Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010001572.1:720179-721969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0024 0.28 15.1 2.8 1 23 19 42 19 42 0.97

2 19 0.0026 0.3 15.0 1.3 1 23 48 71 48 71 0.98

3 19 0.0026 0.3 15.0 1.3 1 23 77 100 77 100 0.98

4 19 0.0013 0.15 16.0 2.1 1 23 135 158 135 158 0.98

5 19 0.015 1.7 12.7 0.4 1 23 164 187 164 187 0.96

6 19 0.00021 0.025 18.5 1.6 1 23 193 216 193 216 0.96

7 19 0.0038 0.44 14.5 0.5 1 23 222 245 222 245 0.94

8 19 0.0082 0.95 13.5 0.7 1 23 251 274 251 274 0.96

9 19 0.0023 0.27 15.2 0.7 1 23 280 303 280 303 0.96

10 19 0.0012 0.14 16.1 0.6 1 23 309 332 309 332 0.96

11 19 0.0022 0.26 15.3 0.8 1 23 338 361 338 361 0.96

12 19 0.019 2.2 12.3 1.6 1 23 367 390 367 390 0.98

13 19 0.0019 0.23 15.4 0.7 1 23 396 419 396 419 0.96

14 19 0.00033 0.038 17.9 0.8 1 23 425 448 425 448 0.98

15 19 2 2.3e+02 6.0 2.9 1 23 454 477 454 477 0.95

16 19 0.01 1.2 13.2 0.6 1 23 483 506 483 506 0.96

17 19 0.00047 0.055 17.4 1.7 1 23 512 535 512 535 0.96

18 19 0.0068 0.8 13.7 1.0 1 23 541 564 541 564 0.96

19 19 0.041 4.7 11.3 5.2 2 23 571 593 570 593 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0024	0.28	15.1	2.8	1	23	19	42	19	42	0.97
2	19	0.0026	0.3	15.0	1.3	1	23	48	71	48	71	0.98
3	19	0.0026	0.3	15.0	1.3	1	23	77	100	77	100	0.98
4	19	0.0013	0.15	16.0	2.1	1	23	135	158	135	158	0.98
5	19	0.015	1.7	12.7	0.4	1	23	164	187	164	187	0.96
6	19	0.00021	0.025	18.5	1.6	1	23	193	216	193	216	0.96
7	19	0.0038	0.44	14.5	0.5	1	23	222	245	222	245	0.94
8	19	0.0082	0.95	13.5	0.7	1	23	251	274	251	274	0.96
9	19	0.0023	0.27	15.2	0.7	1	23	280	303	280	303	0.96
10	19	0.0012	0.14	16.1	0.6	1	23	309	332	309	332	0.96
11	19	0.0022	0.26	15.3	0.8	1	23	338	361	338	361	0.96
12	19	0.019	2.2	12.3	1.6	1	23	367	390	367	390	0.98
13	19	0.0019	0.23	15.4	0.7	1	23	396	419	396	419	0.96
14	19	0.00033	0.038	17.9	0.8	1	23	425	448	425	448	0.98
15	19	2	2.3e+02	6.0	2.9	1	23	454	477	454	477	0.95
16	19	0.01	1.2	13.2	0.6	1	23	483	506	483	506	0.96
17	19	0.00047	0.055	17.4	1.7	1	23	512	535	512	535	0.96
18	19	0.0068	0.8	13.7	1.0	1	23	541	564	541	564	0.96
19	19	0.041	4.7	11.3	5.2	2	23	571	593	570	593	0.97

Sequence Information

Coding Sequence: ATGTACAACGCAGACTTCAGGCACCACACTAACGAGCATTGCCAGGTGAAAAAATACAAATGTGGAATTTGTGACCGAAGATATAAGAGGAAGGAATATCTGAATTTCCACGTAAAAACGAAGCACATTGGAGAAAGAAATTATAAATGCGCAGAGTGTGAATTCAAAACAAACTACAAGTCATATTTACAAGTACACATAAAAGTAAAGCACCGTAATGAAAATAATTATAAATGCGCAGAGTGTGAATTCAAGACAAACTACAAGTCATATTTACAAGTACACATAAAAGTAAAACATCTCAAAAAAAATGATTATAGATGCATAGAGTGTGAATTCAAGACGAACTGCAAGTCACATTTGAAACGTCACATAAAAGTAAAACATCTGAAAGAAAATGATTATAAATGCACAGAGTGCGAATTCAAGACAAACTACAAGTCATATTTACAAGTACACATAAAAGTAAAACATCTCAAAAAAAATGATTATAAATGCGCAGAGTGTGAATTCGAGACAAATTACAATTCATATTTACAAGTACACATACAAGCAAAGCATCTTAATGAAAATTATTATAAATGCGCAGAGTGTAATTTCAAAACAAACTACAAGTCAAATTTACAAGCACACATGAAAGCAAAGCATCTCAAAAAAAATTATTATAAATGCGCGGAGTGTGAATTCGAGACAAGCAACAAGTCATATTTACAAGTACATATAACAGCAAAGCATCTTAATGAAAATAATTATAAATGCGCAGAATGTGAATTCGAGACAAATTACAAGTCATATTTACAAGTACACATAAAAGCAAAGCATCTTAATGAAAATAATTATAAATGCGCAGAATGTGATTTCGAGACAAATTACAAGTCATATTTACAAGTACACATAAAAGCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATTCGAGACAAGCAACAAGTCATATTTACAAGTACACATAAAAGCAAAGCATCTTAATGAAAGTAATTATAAGTGCGCAGAATGTGAATTCAAAACAAACTACAAGGCCAATTTACAAATACACATGAAAGCAAAGCATCTCAAAAAAGAGAATTACAAATGCGCAGAGTGTGAATTCAAGACAAACTACAAGTCGAAGTTGAAAGGTCACATAAAAGTAAAGCATCTGAAAGAAAATGATTATAAATGCGCAGAGTGTGAATACAAGACAAACTATAAGTCAGCTTTAAAAGTACACATAAAAGGAAAACATCTGAAACAAAACGATTATAAATGCGCAGAGTGTGAATACAAGACAAACTACAAGTCAAATTTAGAAATTCACATAAAAGTAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATTCGAGACCAACTGCAAGTCATATTTACAAAGACACGTAAAAGCAAAGCATCTCAAAAAAGAGAATTACAAATGCGCAGAGTGTGAATTCGAGACAAATTACAAGTCATATTTACAAGTACACATACAAGCAAAGCATCTTAAACAAAATGATTATAAATGCACAGAGTGTGAATACAAGACAAGCTACAAGACAAATTTACAAATACACATAAAAGCCAAGCATCTTAAAGAAAAAGATTATAAATGCGCAGAGTGTGAATTCAAAACAAACTACAAGTCATATTTACAAGTACACATAAACGCAAAGCATCTCAAAAAAAATTATAATAAATGCAGAGAGTGTGAATTTACGACAAATTACAAGTCTCATTTAAGGAAACACGTAAAATCGAAACATCTGAATCTATAA
Protein Sequence: MYNADFRHHTNEHCQVKKYKCGICDRRYKRKEYLNFHVKTKHIGERNYKCAECEFKTNYKSYLQVHIKVKHRNENNYKCAECEFKTNYKSYLQVHIKVKHLKKNDYRCIECEFKTNCKSHLKRHIKVKHLKENDYKCTECEFKTNYKSYLQVHIKVKHLKKNDYKCAECEFETNYNSYLQVHIQAKHLNENYYKCAECNFKTNYKSNLQAHMKAKHLKKNYYKCAECEFETSNKSYLQVHITAKHLNENNYKCAECEFETNYKSYLQVHIKAKHLNENNYKCAECDFETNYKSYLQVHIKAKHLKQNDYKCAECEFETSNKSYLQVHIKAKHLNESNYKCAECEFKTNYKANLQIHMKAKHLKKENYKCAECEFKTNYKSKLKGHIKVKHLKENDYKCAECEYKTNYKSALKVHIKGKHLKQNDYKCAECEYKTNYKSNLEIHIKVKHLKQNDYKCAECEFETNCKSYLQRHVKAKHLKKENYKCAECEFETNYKSYLQVHIQAKHLKQNDYKCTECEYKTSYKTNLQIHIKAKHLKEKDYKCAECEFKTNYKSYLQVHINAKHLKKNYNKCRECEFTTNYKSHLRKHVKSKHLNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -