Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010001720.1:190723-192591[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.2 2.6e+02 5.8 4.5 1 23 13 35 13 35 0.97

2 19 0.00039 0.046 17.6 3.5 1 23 41 64 41 64 0.96

3 19 0.0035 0.4 14.7 4.4 1 23 127 150 127 150 0.98

4 19 0.00044 0.052 17.5 0.9 1 23 156 179 156 179 0.98

5 19 0.019 2.2 12.3 2.6 1 23 185 208 185 208 0.98

6 19 0.045 5.2 11.2 2.7 1 23 214 237 214 237 0.97

7 19 0.037 4.3 11.4 0.2 1 23 243 266 243 266 0.96

8 19 0.0015 0.17 15.8 2.4 1 23 272 295 272 295 0.96

9 19 0.0083 0.97 13.5 1.6 1 23 301 324 301 324 0.96

10 19 0.00024 0.028 18.3 1.8 1 23 330 353 330 353 0.98

11 19 0.00018 0.021 18.7 4.9 1 23 359 382 359 382 0.98

12 19 0.011 1.2 13.1 0.1 1 23 388 411 388 411 0.96

13 19 9.8e-05 0.011 19.5 1.0 1 23 417 440 417 440 0.98

14 19 0.057 6.6 10.8 2.2 1 23 446 469 446 469 0.97

15 19 0.00018 0.021 18.7 4.9 1 23 475 498 475 498 0.98

16 19 0.011 1.2 13.1 0.1 1 23 504 527 504 527 0.96

17 19 0.00036 0.042 17.7 3.7 1 23 533 556 533 556 0.98

18 19 0.0014 0.16 15.9 2.0 1 23 562 585 562 585 0.98

19 19 0.00028 0.033 18.1 0.6 1 23 591 614 591 614 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.2	2.6e+02	5.8	4.5	1	23	13	35	13	35	0.97
2	19	0.00039	0.046	17.6	3.5	1	23	41	64	41	64	0.96
3	19	0.0035	0.4	14.7	4.4	1	23	127	150	127	150	0.98
4	19	0.00044	0.052	17.5	0.9	1	23	156	179	156	179	0.98
5	19	0.019	2.2	12.3	2.6	1	23	185	208	185	208	0.98
6	19	0.045	5.2	11.2	2.7	1	23	214	237	214	237	0.97
7	19	0.037	4.3	11.4	0.2	1	23	243	266	243	266	0.96
8	19	0.0015	0.17	15.8	2.4	1	23	272	295	272	295	0.96
9	19	0.0083	0.97	13.5	1.6	1	23	301	324	301	324	0.96
10	19	0.00024	0.028	18.3	1.8	1	23	330	353	330	353	0.98
11	19	0.00018	0.021	18.7	4.9	1	23	359	382	359	382	0.98
12	19	0.011	1.2	13.1	0.1	1	23	388	411	388	411	0.96
13	19	9.8e-05	0.011	19.5	1.0	1	23	417	440	417	440	0.98
14	19	0.057	6.6	10.8	2.2	1	23	446	469	446	469	0.97
15	19	0.00018	0.021	18.7	4.9	1	23	475	498	475	498	0.98
16	19	0.011	1.2	13.1	0.1	1	23	504	527	504	527	0.96
17	19	0.00036	0.042	17.7	3.7	1	23	533	556	533	556	0.98
18	19	0.0014	0.16	15.9	2.0	1	23	562	585	562	585	0.98
19	19	0.00028	0.033	18.1	0.6	1	23	591	614	591	614	0.97

