Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010005970.1:1755722-1757564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00081 0.095 16.6 2.4 1 23 19 42 19 42 0.98

2 20 0.0078 0.91 13.5 1.5 1 23 48 71 48 71 0.97

3 20 0.0029 0.34 14.9 3.3 1 23 77 100 77 100 0.96

4 20 7.6e-05 0.0088 19.9 0.9 1 23 106 129 106 129 0.96

5 20 0.0064 0.74 13.8 2.2 1 23 135 158 135 158 0.96

6 20 0.0007 0.082 16.8 1.7 1 23 164 187 164 187 0.96

7 20 0.018 2.1 12.4 0.6 1 23 193 216 193 216 0.95

8 20 0.0018 0.21 15.5 1.6 1 23 222 245 222 245 0.97

9 20 0.0057 0.66 14.0 3.0 1 23 251 274 251 274 0.95

10 20 0.0039 0.46 14.5 2.8 1 23 280 303 280 303 0.96

11 20 0.00042 0.049 17.5 2.2 1 23 309 332 309 332 0.97

12 20 0.0007 0.082 16.8 3.1 1 23 338 361 338 361 0.96

13 20 0.00042 0.049 17.5 2.2 1 23 367 390 367 390 0.97

14 20 0.00085 0.099 16.6 1.7 1 23 396 419 396 419 0.98

15 20 0.4 47 8.2 0.2 5 23 439 458 425 458 0.85

16 20 0.0053 0.62 14.1 1.6 1 23 464 487 464 487 0.96

17 20 0.018 2.1 12.4 0.6 1 23 493 516 493 516 0.95

18 20 0.0013 0.16 15.9 1.3 1 23 522 545 522 545 0.97

19 20 0.0022 0.25 15.3 1.1 1 23 551 574 551 574 0.96

20 20 7.4 8.6e+02 4.2 0.9 1 16 580 595 580 595 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00081	0.095	16.6	2.4	1	23	19	42	19	42	0.98
2	20	0.0078	0.91	13.5	1.5	1	23	48	71	48	71	0.97
3	20	0.0029	0.34	14.9	3.3	1	23	77	100	77	100	0.96
4	20	7.6e-05	0.0088	19.9	0.9	1	23	106	129	106	129	0.96
5	20	0.0064	0.74	13.8	2.2	1	23	135	158	135	158	0.96
6	20	0.0007	0.082	16.8	1.7	1	23	164	187	164	187	0.96
7	20	0.018	2.1	12.4	0.6	1	23	193	216	193	216	0.95
8	20	0.0018	0.21	15.5	1.6	1	23	222	245	222	245	0.97
9	20	0.0057	0.66	14.0	3.0	1	23	251	274	251	274	0.95
10	20	0.0039	0.46	14.5	2.8	1	23	280	303	280	303	0.96
11	20	0.00042	0.049	17.5	2.2	1	23	309	332	309	332	0.97
12	20	0.0007	0.082	16.8	3.1	1	23	338	361	338	361	0.96
13	20	0.00042	0.049	17.5	2.2	1	23	367	390	367	390	0.97
14	20	0.00085	0.099	16.6	1.7	1	23	396	419	396	419	0.98
15	20	0.4	47	8.2	0.2	5	23	439	458	425	458	0.85
16	20	0.0053	0.62	14.1	1.6	1	23	464	487	464	487	0.96
17	20	0.018	2.1	12.4	0.6	1	23	493	516	493	516	0.95
18	20	0.0013	0.16	15.9	1.3	1	23	522	545	522	545	0.97
19	20	0.0022	0.25	15.3	1.1	1	23	551	574	551	574	0.96
20	20	7.4	8.6e+02	4.2	0.9	1	16	580	595	580	595	0.91

Sequence Information

Coding Sequence: ATGTACAATGCCGACTTAAGGCGCCACACTAACGAGCATTGCCAGGTGAAAAAGTACATATGTGGAATTTGTCACAGGAGATACAAGGCGAAGAATTCTCTCAAGGTGCACATAAAAACGAAACATCTTGGAGAAAGAAAATATATATGTGCACGGTGTGAATACAAGACAAACTACAAGTCAAATTTACAAGACCACGTAAAAACAAAGCATCTCCACGAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACATACTACAAGTCACATTTACAAAGACACATAAAAGCAAAACATCTTAAAGAAAATGCTTATAAATGCCCAGAGTGTGAATACAAGACAAACTACAAGTCAAATTTACAAATACACATAAAAGCAAAGCATCTTAAAGAAAATGATTATAAATGTACAGAGTGTGAATTCAAGACAAACAGCAAGCCACATTTAAAAATACACATAAATGCAAAACATCTTAAAGAAAATGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAATTTACAAATACACATAAAAGCAAAGCATCTTAAAGAAAATTATTATAAATGCGCAGAGTGTGAATTCAAGACAAATAACAAGGCATATTTACAAGTACACGTGAAAGCAAAACATCTGAAACAACATGATTATAAGTGCATGGAATGTGAATACAAGACAAACTACAAGTCAAATTTACAAGAACACGTAAAAGTAAAGCATCTTAAAGAAATTGATTATAAATGCACAGAGTGTGAATACCAGACATACTACAAGTCACATTTACAAGCACACGTGAAAGCAAAGCATCTTAAAGAAAATTATTATAAATGCGCAGAGTGTCAATTCAAGACAAGCTACAAGTCACATTTACAAGCACACGTGAAAGCAAAACATCTGAAACAACATGATTATAAGTGCAAGGAATGTGAATACAAGACAAACTACAAGTCAAATTTACAAGAACACGTAAAAGTAAAGCATCTTAAAGAAATTGATTATAAATGCACAGAGTGTGAATACAAGACAAGCTACAAGTCACATTTACAAGCACACGTGAAAGCAAAACATCTGAAACAACATGATTATAAGTGCAAGGAATGTGAATACAAGACAAACTACAAGTCAAATTTACAAGAACACGTAAAAGTAAAGCATCTTAAAGAAATTGATTATAAATGCACAGAGTGTGAATACAAGACAAACTACAAGGCAAGTTTACAAACACACATAAAAGTAAAGCATCTTAAAGAAAATGATTATAAATGCACAGACATCTTAAAGAAATTGATTATAAATGCAGAGTGTGAATTCAAGACAAATAACAAGGCATATTTACAAACACACATAAAAGTAAAGCATCTTAAAGAAAATGATTATAAATGCACAGAGTGCGAATTCAAGACAAACTACAAGGCAAGTTTACAAACACACATAAAAGCCAAGCATCTTAAAGAAAATGATTATAAATGCGCAGAGTGTGAATTCAAGACAAATAACAAGGCATATTTACAAGTACACGTGAAAGCAAAACATCTGAAACAACATGATTATAAGTGCGTGGAATGTGAATACAAGACAAACTACAAGTCAAATCTACAAGAACACGTAAAAGTAAAGCATCTTAAAGAAATTGATTATAAATGCACAGAGTGTGAATTCAAGACAAATAACAAGGCATATTTACAAGTACACATAAAAGCAAAGCATCTTACAGAAAATGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTATAAGTCAGCTTTATAA
Protein Sequence: MYNADLRRHTNEHCQVKKYICGICHRRYKAKNSLKVHIKTKHLGERKYICARCEYKTNYKSNLQDHVKTKHLHENDYKCAECEYQTYYKSHLQRHIKAKHLKENAYKCPECEYKTNYKSNLQIHIKAKHLKENDYKCTECEFKTNSKPHLKIHINAKHLKENDYKCTECEFKTNYKSNLQIHIKAKHLKENYYKCAECEFKTNNKAYLQVHVKAKHLKQHDYKCMECEYKTNYKSNLQEHVKVKHLKEIDYKCTECEYQTYYKSHLQAHVKAKHLKENYYKCAECQFKTSYKSHLQAHVKAKHLKQHDYKCKECEYKTNYKSNLQEHVKVKHLKEIDYKCTECEYKTSYKSHLQAHVKAKHLKQHDYKCKECEYKTNYKSNLQEHVKVKHLKEIDYKCTECEYKTNYKASLQTHIKVKHLKENDYKCTDILKKLIINAECEFKTNNKAYLQTHIKVKHLKENDYKCTECEFKTNYKASLQTHIKAKHLKENDYKCAECEFKTNNKAYLQVHVKAKHLKQHDYKCVECEYKTNYKSNLQEHVKVKHLKEIDYKCTECEFKTNNKAYLQVHIKAKHLTENDYKCTECEFKTNYKSAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -