Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000622.1:835351-837954[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.075 8.8 10.4 2.6 1 23 22 44 22 44 0.97

2 27 3.4e-05 0.004 21.0 1.1 1 23 50 73 50 73 0.95

3 27 1.1 1.3e+02 6.7 1.7 1 23 136 159 136 159 0.97

4 27 2.5 3e+02 5.6 0.4 5 23 170 190 168 190 0.89

5 27 0.014 1.6 12.8 1.5 1 23 194 217 194 217 0.98

6 27 0.00036 0.041 17.8 1.9 1 23 223 246 223 246 0.98

7 27 0.0052 0.61 14.1 3.3 1 23 253 276 253 276 0.98

8 27 0.0056 0.65 14.0 2.2 1 23 282 305 282 305 0.98

9 27 0.18 21 9.2 0.6 1 23 311 334 311 334 0.98

10 27 0.18 21 9.2 4.0 1 23 340 363 340 363 0.98

11 27 0.00065 0.075 16.9 0.7 1 23 369 392 369 392 0.98

12 27 0.017 2 12.5 3.2 1 23 398 421 398 421 0.98

13 27 0.0027 0.32 15.0 3.2 1 23 427 450 427 450 0.98

14 27 0.14 16 9.6 0.9 1 23 456 479 456 479 0.98

15 27 0.0016 0.19 15.7 0.7 1 23 485 508 485 508 0.98

16 27 0.001 0.12 16.3 0.8 1 23 514 537 514 537 0.98

17 27 2.2 2.6e+02 5.8 3.3 1 23 543 566 543 566 0.96

18 27 0.021 2.5 12.2 3.9 1 23 572 595 572 595 0.98

19 27 0.027 3.1 11.9 2.4 1 23 601 624 601 624 0.98

20 27 0.0001 0.012 19.5 1.1 1 23 630 653 630 653 0.98

21 27 0.0076 0.88 13.6 4.9 1 23 659 682 659 682 0.98

22 27 0.00029 0.034 18.0 1.0 1 23 688 711 688 711 0.98

23 27 0.24 28 8.8 3.5 1 23 717 740 717 740 0.98

24 27 7.3 8.6e+02 4.2 0.2 1 17 746 762 746 763 0.93

25 27 0.072 8.4 10.5 2.2 1 23 775 798 775 798 0.98

26 27 3.9 4.6e+02 5.0 1.4 1 23 804 827 804 827 0.97

27 27 0.0067 0.78 13.8 0.8 1 23 833 856 833 856 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.075	8.8	10.4	2.6	1	23	22	44	22	44	0.97
2	27	3.4e-05	0.004	21.0	1.1	1	23	50	73	50	73	0.95
3	27	1.1	1.3e+02	6.7	1.7	1	23	136	159	136	159	0.97
4	27	2.5	3e+02	5.6	0.4	5	23	170	190	168	190	0.89
5	27	0.014	1.6	12.8	1.5	1	23	194	217	194	217	0.98
6	27	0.00036	0.041	17.8	1.9	1	23	223	246	223	246	0.98
7	27	0.0052	0.61	14.1	3.3	1	23	253	276	253	276	0.98
8	27	0.0056	0.65	14.0	2.2	1	23	282	305	282	305	0.98
9	27	0.18	21	9.2	0.6	1	23	311	334	311	334	0.98
10	27	0.18	21	9.2	4.0	1	23	340	363	340	363	0.98
11	27	0.00065	0.075	16.9	0.7	1	23	369	392	369	392	0.98
12	27	0.017	2	12.5	3.2	1	23	398	421	398	421	0.98
13	27	0.0027	0.32	15.0	3.2	1	23	427	450	427	450	0.98
14	27	0.14	16	9.6	0.9	1	23	456	479	456	479	0.98
15	27	0.0016	0.19	15.7	0.7	1	23	485	508	485	508	0.98
16	27	0.001	0.12	16.3	0.8	1	23	514	537	514	537	0.98
17	27	2.2	2.6e+02	5.8	3.3	1	23	543	566	543	566	0.96
18	27	0.021	2.5	12.2	3.9	1	23	572	595	572	595	0.98
19	27	0.027	3.1	11.9	2.4	1	23	601	624	601	624	0.98
20	27	0.0001	0.012	19.5	1.1	1	23	630	653	630	653	0.98
21	27	0.0076	0.88	13.6	4.9	1	23	659	682	659	682	0.98
22	27	0.00029	0.034	18.0	1.0	1	23	688	711	688	711	0.98
23	27	0.24	28	8.8	3.5	1	23	717	740	717	740	0.98
24	27	7.3	8.6e+02	4.2	0.2	1	17	746	762	746	763	0.93
25	27	0.072	8.4	10.5	2.2	1	23	775	798	775	798	0.98
26	27	3.9	4.6e+02	5.0	1.4	1	23	804	827	804	827	0.97
27	27	0.0067	0.78	13.8	0.8	1	23	833	856	833	856	0.96

Sequence Information

Coding Sequence: ATGCTACAAGCACAAAAGCGTTCATCTGTAAGAATCAAATCCAAAAAATGGATGTGGGGTCTGTACAAATGTACGCAATGCAAGTTCAGAACAATATATAACGCCGACTTCAGGCGCCACACTAACGCGCATTGCGAGATGAAAATGTATAAATGTGGAATGTGTGACAGAAGATACAAGACGAAGAAATCTCTCAAGGTGCACATGGAAGAAATTCATGCCGTCAATGAAAAAAGAGATGTCGAAATATACTCTACGTGTGACTTTTTCAAAGCTAATATTGAAAGTATAAACGAGAGATCTCCTGGTGAAAAACAATGTAAAAGCTCGAAATGCAAGTCTCAAACACGGGACAAATTTCACTTAAAGTCACGTATAAAAATAAAACATCTGAACAGAGGCAAATATAAATGCGCAAATTGCGAGTTTAAGACATATTACAGAATTGATTTAGAAATGCACACGAAAATGAAACATCTCACGATGGAAACCCATAATACACGCAGGAAATGTGAATTCATGACAAACTACAAGTCACTCTTGGAAAGACACATAATAACAAAAGATCATAAACAAAAATATAAATGCGGGGAGTGTGAATTTAAGGCAAACTACAAGTCAGTCCTGAAAAGACACATAAAAACAAAACATCTAAAACAAGAATATTATAAATGCGCAGACTGTGAATTTAAGACGAGCTACAAGTCAAATTTACAAGTCCACATAAAAAGAAAACATCTGAAACAAGAAGATTGTTATAAATGTGCACAGTGTGAATTTAAGACGAGCCACAAGTCATATTTACAAGTCCACATAAAAATAAAACATCTGAAACAAAATTGTTTTAAATGCACAGAGTGTGAATTTAAAACAAGCTACAAGATAAATTTACAACTACACATAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAATTGTCAAGACAAGGTTAGAAATGCACATAAAAACAAGACATCTAAAACAAAATGATTATAAGTGCGTAGAATGTGAATACCAGACGAACAACAAGTCACGTTTCCATGTCCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCAAACTTAGAAGGGCACATAAAAACAAAACATCTGGAACAAGAAGATTATAAATGCACAGAGTGTGAATTTAAGACAAACATCAAGTCATATTTAAAGAACCACATAAAGAGAAAACATCTAAAACAATATGATTATAAATGCGCAGAGTGTGAATTTAAAACAAGCTACAAGTCACATTTACGAGTACACATACAATCAAAACATTTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAATGTCAAAACAAGGTTAGAAATGCACATAAAAACACGACATCTAAAACCAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAATAACAAGTCAAACTTGGACGCCCACGTAAAAACAAAACATCTGAATCAATATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCAAACTTGGACGCCCACATAAAAAGAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATTTAAGACGAGCTGCAAGTCATATTTGAAAGCCCACGTAGAGAGAAAACATCTGAAACGAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACTATAAGTCATGTTTGAAAGAACACATAAAGACAAAACATCTAGAACAACATGATTATAAATGTGCGAAGTGTCAATTCAAGACAAACATCAAGTCATATTTACAAGTCCACATCAAAACAAAACATCTGAAACAATATGATTATAAATGCGTAGAGTGTGAATACAAGACAAACAACAAGTCAAACTTGGAGGTCCACATAAAAACAAAACATCTGAAACAAAATGATTTTAAATGTGTAGAGTGTGAATACCAGACACACAACAAGTCACATTTACAAGCCCACATCAAAACTAAACATCTGAAACAATATGATTATAAATGCGCAGAGTGTGAATACAAGACAAACAACAAGTCAAACTTGGAAATCCACGTAAAAACAAAACATCTGAATCCATATGATTATAAATGCGCAGAGTGTGATTACAAGACAAACTGCAAGTCAAAGTTAGAAGTCCACATTAAAAGAAAACATGTGAAACAAAATGATTATAAGTGTGTAGAGTGTGAATACCAGACAAACAAGGAGTCAAACTTAGAAGCCCTCGTAAACACAAAACATCCGGTACAAAGTGATTATAAATGCGCAGAGTGTAAATATCAGACAAACAGCAAGTCAAGCGTAGAAATGCACTTTAGAACAAAACATCTGAAACAAAGCCGTTATAAATGCGCTCGGTGTCTATATCAGACAAACCTCAAGTCAGTCTTGGAGACACACATAAAAAGAAAACATCTGACGCAAAATGATTATGAATGCACGGAATGCGAATTCAAGACGAACTACAAGTCTACTTTAGAAGTGCACATAAAAGCAAAACATCTTAAGGCGGTTTGCTCTCTTTCCGAAATTTGTTAA
Protein Sequence: MLQAQKRSSVRIKSKKWMWGLYKCTQCKFRTIYNADFRRHTNAHCEMKMYKCGMCDRRYKTKKSLKVHMEEIHAVNEKRDVEIYSTCDFFKANIESINERSPGEKQCKSSKCKSQTRDKFHLKSRIKIKHLNRGKYKCANCEFKTYYRIDLEMHTKMKHLTMETHNTRRKCEFMTNYKSLLERHIITKDHKQKYKCGECEFKANYKSVLKRHIKTKHLKQEYYKCADCEFKTSYKSNLQVHIKRKHLKQEDCYKCAQCEFKTSHKSYLQVHIKIKHLKQNCFKCTECEFKTSYKINLQLHIKSKHLKQNDYKCAECEYQTIVKTRLEMHIKTRHLKQNDYKCVECEYQTNNKSRFHVHIKTKHLKQNDYKCAECEYQTNNKSNLEGHIKTKHLEQEDYKCTECEFKTNIKSYLKNHIKRKHLKQYDYKCAECEFKTSYKSHLRVHIQSKHLKQNDYKCAECEYQTNVKTRLEMHIKTRHLKPNDYKCAECEYQTNNKSNLDAHVKTKHLNQYDYKCAECEYQTNNKSNLDAHIKRKHLKQNDYKCAECEFKTSCKSYLKAHVERKHLKRNDYKCAECEYQTNYKSCLKEHIKTKHLEQHDYKCAKCQFKTNIKSYLQVHIKTKHLKQYDYKCVECEYKTNNKSNLEVHIKTKHLKQNDFKCVECEYQTHNKSHLQAHIKTKHLKQYDYKCAECEYKTNNKSNLEIHVKTKHLNPYDYKCAECDYKTNCKSKLEVHIKRKHVKQNDYKCVECEYQTNKESNLEALVNTKHPVQSDYKCAECKYQTNSKSSVEMHFRTKHLKQSRYKCARCLYQTNLKSVLETHIKRKHLTQNDYECTECEFKTNYKSTLEVHIKAKHLKAVCSLSEIC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -