Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000289.1:1048628-1050349[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0022 0.25 15.3 0.8 1 23 2 25 2 25 0.95

2 19 2.8e-05 0.0032 21.2 0.4 1 23 46 69 46 69 0.97

3 19 0.4 47 8.2 0.5 2 23 71 93 70 93 0.94

4 19 3.9e-06 0.00046 23.9 0.8 1 23 99 122 99 122 0.98

5 19 0.064 7.5 10.7 0.4 1 23 128 151 128 151 0.96

6 19 0.027 3.1 11.9 1.5 1 23 157 180 157 180 0.95

7 19 0.0026 0.3 15.0 1.4 1 23 186 209 186 209 0.96

8 19 0.003 0.35 14.8 0.8 1 23 215 238 215 238 0.95

9 19 0.0026 0.3 15.0 1.4 1 23 244 267 244 267 0.96

10 19 0.0074 0.86 13.6 0.9 1 23 273 296 273 296 0.97

11 19 0.0044 0.51 14.3 1.2 1 23 302 325 302 325 0.96

12 19 0.0045 0.53 14.3 1.3 1 23 331 354 331 354 0.97

13 19 0.00053 0.062 17.2 2.2 1 23 360 383 360 383 0.96

14 19 0.0042 0.49 14.4 0.3 1 23 389 412 389 412 0.95

15 19 0.0076 0.89 13.6 0.8 1 23 418 441 418 441 0.96

16 19 0.9 1e+02 7.1 1.3 1 23 447 470 445 470 0.96

17 19 0.03 3.5 11.7 0.6 1 23 476 499 476 499 0.95

18 19 3.4e-05 0.004 21.0 1.8 1 23 505 528 505 528 0.98

19 19 0.0049 0.57 14.2 2.5 1 23 534 557 534 557 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0022	0.25	15.3	0.8	1	23	2	25	2	25	0.95
2	19	2.8e-05	0.0032	21.2	0.4	1	23	46	69	46	69	0.97
3	19	0.4	47	8.2	0.5	2	23	71	93	70	93	0.94
4	19	3.9e-06	0.00046	23.9	0.8	1	23	99	122	99	122	0.98
5	19	0.064	7.5	10.7	0.4	1	23	128	151	128	151	0.96
6	19	0.027	3.1	11.9	1.5	1	23	157	180	157	180	0.95
7	19	0.0026	0.3	15.0	1.4	1	23	186	209	186	209	0.96
8	19	0.003	0.35	14.8	0.8	1	23	215	238	215	238	0.95
9	19	0.0026	0.3	15.0	1.4	1	23	244	267	244	267	0.96
10	19	0.0074	0.86	13.6	0.9	1	23	273	296	273	296	0.97
11	19	0.0044	0.51	14.3	1.2	1	23	302	325	302	325	0.96
12	19	0.0045	0.53	14.3	1.3	1	23	331	354	331	354	0.97
13	19	0.00053	0.062	17.2	2.2	1	23	360	383	360	383	0.96
14	19	0.0042	0.49	14.4	0.3	1	23	389	412	389	412	0.95
15	19	0.0076	0.89	13.6	0.8	1	23	418	441	418	441	0.96
16	19	0.9	1e+02	7.1	1.3	1	23	447	470	445	470	0.96
17	19	0.03	3.5	11.7	0.6	1	23	476	499	476	499	0.95
18	19	3.4e-05	0.004	21.0	1.8	1	23	505	528	505	528	0.98
19	19	0.0049	0.57	14.2	2.5	1	23	534	557	534	557	0.96

Sequence Information

Coding Sequence: ATGTACAAATGTGAAATTTGTCGCAGAAGATACAAGGCGAAGGAATCTCTCAAGGCGCACGTGGTAAAAAATCATGTGTATGATGAAGAAAGAGATATCCAAAAATACGCTACAAAACATCTTAATGAAAATAATTATAAATGCGTGGAGTGTGGATACAAGACAACTCGTAAATCAACTTTAGAAGAACACATCAGAGCAATACATCTGAAATGCACAGAATGTGAATACATAGCAAGTCGCAAGTTACGTTTAAAAGAGCACATAAAAGCAAAACATCTGAAACTAAATGATTATAAATGCGCAGAGTGTGGATACGAGACAAGTCGCAAGGAAAACCTTAAAAGACACATAAAAGTGAGACATCTGAAACAATATGATTTTAAATGCGCAGACTGTGAGTTCAAGACAAACATCAAGGCAAATTTAGAATTACATATAAAAGAAAAACATCTTAAGGAAAATGTATATAAATGCATAGAGTGTGAATACGGGACATGTCGCAAGGTAAACTTAGAAAGACACATAAAAGCAAGGCATCTGAAACAATATGATTATAAATGCGCAGAGTGCGAATTCAAGACAAGCGACAAGTCATATTTAAAGAATCACGTAAAGGCAAAACACCTTAAAGAATATTATTATAAATGCATAGAGTGTAAATACGGGACAAGTCGCAAGGAAAACTTAGAAAGACACATAAAAGCAAGGCATCTGAAACAATATAATTATAAATGCGCAGAGTGCGAATTCAAGACAAGCGACAAGTCATATTTAAAGAATCACGTTAAAGCAAAACACCTTGAAGAATATGATTATAAATGCATAGAGTGTGAATACGGGACAAGTCGCAAGGAATACTTAGAAAGGCATATTAAATCAAGACATCTGAAACAATATAGTTATAAATGCACAGAGTGTGAATTCAAGACAAACGTCAAGTCAAGTTTGAAAGTACATATAAATGATAAACATCTTAAGGAAAATGTATATAAATGCATAGAGTGTGAACACGAGACAAGTCGCAAGGCAAACTTAGAAAGACACATAAAAGTAAGACATCTGAAACAAAAGAATTACAAATGCGCAGAGTGCCAATTCAAGACAAGCGATAAGTCATATTTAAAGAAACACATAAAGGCAAAACACCTTAAAGAACATGATTATAAATGCATAGAGTGTGAATACGGGACAAGTCGCAAGGCAAACTTAGAAAGACACATAAAAGCAAGACATCTCAAACAATTAGATTACAAATGCGCAGAGTGCGAATTCAAGACAAGCGACGAGTCATATTTAAAGAATCACGTAAAAGCAAAACACCTTGAAGAATGTGAGTATAAATGCATAGAGTGTGAATACGGGACAAGTCGCAAGGAAATCTTAGAAAGGCACATCAAATCAAGACATCTAAAACAATATAGTTATAAATGCGCAGAGTGTGAGTTCAAGACAAACGCCAAGTCAAGTTTAAAAGTACATATAAATGATAAACATCTTAAGGAAAATGTATATAAATGCACTGAGTGTGAACACGAGACAAGTCGCAAGGCGAACTTAGAAAAACACATCAGAGTAAGACATCTGAAACAATATGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCGAAAAGTCATATTTAAAGAAACACGTGAAAGCAAAACACCTTCAAGAAAACGATTTTAAATGCACAAGACAAACTACAAGTCAAACTTAG
Protein Sequence: MYKCEICRRRYKAKESLKAHVVKNHVYDEERDIQKYATKHLNENNYKCVECGYKTTRKSTLEEHIRAIHLKCTECEYIASRKLRLKEHIKAKHLKLNDYKCAECGYETSRKENLKRHIKVRHLKQYDFKCADCEFKTNIKANLELHIKEKHLKENVYKCIECEYGTCRKVNLERHIKARHLKQYDYKCAECEFKTSDKSYLKNHVKAKHLKEYYYKCIECKYGTSRKENLERHIKARHLKQYNYKCAECEFKTSDKSYLKNHVKAKHLEEYDYKCIECEYGTSRKEYLERHIKSRHLKQYSYKCTECEFKTNVKSSLKVHINDKHLKENVYKCIECEHETSRKANLERHIKVRHLKQKNYKCAECQFKTSDKSYLKKHIKAKHLKEHDYKCIECEYGTSRKANLERHIKARHLKQLDYKCAECEFKTSDESYLKNHVKAKHLEECEYKCIECEYGTSRKEILERHIKSRHLKQYSYKCAECEFKTNAKSSLKVHINDKHLKENVYKCTECEHETSRKANLEKHIRVRHLKQYDYKCTECEFKTSEKSYLKKHVKAKHLQENDFKCTRQTTSQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00990026;
90% Identity: iTF_00990026;
80% Identity: iTF_00990026;