Mmel133252.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010001390.1:126647-128833[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0014 0.16 15.9 1.0 1 23 5 28 5 28 0.96
2 24 6.3 7.3e+02 4.4 6.5 2 21 65 84 64 85 0.93
3 24 0.26 30 8.8 4.9 1 23 93 116 93 116 0.97
4 24 0.00042 0.049 17.5 2.5 1 23 122 145 122 145 0.98
5 24 0.014 1.6 12.8 1.2 1 23 151 174 151 174 0.98
6 24 0.0066 0.76 13.8 2.7 1 23 180 203 180 203 0.98
7 24 0.00021 0.024 18.5 2.3 1 23 209 232 209 232 0.97
8 24 0.0059 0.69 13.9 0.7 1 23 238 261 238 261 0.98
9 24 0.0066 0.76 13.8 2.7 1 23 267 290 267 290 0.98
10 24 0.001 0.12 16.3 0.5 1 23 296 319 296 319 0.98
11 24 4e-05 0.0046 20.8 2.9 1 23 325 348 325 348 0.98
12 24 0.014 1.6 12.8 1.2 1 23 354 377 354 377 0.98
13 24 0.0018 0.21 15.6 3.6 1 23 383 406 383 406 0.98
14 24 0.0018 0.2 15.6 1.1 1 23 412 435 412 435 0.98
15 24 0.0066 0.76 13.8 2.7 1 23 441 464 441 464 0.98
16 24 0.00021 0.024 18.5 2.3 1 23 470 493 470 493 0.97
17 24 0.0059 0.69 13.9 0.7 1 23 499 522 499 522 0.98
18 24 0.0066 0.76 13.8 2.7 1 23 528 551 528 551 0.98
19 24 0.001 0.12 16.3 0.5 1 23 557 580 557 580 0.98
20 24 4e-05 0.0046 20.8 2.9 1 23 586 609 586 609 0.98
21 24 0.014 1.6 12.8 1.2 1 23 615 638 615 638 0.98
22 24 0.0013 0.16 16.0 3.2 1 23 644 667 644 667 0.98
23 24 0.00035 0.041 17.8 0.8 1 23 673 696 673 696 0.98
24 24 0.021 2.4 12.2 0.3 1 23 702 725 702 725 0.96

Sequence Information

Coding Sequence
ATGGTGAAAATGTATAGGTGTGGAATCTGTCACAGAAGATACAAGGCGAAGGCATCTCTCAAGGCGCACGTGGAAAAAATTCACGTTGACAATGAAGATGTCGGGAAACATTCTAGGTGTGACTATTTCAAAGCTAATACTGGGAATATGAAAGAGAGATCTCCACATTCACATGTTGGTGGAAAACAATGTCAATGCTCGAGATGCAATATTCAAACAAAGAAAAAATGTCACTTAAAGTCACATATAAATATAAGACAACTGAACAGAGGAAAATATAAGTGCGCACATTGCGAGTTTAAGACATACTACAGGTCTTATTTAGAAACGCATACGAAAATAAAACATCTCGTGGAAATTTATTATAAATGCAGAGAGTGTGAATTCAAGACAATCTACAAGTCAAATTTAGAAAGACACATAAAAACGAAGCACCTGGAACAAAAGAATTATAAATGCGCAGAATGTGAATACAAGGCACGTAACAGCTCACGTTTAAAAGAACACGTGAAAACGAAACATCTTAAAGAATATAAATATAAATGCGGAGAGTGTGAATATAAAACAAACAAGAAGTATTATTTAGAGTACCACATAAAGACAAAGCATCTTAAAATAAGCGATTATAAATGCCCAGAATGTGAATACAAGACAAACAACAAGTATAACTTTGAGAAACACATAAAACTGAAACATCTGAAACAAAACAATTATAAATGTGCAGAATGTGAATACAAGGCACGCGACAGCACACGTTTAAAAGAACACATGAAAACGATACATCTTAAAGAATATAAATATAAATGCGGAGAGTGTGAATATAAAACAAACAAGAAGTACTATTTAGAGTATCACATAAAGACAAAGCATCTTAAAATAAGCGATTATAAATGCGCGGAATGTGAATACGAAACAAACAGCCAGTATTATTTAGAGGTCCACATAAAGACACAGCATCTTAAAATAAGCGATTATAAATGCCCAGAATGTGAATACAAGACAAACAACAAGTATAATTTTCAGAAACACATAAAAACGAATCATCTGAAGCAAGAGAATTATAAATGTGCAGAATGTGAATACAAGGCACGTAACAGCTCACGTTTAAAAGAACACGTGAAAACGAAACATCTTAATGAATATAATTATAAATGCGGAGAGTGTGAATATAAAACAAACAGGAAGTATTATTTAAAGTATCACATAAAGACAAAGCATCTTAAAATAAGCGATTATAAATGCCCAGAATGTGAATACAAGGCACGTAACAGCTCACGTTTAAAAGAACACGTGAAAACGAAACATCTTAAAGAATATAAATATAAATGCGGAGAGTGTGAATATAAAACAAACAAGAAGTATTATTTAGAGTATCACATAAAGACAAAGCATCTTAAAATAAGCGATTATAAATGCCCAGAATGTGAATACAAGACAAACAACAAGTATAACTTTGAGAAACACATAAAACTGAAACATCTGAAACAAAACAATTATAAATGTGCAGAATGTGAATACAAGGCACGCGACAGCACACGTTTAAAAGAACACATGAAAACGATACATCTTAAAGAATATAAATATAAATGCGGAGAGTGTGAATATAAAACAAACAAGAAGTATTATTTAGAGTATCACATAAAGACAAAGCATCTTAAAATAAGCGATTATAAATGCGCAGAATGTGAATACGAAACAAACAGCCAGTATTATTTAGAGGTCCACATAAAGACACAGCATCTTAAAATAAGCGATTATAAATGCCCAGAATGTGAATACAAGACAAACAACAAGTATAATTTTCAGAAACACATAAAAACGAATCATCTGAAGCAAGAGAATTATAAATGTGCAGAATGTGAATACAAGGCACGTAACAGCTCACGTTTAAAAGAACACGTGAAAACGAAACATCTTAATGAATATAATTATAAATGCGGAGAGTGTGAATATAAAACAAACAGGAAGTATTATTTAAAGTATCACATAAAGACACAGCATCTTAAAATAAACGATTATAAATGCCCAGAATGTGAATACAAGGCAAACAACAAGTATTATTTAGAGATTCACATAAAGACGAAGCATCTTAAAATAAGCGATTATAAATGCGCGGAATGTGAATACAAGACAAACGTCAAATATAATTTAGGAAATCACATAAAGGCAGTACATCGTAAAATATGA
Protein Sequence
MVKMYRCGICHRRYKAKASLKAHVEKIHVDNEDVGKHSRCDYFKANTGNMKERSPHSHVGGKQCQCSRCNIQTKKKCHLKSHINIRQLNRGKYKCAHCEFKTYYRSYLETHTKIKHLVEIYYKCRECEFKTIYKSNLERHIKTKHLEQKNYKCAECEYKARNSSRLKEHVKTKHLKEYKYKCGECEYKTNKKYYLEYHIKTKHLKISDYKCPECEYKTNNKYNFEKHIKLKHLKQNNYKCAECEYKARDSTRLKEHMKTIHLKEYKYKCGECEYKTNKKYYLEYHIKTKHLKISDYKCAECEYETNSQYYLEVHIKTQHLKISDYKCPECEYKTNNKYNFQKHIKTNHLKQENYKCAECEYKARNSSRLKEHVKTKHLNEYNYKCGECEYKTNRKYYLKYHIKTKHLKISDYKCPECEYKARNSSRLKEHVKTKHLKEYKYKCGECEYKTNKKYYLEYHIKTKHLKISDYKCPECEYKTNNKYNFEKHIKLKHLKQNNYKCAECEYKARDSTRLKEHMKTIHLKEYKYKCGECEYKTNKKYYLEYHIKTKHLKISDYKCAECEYETNSQYYLEVHIKTQHLKISDYKCPECEYKTNNKYNFQKHIKTNHLKQENYKCAECEYKARNSSRLKEHVKTKHLNEYNYKCGECEYKTNRKYYLKYHIKTQHLKINDYKCPECEYKANNKYYLEIHIKTKHLKISDYKCAECEYKTNVKYNLGNHIKAVHRKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-