Sequence Information

Coding Sequence: ATGAGACGCAAGGTCAAGACATGGAAGCGTGGAATGTACAATTGTACCCAATGCAAGTTCACAACAATGTACAACGCCGACTTCAGGCACCACACTAACGAGCATTACGCAGTGAAAAATTTCAAATGTGGAATTTGTCACAGAAGATACAAGACGAAAAAATCTCTCAAGTCGCATGTTGCAAAAATACATATTGACAATGAAGGAAGAGATGTCCAAAAATATCGTGCGTGTGATTATTCCAAAGCTAATATTAAAAATATAAAAGCGAGATCTGCATATTCACATGATGGTACAAAACGAGTTTCAAAGTTTCAAATAAGGGAAAAATATCGCCTAAAATCTGTTACTAAAACAAAACGTTTGATGACAGGCAAATATAAGTGCAAAAATTGCGAGTTTAAGACAAACCACAAGTCAAATTTAGGAAGACACATAAAGGTAAAACATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAAGGCAACTCAAAAGGCATATTTAGAAAATCACATGAAAGTCAAACATCTCAAATTATGGGATTATAAGTGCATGGTGTGTGAATACCAGACGAACTTCAAGTCAAAGTTGCAAATGCACATAAAAACAAAACATCTCAAATTATGGGATTATAAGTGCATGGAGTGTGAATACCAGACGAACATCAAGTCACATTTGAAACAGCACATAGAATCAAAGCATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAGGGCAACTCTCAAGTCAACTTTAGTAGCGCACACGAAAGCGGTACATCTTAAGCTAAAGGATTATAAATGCATGGAATGTGATTACAAGGCAACTCAAACGTCACATTTAAAAGTGCACATGAAAGCGAAACATCTTAAATTAAAGGATTATAAGTGCGTGGAATGTGACTATAAGGCAACTCAAACGTCACATTTAAAAGGTCACATCAAAGCGAAACATCTTAAATTAAAGGATTATAAGTGCGTGGAATGTGACTACAAGGCAGTTCATAAGTCATATTTAGAAGCACACATGAAAACAAAACATCTTAAATTACGCGATTATAAATGCATGGAATGTGACTACAAGGCAACTAAAAAATCACATTTAAACAGACACATGAAAACGAAACATATCAAATTAAGGGATTATAAGTGCATGGAATGTGACTACAAGGCAGCTTCTAAGTCAACTTTAGTAGGACATATGAAAGCGGTACATCTTAAATTAAGGGATTATAAATGCATGGAATGTGACTACAAGGCAGTTCGCAAGTCATATTTAGAAGCACACATGAAAACAAAACATCTTAAATTATATGATTATAAGTGCATGGAGTGTGAATACCAGACGAACATCAAGTCACATTTGAAAGAGCACATAGAATCAAAGCATCTTAAATTACGGGATTATAAATGCATGGAATGTGACTACAAGGCAACTAAAAAATCACATTTAAACAGACACATGAAAACGAAACATATCAAATTAAGGGATTATAAGTGCATGGAATGTGACTACAAGGCAGCTTCTAAGTCAACTTTAGTAGGACATATGAAAGCGGTACATCTTAAATTAAGGGATTATAAATGCATGGAATGTGACTACAAGGCAACTCATAAGTCAAATTTAAAAGGACACATGAAAACGAAACATCTTAAATTAAGGGATTATAAGTGCGTGGAGTGTGAATACCAGACGAGTTTCAAGTCAAATTTGAAATTACACATAAAGTCAAAGCATCTTAAATTACGCGATTATATATGCATGGAATGTGACTACAAGGCAACTCAAAAGTCAAATTTAGTAACACACATGAAAGTGAAACATCTTAAAACGGTTGTCTCACATAGGTGA
Protein Sequence: MRRKVKTWKRGMYNCTQCKFTTMYNADFRHHTNEHYAVKNFKCGICHRRYKTKKSLKSHVAKIHIDNEGRDVQKYRACDYSKANIKNIKARSAYSHDGTKRVSKFQIREKYRLKSVTKTKRLMTGKYKCKNCEFKTNHKSNLGRHIKVKHLKLRDYKCMECDYKATQKAYLENHMKVKHLKLWDYKCMVCEYQTNFKSKLQMHIKTKHLKLWDYKCMECEYQTNIKSHLKQHIESKHLKLRDYKCMECDYRATLKSTLVAHTKAVHLKLKDYKCMECDYKATQTSHLKVHMKAKHLKLKDYKCVECDYKATQTSHLKGHIKAKHLKLKDYKCVECDYKAVHKSYLEAHMKTKHLKLRDYKCMECDYKATKKSHLNRHMKTKHIKLRDYKCMECDYKAASKSTLVGHMKAVHLKLRDYKCMECDYKAVRKSYLEAHMKTKHLKLYDYKCMECEYQTNIKSHLKEHIESKHLKLRDYKCMECDYKATKKSHLNRHMKTKHIKLRDYKCMECDYKAASKSTLVGHMKAVHLKLRDYKCMECDYKATHKSNLKGHMKTKHLKLRDYKCVECEYQTSFKSNLKLHIKSKHLKLRDYICMECDYKATQKSNLVTHMKVKHLKTVVSHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -