Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000534.1:144403-146280[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.92 1.1e+02 7.0 6.0 1 23 38 60 38 60 0.98

2 16 0.0013 0.16 15.9 1.1 1 23 66 89 66 89 0.97

3 16 0.038 4.4 11.4 2.7 1 23 156 179 156 179 0.97

4 16 0.00013 0.015 19.1 0.8 1 23 240 263 240 263 0.98

5 16 0.038 4.5 11.4 5.2 1 23 269 292 269 292 0.98

6 16 0.0091 1.1 13.3 0.2 1 23 298 321 298 321 0.98

7 16 0.0003 0.035 18.0 0.8 1 23 327 350 327 350 0.98

8 16 0.00057 0.066 17.1 3.1 1 23 356 379 356 379 0.98

9 16 0.0013 0.15 16.0 4.2 1 23 385 408 385 408 0.98

10 16 0.00028 0.033 18.1 0.8 1 23 414 437 414 437 0.98

11 16 0.00068 0.079 16.9 0.6 1 23 443 466 443 466 0.98

12 16 0.00026 0.03 18.2 3.1 1 23 472 495 472 495 0.98

13 16 0.00054 0.063 17.2 4.0 1 23 501 524 501 524 0.98

14 16 0.0014 0.16 15.9 0.3 1 23 530 553 530 553 0.96

15 16 0.0011 0.12 16.3 1.3 1 23 559 582 559 582 0.98

16 16 7.3e-05 0.0085 19.9 1.0 1 23 588 611 588 611 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.92	1.1e+02	7.0	6.0	1	23	38	60	38	60	0.98
2	16	0.0013	0.16	15.9	1.1	1	23	66	89	66	89	0.97
3	16	0.038	4.4	11.4	2.7	1	23	156	179	156	179	0.97
4	16	0.00013	0.015	19.1	0.8	1	23	240	263	240	263	0.98
5	16	0.038	4.5	11.4	5.2	1	23	269	292	269	292	0.98
6	16	0.0091	1.1	13.3	0.2	1	23	298	321	298	321	0.98
7	16	0.0003	0.035	18.0	0.8	1	23	327	350	327	350	0.98
8	16	0.00057	0.066	17.1	3.1	1	23	356	379	356	379	0.98
9	16	0.0013	0.15	16.0	4.2	1	23	385	408	385	408	0.98
10	16	0.00028	0.033	18.1	0.8	1	23	414	437	414	437	0.98
11	16	0.00068	0.079	16.9	0.6	1	23	443	466	443	466	0.98
12	16	0.00026	0.03	18.2	3.1	1	23	472	495	472	495	0.98
13	16	0.00054	0.063	17.2	4.0	1	23	501	524	501	524	0.98
14	16	0.0014	0.16	15.9	0.3	1	23	530	553	530	553	0.96
15	16	0.0011	0.12	16.3	1.3	1	23	559	582	559	582	0.98
16	16	7.3e-05	0.0085	19.9	1.0	1	23	588	611	588	611	0.98

Sequence Information

Coding Sequence: ATGTCTTTTGTTTTCAGAGACTGCGCACTTTCCTCAGTGGAGGTATGCGAGCTACAAGTAGAAAGGCGTTCATCTGTTCAGCGTAAGGCCAAAAGACGGAAGCGTGGAATATACAAATGTACACAATGCAAGTTCAGAACTATGTACAACGCCCAGTTGAGGCACCACTCCAATAAGCATTATGAGGTTAAAATGTACAAATGTGGAATTTGTCGTAGAAGATACAAGGCGAAGAAATCTCTCAAGGCGCACTTGGAAAAAATTCATATTGACAATGCAGGAAGAGGTATCCAAAAATACTCTGAATGTGACTATTTCAAAGCTAAAATGAAAAATATGAAAGAGAGATCTGCACACTCACATGATGGCGAAATAAAATGTCCATGCTCGAAATGGAAAATTCAAACAAGGAACAAATGTCAGTCAAAATCATATATAAAAATAAGTAATCCAAAGAGAGGCAAATATAAGTGCGCATATTGCGAGTTTAAGACCTATTACAGGTCTTATTTAGAAATGCACATGACAATGAAACATATCATGGAAAGTTATTATAAACGCAGGGAGTGTCAAGACCAGACGAATTTCAAGTCAAGTTTAGAAGTACAGATAAACACGAAACATGTGAAACAAAGGGATTATAAATGTGCAGAGCATGAATACAAGACAACTTGTTTAAAAGCACACATACAGACAATACATCTTAAAGGACACAATTACAAATGCGCAGAGTGTGAATACAAGACAAGCAGGAAGCAAGAATTAGTAAGACATATAAAGACAATACATCTTAAAATACACGATTATAAATGCGCGCAGTGTGAATACAAGACAAATCACAAGCCGCATTTGAAAGTACACGTGAAAACGAAACATCTTAAAGAACACGATTACAAATGCGCAGAGTGTGAGTACATGACAAATTACAAGCCGGCCTTAGTAAAACACGTAAAGACAATACATCTTAAAGAACGAGATTATAAATGCGCAGAGTGTGAATACAAGACAAATTACAAGTCAGGTTTAGAAAAACACATAAAGACAATTCATCTTAAAGAACACGATTATAAGTGCGCAAAGTGTAAATACAAGACAAATAGGAAGACAACTTTAGAGAAACATATAAAGACAATACATCTTAATGTAAGAGATTATAAATGCGCAAAGTGTGACTTCAAGACAAATGACAAGTCTCATTTAAAAATACACGTGAAAACGAAACATCTTGCAGAACACGATTACAAATGCGTAGAGTGTGAGTACAAGACAAGCAGGAAGTTAGATTTAGAAAGACACATAAAGACAATACATCTTAAAGAATTCGATTATAAATGCGCAGAATGTGAATACAAGACAAATTACAAGTCAGGTTTAGAAACACACATAAAGACAGTACATCTTAAAGAACACGATTATAAATGCACAAAGTGTGAATACAAGACAAACAGGAAGACAACTTTAGAAAAACATATAAAGACAATACATCTTAACGTAAAAGATTATAAATGCCCAAAGTGTGAATTCAAGACAAATGACAAGTCTCATTTAAAAATACATGTGAAAACGAAACATCTTGAAGAACACGATTACAAATGCGCAGGGTGTGAATACAAAACAAGCAGAAAGTTAGATTTAGAAAGACACATAAAGGGAATACATGTTAAAGAATACGATTATAAATGCGCGGACTGTGAATACAAGACGAATTACAAGTCAAGTTTAGGAAAACACATAAAGACAATGCATCTTAAAGAACAGAATTATAAATGCGTTGAGTGTGAATACAAGACAAGCAGGAAGCAAGATTTAGAAAGACACATAAAGACAATACATCTTAAAAACCTAGACCTAGGTTTTGTTATGGGCCTAGCAATGTAA
Protein Sequence: MSFVFRDCALSSVEVCELQVERRSSVQRKAKRRKRGIYKCTQCKFRTMYNAQLRHHSNKHYEVKMYKCGICRRRYKAKKSLKAHLEKIHIDNAGRGIQKYSECDYFKAKMKNMKERSAHSHDGEIKCPCSKWKIQTRNKCQSKSYIKISNPKRGKYKCAYCEFKTYYRSYLEMHMTMKHIMESYYKRRECQDQTNFKSSLEVQINTKHVKQRDYKCAEHEYKTTCLKAHIQTIHLKGHNYKCAECEYKTSRKQELVRHIKTIHLKIHDYKCAQCEYKTNHKPHLKVHVKTKHLKEHDYKCAECEYMTNYKPALVKHVKTIHLKERDYKCAECEYKTNYKSGLEKHIKTIHLKEHDYKCAKCKYKTNRKTTLEKHIKTIHLNVRDYKCAKCDFKTNDKSHLKIHVKTKHLAEHDYKCVECEYKTSRKLDLERHIKTIHLKEFDYKCAECEYKTNYKSGLETHIKTVHLKEHDYKCTKCEYKTNRKTTLEKHIKTIHLNVKDYKCPKCEFKTNDKSHLKIHVKTKHLEEHDYKCAGCEYKTSRKLDLERHIKGIHVKEYDYKCADCEYKTNYKSSLGKHIKTMHLKEQNYKCVECEYKTSRKQDLERHIKTIHLKNLDLGFVMGLAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -