Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000534.1:570101-571618[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.9 2.2e+02 6.1 6.0 1 23 2 24 2 24 0.98

2 17 0.018 2.1 12.4 6.0 1 23 30 53 30 53 0.96

3 17 0.00011 0.012 19.4 1.7 1 23 59 82 59 82 0.98

4 17 0.0071 0.83 13.7 0.8 1 23 88 111 88 111 0.97

5 17 0.0058 0.67 13.9 1.9 1 23 117 140 117 140 0.98

6 17 0.00078 0.091 16.7 2.9 1 23 146 169 146 169 0.98

7 17 0.00026 0.03 18.2 1.2 1 23 175 198 175 198 0.98

8 17 0.00059 0.069 17.1 2.8 1 23 204 227 204 227 0.98

9 17 1e-05 0.0012 22.6 1.8 1 23 233 256 233 256 0.98

10 17 2.8e-05 0.0033 21.2 1.3 1 23 262 285 262 285 0.98

11 17 0.0006 0.07 17.0 2.0 1 23 291 314 291 314 0.98

12 17 0.00054 0.063 17.2 3.2 1 23 329 352 329 352 0.98

13 17 0.0092 1.1 13.3 2.8 1 23 358 381 358 381 0.98

14 17 0.0024 0.28 15.1 3.6 1 23 387 410 387 411 0.97

15 17 0.005 0.58 14.1 1.2 1 23 416 439 416 439 0.98

16 17 0.0052 0.6 14.1 1.8 1 23 445 468 445 468 0.96

17 17 8.1e-05 0.0095 19.8 3.1 1 23 474 497 474 497 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.9	2.2e+02	6.1	6.0	1	23	2	24	2	24	0.98
2	17	0.018	2.1	12.4	6.0	1	23	30	53	30	53	0.96
3	17	0.00011	0.012	19.4	1.7	1	23	59	82	59	82	0.98
4	17	0.0071	0.83	13.7	0.8	1	23	88	111	88	111	0.97
5	17	0.0058	0.67	13.9	1.9	1	23	117	140	117	140	0.98
6	17	0.00078	0.091	16.7	2.9	1	23	146	169	146	169	0.98
7	17	0.00026	0.03	18.2	1.2	1	23	175	198	175	198	0.98
8	17	0.00059	0.069	17.1	2.8	1	23	204	227	204	227	0.98
9	17	1e-05	0.0012	22.6	1.8	1	23	233	256	233	256	0.98
10	17	2.8e-05	0.0033	21.2	1.3	1	23	262	285	262	285	0.98
11	17	0.0006	0.07	17.0	2.0	1	23	291	314	291	314	0.98
12	17	0.00054	0.063	17.2	3.2	1	23	329	352	329	352	0.98
13	17	0.0092	1.1	13.3	2.8	1	23	358	381	358	381	0.98
14	17	0.0024	0.28	15.1	3.6	1	23	387	410	387	411	0.97
15	17	0.005	0.58	14.1	1.2	1	23	416	439	416	439	0.98
16	17	0.0052	0.6	14.1	1.8	1	23	445	468	445	468	0.96
17	17	8.1e-05	0.0095	19.8	3.1	1	23	474	497	474	497	0.98

Sequence Information

Coding Sequence: ATGTACAAATGTACGCAATGCAAGTTCAGAACAATGTACAACGCCGATTTCAGGCACCACACTAACCAGCATTACCAGGTGAAAATGCACAAATGTAGAATTTGTCACAGAAGATACAAGGCGAAGGAATCTCTCAAGACTCACATTAAAGAAAAACATCTGCAACAAAGGGATTACAAATGTACAGGGTGTGAATTCAAAACAAATTACAAGTCAAATTTGGAAGCACACATAAAGACAAAACACCTCAAACAAAAGGATTACAAGTGCGCAGAGTGTGAATTCGAAACAAATTACAAGTCATATTTACAAGTACACATAGAAAGAAAACATCTGAAACAAAATTATTATCAATGCGCAGAGTGTGAATTCAGGACACATAACAGGTCATATTTGCAAACACACATAAAAATAATACATCTTAAAATAAGCGATTTTAAATGTGCAGAGTGTGAATACAAGACAAATAACAAGTCGCATTTAAGAGAACACACAAATACAATACATCTTAAAGAATACGATTATAAATGTACAGCGTGTGAATACAAGACAAATAACAAGTCAAATTTAAAAGCACATGTAAAGACGATACATCTTAAAGAACATAATTATAAATGCACAGAGTGTGAATACAAGACAAGTAACAAGTTACATTTAAAAGCACACGTAAAGACAATACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAAACGAATAGGAAGTCATCTTTAGAAAGACACATAAAGACAATACATCTTGACGTTAGCGATTATAAATGCGCAGACTGTGAATACAAGACAAATGACAAGTCACATTTAAAAGCACATATAATGACAATACATCTTAAAGAATACGATTATAAATGCGCAGAGTGTGAATACAAAACAAATAACGTGTCACATTTAAAATCACACATAAAGACAATACATCTTAAGCAATACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGTACAGAGTGTGAATACAAAACAAATAACAAGTCGCATTTAAAAGGACACGTGAAAACGATACATCTGAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAGACAAACGATAAGTCATGCTTAGGAAGACACACAAAGACAATACATCTTAAAGAATACGATTATAAATGCACAGCGTGTGAATACAAGACAAACAACAAGTCATCTTTAGAAAGACACACAAAGACAATACATCATAAAGAATACAATCATAAATGCGCAGTATGTGAATACAAGACAAGTAAGCAGTTGGATTTAAAAGCACACATAAAGACAATACATCTTAAAGAATACGATTATAAATGCACAGAGTGTGTCTACAAGACAAATAGGAAGTTATCTTTAAAAAAACACATAAAGGCAATGCATCTTAAAGAACACGATTATAAATGTCCAGAATGTGAATACAAAACAAACTACAAGTTTAATTTACAAACACACATGAAAACAAAACATCTGACGGCAATTGCCTCACAAACCTAA
Protein Sequence: MYKCTQCKFRTMYNADFRHHTNQHYQVKMHKCRICHRRYKAKESLKTHIKEKHLQQRDYKCTGCEFKTNYKSNLEAHIKTKHLKQKDYKCAECEFETNYKSYLQVHIERKHLKQNYYQCAECEFRTHNRSYLQTHIKIIHLKISDFKCAECEYKTNNKSHLREHTNTIHLKEYDYKCTACEYKTNNKSNLKAHVKTIHLKEHNYKCTECEYKTSNKLHLKAHVKTIHLKEHDYKCTECEYKTNRKSSLERHIKTIHLDVSDYKCADCEYKTNDKSHLKAHIMTIHLKEYDYKCAECEYKTNNVSHLKSHIKTIHLKQYVKTKHLKEHDYKCTECEYKTNNKSHLKGHVKTIHLKEHDYKCAECEYKTNDKSCLGRHTKTIHLKEYDYKCTACEYKTNNKSSLERHTKTIHHKEYNHKCAVCEYKTSKQLDLKAHIKTIHLKEYDYKCTECVYKTNRKLSLKKHIKAMHLKEHDYKCPECEYKTNYKFNLQTHMKTKHLTAIASQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -