 431 454 431 454 0.98

14 17 0.00057 0.066 17.1 1.5 1 23 460 483 460 483 0.98

15 17 5.8e-05 0.0068 20.2 1.0 1 23 489 512 489 512 0.98

16 17 0.0014 0.16 15.9 0.8 1 23 518 541 518 541 0.98

17 17 0.00023 0.027 18.3 3.4 1 23 547 570 547 570 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00023	0.027	18.3	0.7	1	23	19	42	19	42	0.97
2	17	0.24	28	8.8	5.8	1	23	109	132	109	132	0.97
3	17	0.00073	0.085	16.8	2.1	1	23	138	161	138	161	0.96
4	17	0.011	1.3	13.1	1.3	1	23	167	190	167	190	0.98
5	17	0.0022	0.26	15.3	1.1	1	23	196	219	196	219	0.98
6	17	0.00052	0.06	17.2	1.8	1	23	225	248	225	248	0.98
7	17	0.0009	0.11	16.5	1.2	1	23	254	277	254	277	0.98
8	17	0.65	76	7.5	0.3	1	23	283	306	283	306	0.97
9	17	0.056	6.6	10.8	2.4	1	23	312	338	312	338	0.97
10	17	0.0001	0.012	19.5	1.0	1	23	344	367	344	367	0.96
11	17	0.0012	0.14	16.1	1.8	1	23	373	396	373	396	0.98
12	17	0.00069	0.081	16.9	0.9	1	23	402	425	402	425	0.98
13	17	0.00066	0.076	16.9	1.2	1	23	431	454	431	454	0.98
14	17	0.00057	0.066	17.1	1.5	1	23	460	483	460	483	0.98
15	17	5.8e-05	0.0068	20.2	1.0	1	23	489	512	489	512	0.98
16	17	0.0014	0.16	15.9	0.8	1	23	518	541	518	541	0.98
17	17	0.00023	0.027	18.3	3.4	1	23	547	570	547	570	0.98

Sequence Information

Coding Sequence: ATGTACAACGCCGACTTCAAGCACCACACCAACGAGCATTACGAAGTGAAAATGTACAAGTGTGAAATTTGTCGCAGAAGATACAAGGCGAGGGAATCTCTCAGGGCGCACATGGAAAAAATTCATTCTGACAATGCAGGAAGAGATGTCCAAAATTACTCTAAGTGTGACTATTCCAAAGTTAATATTAAATATATGAAAGAGAGACCTACACACTCACACGATGGTGAAAAGCAATGTCCGTGCTCGAAATGCAAATTTCAAATATGGAACAAATGTCACTTAAAAGCACATGTAAAAATAAAACATCCGGACAGAGTCAAACATAAATGTGCACATTGTGAGTTTAAGACATATTACAGGTCTTATTTAGAAATGCACATGAAAATAAAACATCTCATGGGAAGTTATTATAAATGCAATGAGTGTCATTATCAGACAATCGTCAAGTCAAATTTGAAAGTACACATAAAGGCAAAACATCTCAAACAATTGGATTATAAATGCGCAGAATGTGAATACAAGACAAACAACAGGTTAACTTTAAAAGCACATGTGAAAACGAAACATCTTAAAGAATATGATTATAAATGCGGGGAGTGTGAATATAAGACAAACAGGAAGCGAGGCTTAAAACTACACGTTAAAACAATACATCTTAAAGAGCGCGACTATAAATGCGCAGAGTGTGAATACAAGACAAACTTCAAGACAAATTTAGAAAAGCACATAAAGACAATGCATCTTAAAGAATACGATTACAAATGCGCAGAGTGTGAGTACAAGACTAATTTCAAGTCAGATTTAAAAGCACACGTTAAAACGCAACACCTTAAAGAACACGTTTATAACTGCGCAGAATGTGAATTCAAGACAAATATCAAGCCGGGTTTAAAAGCTCACGTTAAAACGAAACATCTTAAAAAACCCGAGTATAAATGTGAATATAAGTGTGAGTGTGAATATAAGACAAACAACAAATCAACTTTAGGAATACATATAAAGACAATTCATCTTAATGAACACGATTATAAATGCACAGAGTGCGAATATAAGACAAACAGGAAATCAAGTTTAGCAAAACACATAAAGGCAATACATCGTAAAGAACTTGATTTTAAATGCGCTGAGTGTGAGTACAAAACAAACTTCAAGTCAACTTTAAAATCACACATAAAGACAATACATCGTAAAGAATACGATTACAGATGCAGAGAGTGTGAATACAAGACAAACAACAGGTCACTTTTAAAAGCACACGTGAACACGATACATCTTAAAGAACGCGATTATAAATGCTCAGAGTGTGAATACAAGACAAACAAGAAGTCAGGTTTAAAAGTACACGTTAAAACAATACATCTTAAAGACCGCGACTTTAAATGCGCAGAGTGTGAATACAAGACGAACTTCAAGACAAATTTAGAAAAACACATAAAGACAATACATCTTAAAGAATACGATTACAAATGCGCAGAGTGTGAGTACAAGACAAACAGGAAGTCAAGTTTAGCAAAACACATAAAGACAATACATCTTAAAGAACTTCATTATAAATGCGCAGAGTGTGAGTACAGGACTAATTACACGTCAAATTTAGAAGCACACGTGAAAACGAAACATCTTAATGAATACGATTATAAATGCGCAGAGTGTGAATACAAGACAAACAATAAGTCACATTTAGAAAGGCACCTAAAGAGAATGCATCTTGAGAAATCTGATTATAAATGTGCATAA
Protein Sequence: MYNADFKHHTNEHYEVKMYKCEICRRRYKARESLRAHMEKIHSDNAGRDVQNYSKCDYSKVNIKYMKERPTHSHDGEKQCPCSKCKFQIWNKCHLKAHVKIKHPDRVKHKCAHCEFKTYYRSYLEMHMKIKHLMGSYYKCNECHYQTIVKSNLKVHIKAKHLKQLDYKCAECEYKTNNRLTLKAHVKTKHLKEYDYKCGECEYKTNRKRGLKLHVKTIHLKERDYKCAECEYKTNFKTNLEKHIKTMHLKEYDYKCAECEYKTNFKSDLKAHVKTQHLKEHVYNCAECEFKTNIKPGLKAHVKTKHLKKPEYKCEYKCECEYKTNNKSTLGIHIKTIHLNEHDYKCTECEYKTNRKSSLAKHIKAIHRKELDFKCAECEYKTNFKSTLKSHIKTIHRKEYDYRCRECEYKTNNRSLLKAHVNTIHLKERDYKCSECEYKTNKKSGLKVHVKTIHLKDRDFKCAECEYKTNFKTNLEKHIKTIHLKEYDYKCAECEYKTNRKSSLAKHIKTIHLKELHYKCAECEYRTNYTSNLEAHVKTKHLNEYDYKCAECEYKTNNKSHLERHLKRMHLEKSDYKCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -