Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010004188.1:20409-22097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0022 0.26 15.3 0.6 1 23 36 59 36 59 0.98

2 18 0.0032 0.38 14.7 2.5 1 23 65 88 65 88 0.98

3 18 0.00011 0.013 19.4 0.9 1 23 94 117 94 117 0.98

4 18 0.00058 0.067 17.1 1.2 1 23 123 146 123 146 0.98

5 18 0.0003 0.034 18.0 6.5 1 23 152 175 152 175 0.98

6 18 0.024 2.8 12.0 0.8 1 23 181 204 181 204 0.98

7 18 2.2e-05 0.0026 21.6 1.0 1 23 210 233 210 233 0.98

8 18 1.9e-05 0.0022 21.8 3.6 1 23 239 262 239 262 0.98

9 18 2.6e-05 0.003 21.3 1.1 1 23 268 291 268 291 0.98

10 18 0.0019 0.22 15.5 0.9 1 23 297 320 297 320 0.98

11 18 0.003 0.35 14.8 0.2 1 23 326 349 326 349 0.96

12 18 0.00057 0.066 17.1 2.1 1 23 355 378 355 378 0.98

13 18 0.00043 0.051 17.5 1.4 1 23 384 407 384 407 0.98

14 18 0.00036 0.042 17.8 3.1 1 23 413 436 413 436 0.98

15 18 0.012 1.4 12.9 7.9 1 23 442 465 442 465 0.98

16 18 0.39 46 8.2 0.1 5 21 475 491 474 492 0.93

17 18 2.9e-05 0.0034 21.2 1.2 1 23 500 523 500 523 0.98

18 18 0.0004 0.046 17.6 2.9 1 23 529 552 529 552 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0022	0.26	15.3	0.6	1	23	36	59	36	59	0.98
2	18	0.0032	0.38	14.7	2.5	1	23	65	88	65	88	0.98
3	18	0.00011	0.013	19.4	0.9	1	23	94	117	94	117	0.98
4	18	0.00058	0.067	17.1	1.2	1	23	123	146	123	146	0.98
5	18	0.0003	0.034	18.0	6.5	1	23	152	175	152	175	0.98
6	18	0.024	2.8	12.0	0.8	1	23	181	204	181	204	0.98
7	18	2.2e-05	0.0026	21.6	1.0	1	23	210	233	210	233	0.98
8	18	1.9e-05	0.0022	21.8	3.6	1	23	239	262	239	262	0.98
9	18	2.6e-05	0.003	21.3	1.1	1	23	268	291	268	291	0.98
10	18	0.0019	0.22	15.5	0.9	1	23	297	320	297	320	0.98
11	18	0.003	0.35	14.8	0.2	1	23	326	349	326	349	0.96
12	18	0.00057	0.066	17.1	2.1	1	23	355	378	355	378	0.98
13	18	0.00043	0.051	17.5	1.4	1	23	384	407	384	407	0.98
14	18	0.00036	0.042	17.8	3.1	1	23	413	436	413	436	0.98
15	18	0.012	1.4	12.9	7.9	1	23	442	465	442	465	0.98
16	18	0.39	46	8.2	0.1	5	21	475	491	474	492	0.93
17	18	2.9e-05	0.0034	21.2	1.2	1	23	500	523	500	523	0.98
18	18	0.0004	0.046	17.6	2.9	1	23	529	552	529	552	0.98

Sequence Information

Coding Sequence: ATGAAATTAAATTCGGATTCATTTGTTTTCAGATACAGCGTACCACCTACACCGGAGTTTTACGAACTAGAAGTAAAAAAGCGTTTGTCCCCAAGAAGCAATGATTATAAATGCATGGAGTGTGAATTCAAGACCAATCGTAAGTCACTCTTAGAAGGGCACATGAAGATAATACATCTTAAAGCAAGCGATTATAAATGCGCAAAGTGTGAATACAAGACAAACAGAAAATTATATTTAGAAAAGCACATCAAGACAAATCATCTTAAAGTAACCAATTATAAATGCGCAGAGTGTGAATACAAGACAAACTACAAGTCAAATTTGGAAAGTCACATAAAGACAGTACATCTTAAAGTCACCGATTATAAATGCGCGGAGTGTGAATTCAAGGCAAATCGCAAGTCACACTTAGAAGTACACATAAAGACAGTACATCTTAAAGTAAGCGATTATAAATGCGAAGAGTGTGAATACAAGACAAATCACAAGCAACATTTAAAAAGACACATGAAGACAATACATTTTAAAGTGACCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATTAAGCCGTATTTAAAAATACACATAAAGACAAAACATCTTAAAACAAACGATTATAAATGCGCAGAGTGTGACTACAAGACGAACTACAAGTCAAATTTAGAAAATCACATAAAGACAATACATCTTAAAGTGACCGATTATAAATGCTCAGAGTGTGGATTCAAGACAAACCACAAGCCAAATTTAAAAAGACACATGAAGACAATACATCTTAAAGTGGCCGATTATAAATGCGCAGAGTGCGAATACAAGACAAACCGTAAGTCAAGTTTAGAAAGACACATAAAGACAATACATCTTAAAGTAAGTGATTATAAATGCGCCGAGTGTGAATACAAGACAAACAGAAAGTTATATTTGGAAAATCATATAAAGACAGTACATCTTAAAGTAGCTGATTATGAATGCGCAGAGTGTGAATACAAGACAAACTACAGGTCGAGTTTAGAAAATCATATCAAGGCAGTACATCTTAAAGTGACTGATTATAAATGCGCAGAATGTGAATACAAGACAAACCAAAAGCAACATTTAATAAATCATATAAAGACAATACATCTTAAAGTAGCCGATTATAAATGTGCAGAATGTGAATACCAGACAAATCACAAGCCAAATTTAGAAAAACACATAAAGACAATACATCTTAAAGTAGCCGATTATAAATGCGTAGAGTGTGAATACAAGACAAACCACAAGCGAAATCTAGAAAAACACATAAAGACAATACATCTTAAAGTAACCGATTATAAATGCACAAATTGTGAATACAAGACAAACCATAAGTCATGTTTAAAAACACACATAAAGACAATGCATCTTAAAGTAACCGATTATAAACGCACAGAGTGTGAATACAAGACAAACTACAAGTCAAATTTAGAAAATCACATAAAGCTAATAAATCTTAAGGTGAACGATTATAAATGCGCAGAGTGTGAATACAAGACAAACCGTAAGTCAAGTTTAGAAAATCACATGAAGACAATACATCTTAAAGTAAGCGATTATAAATGCGCAGATTGTGAATTCAAGACATACCATAAGTCAAGCTTAGAAAGACATATAAAGACAATACATCTTAATGTTACCGATTATAAATGCGCAGAGTGA
Protein Sequence: MKLNSDSFVFRYSVPPTPEFYELEVKKRLSPRSNDYKCMECEFKTNRKSLLEGHMKIIHLKASDYKCAKCEYKTNRKLYLEKHIKTNHLKVTNYKCAECEYKTNYKSNLESHIKTVHLKVTDYKCAECEFKANRKSHLEVHIKTVHLKVSDYKCEECEYKTNHKQHLKRHMKTIHFKVTDYKCAECEYKTNIKPYLKIHIKTKHLKTNDYKCAECDYKTNYKSNLENHIKTIHLKVTDYKCSECGFKTNHKPNLKRHMKTIHLKVADYKCAECEYKTNRKSSLERHIKTIHLKVSDYKCAECEYKTNRKLYLENHIKTVHLKVADYECAECEYKTNYRSSLENHIKAVHLKVTDYKCAECEYKTNQKQHLINHIKTIHLKVADYKCAECEYQTNHKPNLEKHIKTIHLKVADYKCVECEYKTNHKRNLEKHIKTIHLKVTDYKCTNCEYKTNHKSCLKTHIKTMHLKVTDYKRTECEYKTNYKSNLENHIKLINLKVNDYKCAECEYKTNRKSSLENHMKTIHLKVSDYKCADCEFKTYHKSSLERHIKTIHLNVTDYKCAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989785;
90% Identity: -
80% Identity: -