Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010003377.1:56809-59259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.56 65 7.7 4.4 1 23 2 24 2 24 0.99

2 26 0.0023 0.26 15.2 0.7 1 23 30 53 30 53 0.96

3 26 0.089 10 10.2 1.9 1 23 120 143 120 143 0.98

4 26 0.71 83 7.4 0.6 5 23 154 173 152 173 0.94

5 26 0.00079 0.092 16.7 1.2 1 23 179 202 179 202 0.98

6 26 0.014 1.7 12.7 1.4 1 23 208 231 208 231 0.98

7 26 0.0037 0.43 14.6 0.7 1 23 237 260 237 260 0.97

8 26 0.00095 0.11 16.4 1.5 1 23 266 289 266 289 0.98

9 26 0.16 18 9.4 1.2 1 23 295 318 295 318 0.97

10 26 0.0073 0.85 13.6 0.6 1 23 324 347 324 347 0.97

11 26 0.00037 0.043 17.7 1.9 1 23 353 376 353 376 0.98

12 26 0.0048 0.56 14.2 1.6 1 23 382 405 382 405 0.97

13 26 0.00075 0.087 16.7 2.8 1 23 411 434 411 434 0.98

14 26 0.00058 0.067 17.1 1.3 1 23 440 463 440 463 0.98

15 26 0.00037 0.043 17.7 1.9 1 23 469 492 469 492 0.98

16 26 0.059 6.9 10.8 1.3 1 23 498 521 498 521 0.97

17 26 0.032 3.8 11.6 1.9 1 23 527 550 527 550 0.97

18 26 0.00037 0.043 17.7 1.9 1 23 556 579 556 579 0.98

19 26 0.0048 0.56 14.2 1.6 1 23 585 608 585 608 0.97

20 26 0.0014 0.17 15.9 1.9 1 23 614 637 614 637 0.98

21 26 0.0053 0.62 14.1 0.6 1 23 643 666 643 666 0.97

22 26 0.0057 0.66 14.0 1.1 1 23 672 695 672 695 0.97

23 26 0.00037 0.043 17.7 1.7 1 23 701 724 701 724 0.98

24 26 0.008 0.93 13.5 1.0 1 23 730 753 730 753 0.97

25 26 0.0037 0.43 14.6 0.7 1 23 759 782 759 782 0.97

26 26 0.012 1.4 13.0 1.9 1 23 788 811 788 811 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.56	65	7.7	4.4	1	23	2	24	2	24	0.99
2	26	0.0023	0.26	15.2	0.7	1	23	30	53	30	53	0.96
3	26	0.089	10	10.2	1.9	1	23	120	143	120	143	0.98
4	26	0.71	83	7.4	0.6	5	23	154	173	152	173	0.94
5	26	0.00079	0.092	16.7	1.2	1	23	179	202	179	202	0.98
6	26	0.014	1.7	12.7	1.4	1	23	208	231	208	231	0.98
7	26	0.0037	0.43	14.6	0.7	1	23	237	260	237	260	0.97
8	26	0.00095	0.11	16.4	1.5	1	23	266	289	266	289	0.98
9	26	0.16	18	9.4	1.2	1	23	295	318	295	318	0.97
10	26	0.0073	0.85	13.6	0.6	1	23	324	347	324	347	0.97
11	26	0.00037	0.043	17.7	1.9	1	23	353	376	353	376	0.98
12	26	0.0048	0.56	14.2	1.6	1	23	382	405	382	405	0.97
13	26	0.00075	0.087	16.7	2.8	1	23	411	434	411	434	0.98
14	26	0.00058	0.067	17.1	1.3	1	23	440	463	440	463	0.98
15	26	0.00037	0.043	17.7	1.9	1	23	469	492	469	492	0.98
16	26	0.059	6.9	10.8	1.3	1	23	498	521	498	521	0.97
17	26	0.032	3.8	11.6	1.9	1	23	527	550	527	550	0.97
18	26	0.00037	0.043	17.7	1.9	1	23	556	579	556	579	0.98
19	26	0.0048	0.56	14.2	1.6	1	23	585	608	585	608	0.97
20	26	0.0014	0.17	15.9	1.9	1	23	614	637	614	637	0.98
21	26	0.0053	0.62	14.1	0.6	1	23	643	666	643	666	0.97
22	26	0.0057	0.66	14.0	1.1	1	23	672	695	672	695	0.97
23	26	0.00037	0.043	17.7	1.7	1	23	701	724	701	724	0.98
24	26	0.008	0.93	13.5	1.0	1	23	730	753	730	753	0.97
25	26	0.0037	0.43	14.6	0.7	1	23	759	782	759	782	0.97
26	26	0.012	1.4	13.0	1.9	1	23	788	811	788	811	0.98

