Mmel064374.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010000534.1:2068058-2070427[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.5 4e+02 5.2 4.2 1 23 61 83 61 83 0.98
2 25 0.00098 0.11 16.4 1.5 1 23 89 112 89 112 0.98
3 25 0.0011 0.12 16.3 1.4 1 23 118 141 118 141 0.96
4 25 0.0013 0.15 16.0 3.1 1 23 147 170 147 170 0.96
5 25 0.027 3.2 11.8 1.2 1 23 176 199 176 199 0.96
6 25 0.0015 0.17 15.8 4.0 1 23 205 228 205 228 0.98
7 25 0.011 1.3 13.0 3.7 1 23 234 257 234 257 0.98
8 25 0.049 5.7 11.0 1.4 1 23 263 286 263 286 0.96
9 25 0.032 3.7 11.6 0.8 1 23 292 315 292 315 0.96
10 25 0.0021 0.24 15.4 2.6 1 23 321 344 321 344 0.97
11 25 0.0032 0.38 14.7 3.4 1 23 350 373 350 373 0.98
12 25 0.027 3.1 11.9 1.0 1 23 379 402 379 402 0.96
13 25 0.0016 0.18 15.7 1.4 1 23 408 431 408 431 0.96
14 25 0.0013 0.15 16.0 3.2 1 23 437 460 437 460 0.96
15 25 0.0017 0.2 15.6 2.9 1 23 466 489 466 489 0.98
16 25 0.0032 0.38 14.7 3.4 1 23 495 518 495 518 0.98
17 25 0.014 1.6 12.7 1.8 1 23 524 547 524 547 0.97
18 25 0.014 1.7 12.7 1.2 1 23 553 576 553 576 0.95
19 25 0.0041 0.48 14.4 1.8 1 23 582 605 582 605 0.98
20 25 0.0058 0.67 14.0 1.9 1 23 611 634 611 634 0.96
21 25 0.0026 0.3 15.1 3.5 1 23 640 663 640 663 0.98
22 25 0.053 6.2 10.9 0.8 1 23 669 692 669 692 0.92
23 25 0.0014 0.17 15.9 5.1 1 23 698 721 698 721 0.98
24 25 0.022 2.5 12.1 1.4 1 23 727 750 727 750 0.96
25 25 0.0016 0.18 15.7 1.4 1 23 756 779 756 779 0.96

Sequence Information

Coding Sequence
ATGAAGAATATAAATGACCGGCCTTTGATTTTGTTGTTGTTTTTTATAATTTTTTTTAAATTTAATTTGGATTCATTTATTTTCAGATACTGCATACCTCCTGTACTGAAGGCTTACGAGGCTGAAATACCAAATCGTTTATCTTTAAGAAGCAAGGCCGCAAGATGGAAGCGTGGAATATACAAATGTACGCAATGCAAGTTTACCACAATATACGGCGCCGAATTCAGGCACCACACTAACCAGCATTGCCAGGTGAAATTGTACAAATGTGGAATTTGTCACAGGAGATACACGGCGAAGGGATCTCTCAAGGTGCACGTAATAACGAAGCATCTTGGAGAAAGAAATTATAAATGCGCAGAGTGTGAATACAACACAAATCGCAAGTCATACTTGGAAAGACACCTAAAAGGAAAGCATCTTAAAGAAAATGACTATGAATGCAGAGAGTGTGAATACAAGACAAATCACAAGTCAAATTTAAGAAATCACATAAAAGCAAGACATATGAAACAAATTGATTATAAATGCGCAGAGTGTAATTTCAAGACAAATATAAAGTCATATTTAAAGGTACACATAAAAGCAAAACATCGTAAAGGAAATGGTTATAAATGTACAGAGTGTGAATTCAGAACGTATTACAAGTCATATTTAAAGGTGCACATGAAAACAAAACATCGTAAAGGAAATGGTTATAAATGCACAGAGTGTGAATTCAGAACGTATTACAAGTCATATTTAAAGTTGCACATAAAATCAAAACATCTGAAACAAAATAATTATAAATGCGCAGAGTGTAAATTCAAGACAAATTACAAGATTGCTCTAAAAAATCACATAAAAGGAAAACATCTTAAAGTAAATGATTATGAATGCAGAGAGTGTGAATACAAGACAAATTACAAGATAGCTTTAAAAAATCACATAAAAGCGAGACATCTGAAACAAACTGATTATAATTGTACAGAGTGTAAATTCAAGACAAACAACAAATCATATTTAAAGGTACACATAAAAGTAAAACATCGTAAAGGAAATGGTTATAAATGTACAGAGTGTGAATTCAGAACGTATTACAAGTCATATTTAGAAAAACACATAAAATCAAGACATCTGAAACAAAATGATTATAATTGTACAGAGTGTGAATACAAGACAAATTACAAGATAGCTCTAAAAAATCACATAAAAGGAAAACATCTTAAAGTAAATGATTATAATTGTACAGAGTGTGAATACAAGACAAATTACAAGTCAGACTTAGAAAAACACATAAAAGGAAAACATCTTAAAGAAAATGATTATGAATGCAGAGAGTGTGAATACAAGACAAATCACAAGTCAAATTTAAAAAATCACATAAAAGCGAGACATCTGAAACAAAATGATTATAAATGCACAACATGCAAATACAAGACAAGTGTAAAGTCATATTTAAAGGTACACATAAAAATAAAACATCGTAAAGGAAATGGTTATAAATGTACAGAGTGTGAATTCAGAACGTATTACAAGTCATATTTAGAAAAACACATAAAATCAAGACATCTGAAACAAAATGATTATAATTGTACAGAGTGTGAATACAAGACAAATTACAAGATAGCTCTAAAAAATCACATAAAAAGAAAACATCTTAAAGAAAATGATTATAATTGTACAGAGTGTGAATACAAGACAAATTACAAGTCAGACTTTGAAATACACATAAAAGGAAAACATCGTAAAGGAAATGGTTATAAATGTACAGAGTGTGAATACAAGACAAATTACAAGATAGCTTTAAAAAATCACATAAAATCAAGACATCTGAAACAAAATGATTATAATTGTTCAGAGTGTGAATACAAGACAAATTACAAGTCAAACTTTGAAAACCACATAAAAGGAAAACATCTTAAAGAAAATGGTTATAAATGTACAGAGTGTGAATTCAGAACGTATTACAAGTCATATTTAAAGGTGCACATAAAAACAAAACATCTGAAACAAAATAATTATAACTGCGCAGAGTGTGAATTCAAAACGTATTACAAATCAAACTTAAAAGAACACATCGATGCAAAGCATCTTAGAGGAAATGATTATAAGTGCGCAGAGTGTAAATTCAAGACAAGTGTAAAGTCACATTTAAAGAAACACATAAAAACAAAACATCGTAAAGGAAATGGTTATAAATGTACAGAGTGTGAATTCAAGACAAATTACAAGATAGCTCTAAAAAATCACATAAAAGGAAAACATCTTAAAGAAAATGATTATAATTGTACAGAGTGTGAATACAAGACAAATTACAAGTCAGACTTAGAAAAACACATAAAAGGAAAACATCTTAAGGCCAGTTCCCACTTGTGCATTTTTTGA
Protein Sequence
MKNINDRPLILLLFFIIFFKFNLDSFIFRYCIPPVLKAYEAEIPNRLSLRSKAARWKRGIYKCTQCKFTTIYGAEFRHHTNQHCQVKLYKCGICHRRYTAKGSLKVHVITKHLGERNYKCAECEYNTNRKSYLERHLKGKHLKENDYECRECEYKTNHKSNLRNHIKARHMKQIDYKCAECNFKTNIKSYLKVHIKAKHRKGNGYKCTECEFRTYYKSYLKVHMKTKHRKGNGYKCTECEFRTYYKSYLKLHIKSKHLKQNNYKCAECKFKTNYKIALKNHIKGKHLKVNDYECRECEYKTNYKIALKNHIKARHLKQTDYNCTECKFKTNNKSYLKVHIKVKHRKGNGYKCTECEFRTYYKSYLEKHIKSRHLKQNDYNCTECEYKTNYKIALKNHIKGKHLKVNDYNCTECEYKTNYKSDLEKHIKGKHLKENDYECRECEYKTNHKSNLKNHIKARHLKQNDYKCTTCKYKTSVKSYLKVHIKIKHRKGNGYKCTECEFRTYYKSYLEKHIKSRHLKQNDYNCTECEYKTNYKIALKNHIKRKHLKENDYNCTECEYKTNYKSDFEIHIKGKHRKGNGYKCTECEYKTNYKIALKNHIKSRHLKQNDYNCSECEYKTNYKSNFENHIKGKHLKENGYKCTECEFRTYYKSYLKVHIKTKHLKQNNYNCAECEFKTYYKSNLKEHIDAKHLRGNDYKCAECKFKTSVKSHLKKHIKTKHRKGNGYKCTECEFKTNYKIALKNHIKGKHLKENDYNCTECEYKTNYKSDLEKHIKGKHLKASSHLCIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-