Sequence Information

Coding Sequence: ATGTACAAATGCACGCAATGCAAGTTCAGAACAGTGTACAGGGCCGACTTCAGATACCACACTAACAAGCATTACGAGATGAAAATGTACATATGTGGAATTTGTGACAGAAGATACAAGACGAGGGGATTTCTGAAGATGCACGTAGAAAAAAATCATGCCGAGAATGAAGGCAGAGAGTTCGAAAAATACTCAAAATGTGACTATGTCAAAGCTAATATTAGAAATATAAAAGGAAAATCTCTACATTCACATGATGGTAAAAAACATTGTCAATCCTCGAAATACAAATTTCAAAATAGAGACAAATGTCACTTAAAGTCACTTATAAAAATAAAACATCTGAACAGAGGCAAATATAAGTGCGCAAATTGCGAATTTAAGACATATTACAGAGCATATTTAGAAATGCATATGAAAATGAAACATCTCACGATGGAAGCTGATTATAAATCCATGAAGTGCGAATTCAAGACAAACTACAAGTCAGCCTTGGAAAGACACGTAAAAACAAAACATCTTAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACAAACTTGAAGTCAAACTTAAAACTGCACCTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACTCCAAGTCAAGCTTAGAAGTGCATGTAAAATCAAAACATCTGAAACGAAAAGATTATAAATGCGCAGAGTGTGAATACCAGACATACTCCAAGTCAAACTTAAAAGTGCACGTAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACAAACTTGAAGTCAAACGTAAAACAGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACATGAAGTCAAACTTAGAAGTGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCACAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACTTCAAATCAAACTTAAAAGTGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCACAAAGTGTGAATACCAAACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACATACCGCAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCACAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACAAACTTGAAGTCAAACGTAAAACGGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACACACTCCAAGTCAAGCTTAGAAGTGCATGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCACAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACTTCAAATCAAACTTAAAAGTGCACGTAAAATCAAAACATCTGAAACAAAGTGATTATAAATGCGCAAAGTGTGAATACCAAACAAACTACAAGTCAAACTTAGAACTGCACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACAAACTCCAAGTCAAGCTTAGAAGTGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAATGTGAATACCAGACAAACATGAAGTCAAACTTAAAAGTGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCACAGAATGTGAATACCAGACAAACAACAAGTCAAACTTAGAAATGCACGTAAAAACAAAACATCTGAAACAAAATGATTATAAATGCGCAGTGTGTGAATACCAGACAAACATGAAGTCAAACTTAAAAGTGCACGTAAAATCAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACCAGACAAACTCCAAGTCAAGCTTAGAAGTGCACGTTAAATCAAAACATCTGAAACCAAATGATTACAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTTAAACTTATCAAAGCACATAAAAACAAAACATCTTAAACAAAAGAATTAG
Protein Sequence: MYKCTQCKFRTVYRADFRYHTNKHYEMKMYICGICDRRYKTRGFLKMHVEKNHAENEGREFEKYSKCDYVKANIRNIKGKSLHSHDGKKHCQSSKYKFQNRDKCHLKSLIKIKHLNRGKYKCANCEFKTYYRAYLEMHMKMKHLTMEADYKSMKCEFKTNYKSALERHVKTKHLKQNDYKCAECEYQTNYKSNLELHIKTKHLKQNDYKCAVCEYQTNLKSNLKLHLKSKHLKQNDYKCAECEYQTNSKSSLEVHVKSKHLKRKDYKCAECEYQTYSKSNLKVHVKTKHLKQNDYKCAVCEYQTNLKSNVKQHVKSKHLKQNDYKCAECEYQTNMKSNLEVHVKSKHLKQNDYKCTECEYQTNYKSNLELHIKTKHLKQNDYKCAECEYQTNFKSNLKVHVKSKHLKQNDYKCTKCEYQTNYKSNLELHIKTKHLKQNDYKCAVCEYQTYRKSNLELHIKTKHLKQNDYKCTECEYQTNYKSNLELHIKTKHLKQNDYKCAVCEYQTNLKSNVKRHVKSKHLKQNDYKCAECEYQTHSKSSLEVHVKSKHLKQNDYKCTECEYQTNYKSNLELHIKTKHLKQNDYKCAECEYQTNFKSNLKVHVKSKHLKQSDYKCAKCEYQTNYKSNLELHIKTKHLKQNDYKCAVCEYQTNSKSSLEVHVKSKHLKQNDYKCAECEYQTNMKSNLKVHVKSKHLKQNDYKCTECEYQTNNKSNLEMHVKTKHLKQNDYKCAVCEYQTNMKSNLKVHVKSKHLKQNDYKCAECEYQTNSKSSLEVHVKSKHLKPNDYKCAECEYQTNYKLNLSKHIKTKHLKQKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989856;
90% Identity: -
80% Identity: -