Mmel098995.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010000918.1:312250-323605[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.2 23 9.1 0.4 1 23 39 62 39 62 0.95
2 25 0.0058 0.68 13.9 0.6 1 23 100 123 100 123 0.96
3 25 0.0092 1.1 13.3 1.3 1 23 129 152 129 152 0.96
4 25 0.00093 0.11 16.4 1.5 1 23 158 181 158 181 0.98
5 25 0.0017 0.2 15.6 1.0 1 23 187 210 187 210 0.98
6 25 0.0044 0.51 14.3 1.8 1 23 216 239 216 239 0.98
7 25 0.011 1.3 13.1 0.9 1 23 245 268 245 268 0.96
8 25 0.0036 0.42 14.6 0.5 1 23 274 297 274 297 0.95
9 25 0.00057 0.066 17.1 2.5 1 23 303 326 303 326 0.98
10 25 0.0035 0.41 14.6 0.9 1 23 332 355 332 355 0.97
11 25 0.0056 0.66 14.0 1.7 1 23 361 384 361 384 0.98
12 25 0.0013 0.15 16.0 1.0 1 23 390 413 390 413 0.97
13 25 0.00078 0.091 16.7 1.1 1 23 419 442 419 442 0.98
14 25 0.00028 0.033 18.1 1.5 1 23 448 471 448 471 0.98
15 25 6.3e-05 0.0074 20.1 1.5 1 23 477 500 477 500 0.98
16 25 0.00053 0.061 17.2 2.9 1 23 506 529 506 529 0.97
17 25 0.37 43 8.3 0.3 1 23 817 840 817 840 0.94
18 25 8.3 9.7e+02 4.0 0.2 1 17 846 862 846 863 0.93
19 25 0.072 8.3 10.5 2.9 1 23 875 898 875 898 0.96
20 25 0.00015 0.017 18.9 2.2 1 23 904 927 904 927 0.98
21 25 0.017 2 12.5 0.6 1 23 933 956 933 956 0.96
22 25 0.0017 0.2 15.6 0.9 1 23 962 985 962 985 0.98
23 25 0.2 24 9.1 1.5 1 23 991 1014 991 1014 0.98
24 25 0.00092 0.11 16.5 1.0 1 23 1020 1043 1020 1043 0.98
25 25 0.00022 0.026 18.4 2.6 1 23 1049 1072 1049 1072 0.98

Sequence Information

Coding Sequence
ATGGAGATTATAAATGATCGGAATTTGATCATATACTGCCTACTTCCTACACCGGAAGTTTACCCGATTGAAATACACAGGCGTTCATCTCCGAAAAGCAAGGCAAGACGAAATTATGAATGCGCAGAGTGCGAATTCACAACCAACATCAAATCAAATTTCGAAACGCACGTAAAAGCACAACATCTGAATCAAACTAATTATAATAAATACACAGAGTGTGAATTCCGGACAGGCCACACGAAAAGTTTAAAAAGACGCATAAACACAATAGATCTTAAGGGAATAAAAAGAGATTATAAATGCGTGGAGTGTGAATATGAGACGAAAAAAAGAGCAAATTTAAAAATTCACATAAAAGCAAAACATCTTAATGAAACCGATTATAAATGCGCTGTATGTAAATTCGAGACAAATTACAAGTCAAGTTTAGAAAAACACATAAAAGGAAAACATCTGAAACAAAATGATTATAAATGCGCAGAGTGTGAATACGAGACAAGCCACAAATCATACTTAGAACAACACATTAAAGTAAATCATCTCAAACAAAATGATTATAAATGTATGGAATGTGAATATGAGACGAGTAACAAAAGAAATTTAGAAATTCACGTAAAAACGAAACATCTTAAAGAAAATGATTATAAATGCGCTGAGTGTAAATTCGAGACGAATTACAAGTCATATTTAGAAAAACACATAAAAGTAAAACATCTTAAACAAAATGATTATAAATGCAAGGAGTGTGAATACAAGACAAGTTACAAGGCAAGTTTAGATATACACATAAAAGCAAAACACCTGAAACAAAATGATTATAAATGCATGGAGTGCGAATATGAGACAAGTAATAAAGGAAATTTAAAAATTCACGTGAAAGCAAAACATCTTAAAGAAAATAATTATAAATGCGAAGAGTGTCAATACAAGACAAACTACAAGTCATATTTAGAAAAACACATAAAGGTAAAACACCTGAAGCAAAATGATTATAAATGCATGGTGTGTGAATATGTGACGTATAATAAAGGAAATTTAAAAATTCACGTAAAATCAAAACATCTTAAAGAAAATGATTATAAATGCATGGAGTGTGAATTCAAGACAAACTACAAGGCAAGTTTAGAAAAACACATGAAAGTAAAACATCTGAAACAAAATGATTATAAATGTGCAGAGTGTGAATACGAGACAAGCCACAAATCATACTTAGAAAACCACATTCTAGTAAATCATCTGAAACAAAAGGATTATAAATGCACGGAGTGTGAATATGAGACGAGTAATAAAGGAACTTTAAAAATTCACGTGAAAACAAGACATCTAAAAGAAAATGATTTTAAATGCGCAGACTGTGAATACAAGACAAACTACAAGTCAAATTTAGAAAAGCACATAAAAGTGAAACATCTTAAACAAAATGATTATAAATGCATGGTGTGTGGATATAAGACGAGTAATAAAGGAAATTTAAAAATTCACTTAAAAACGAAACATCTTAAAGAAAATGATTATAAATGTACAAAATGTGAATACAAGACCAATTACAAGTCAAATTTAGAAAGACACATACAACTAAAACATCTGATACAAAAGGTTTATAAACGTACAGATTCTGAACACATGCCAGGTCGCAAAACATATAAGCCGAATCTTATTAAAAATAAACAAGGGAAAATACTAGATGAAGATGAGGACATTATAAAGAGGTGGAAGGAGTATTTCGAAGAACTCTTAACGATAGAAAAGAACAATGACATAGGAACTAAAGAAGAACAAGAGAATATTAACGAAAATAACGAACAAGACGTAGAGATAACAATAGAAGAATGCACACGTGGAAGTATATCTACTCGGGTTTTTCCCATAATACATAGGAACGACGGTTTACCACTGGCCTACTCGTCAGGTGATAAGTGGAGTGATATTTTGAATCAGTTTGAACTAGCCTTTGATAGTGTCAACATGGATTCTAGTaaaagaaagcgTGCAGAGTGCGATATAGAAGATAATATACCATTAGCATTTTTATTTCCCAATTTTAACATCACTAATTTAGATTTAAGCACATACGCATTAATTGATAATGAGTTATTTACTGAAAATCCTAATGTTTCCATTATAGATTGTATCGATGAAATTACTGATATCAGTGATGAAATGGAAAATGAGATTGAAGAGGAATTTGTTACTAGTATATCAAATATTTCAGAAGCCCATCAAAAATTAAAAGATCTTGAGAACTATTTCTTAAGCACTAACAGTTTTAACATTGCTAACAATATTTCTCAAGCTCTTCTTGAATGTGAATCTGAGATATTTAAACATAAAATGAAAAAAGCAAGACAAACAACAATTAATGAATACTACCTACTTCCTACACCGGAAGTTTACCAGATTGAAATAGAAAAGCGTTCATCTCTGAAAAGCAAGACAAGAAGAAATTATGAATGTTCTGAGTGTGAATTCACAACAAACATCAAATCAAAATTACAAGGTCACATAGAAGCAAAACATCTAAAACTAAATAATTATAAATGCATGGAGTGTGAATATGAGACGAATAATAAAGGAACTTTAAAAGTTCGCGTAAAGACAAAGCATCTTAAAGAAAATAAGTATAAATGCGCCGAGTGTGAATTCCAGACAAATTACAAGTCGTGTTTAGAAAGGCACATAAAAGCAAAACATCTTAAACAAAATGATTATAAATGTACAGAGTGTAAATACAATACAAGCCGCAAATCATACTTAGAACAACACATTAAAGTAAATCATCTGAAACAAAACGATTATAAATGTACCGAATGTGAATACAAAGCAAATTACAAGGCAAGTTTAGAAACACACATCAAAGCAAAACATCTCAAACAAAATGATTATAAATGCATGGAGTGTGAATATGAGACGAATAATAAAGGAAATTTAAAAATTCACGTAAAAACAAGACATCTTAAAGAAAGAGATTATAAATGCGCAGAGTGTAAATTCGAGACAAGTTACAAGTTACGTTTAGAAAAACACATAAAAGTAAAACATCTGAAACAAAATGATTATAAATGCACCGAGTGTGAATATGAGACGAATAATAAAGGAAATTTAAAAATTCACGTAAAATCAAAACATCTCAAGCAAAATGATTATAAATGTACAAAGTGTGAATACAAGACCAATTACAAGTCAAATTTAGAAAGACACATACAAGTAAAACATCTATAG
Protein Sequence
MEIINDRNLIIYCLLPTPEVYPIEIHRRSSPKSKARRNYECAECEFTTNIKSNFETHVKAQHLNQTNYNKYTECEFRTGHTKSLKRRINTIDLKGIKRDYKCVECEYETKKRANLKIHIKAKHLNETDYKCAVCKFETNYKSSLEKHIKGKHLKQNDYKCAECEYETSHKSYLEQHIKVNHLKQNDYKCMECEYETSNKRNLEIHVKTKHLKENDYKCAECKFETNYKSYLEKHIKVKHLKQNDYKCKECEYKTSYKASLDIHIKAKHLKQNDYKCMECEYETSNKGNLKIHVKAKHLKENNYKCEECQYKTNYKSYLEKHIKVKHLKQNDYKCMVCEYVTYNKGNLKIHVKSKHLKENDYKCMECEFKTNYKASLEKHMKVKHLKQNDYKCAECEYETSHKSYLENHILVNHLKQKDYKCTECEYETSNKGTLKIHVKTRHLKENDFKCADCEYKTNYKSNLEKHIKVKHLKQNDYKCMVCGYKTSNKGNLKIHLKTKHLKENDYKCTKCEYKTNYKSNLERHIQLKHLIQKVYKRTDSEHMPGRKTYKPNLIKNKQGKILDEDEDIIKRWKEYFEELLTIEKNNDIGTKEEQENINENNEQDVEITIEECTRGSISTRVFPIIHRNDGLPLAYSSGDKWSDILNQFELAFDSVNMDSSKRKRAECDIEDNIPLAFLFPNFNITNLDLSTYALIDNELFTENPNVSIIDCIDEITDISDEMENEIEEEFVTSISNISEAHQKLKDLENYFLSTNSFNIANNISQALLECESEIFKHKMKKARQTTINEYYLLPTPEVYQIEIEKRSSLKSKTRRNYECSECEFTTNIKSKLQGHIEAKHLKLNNYKCMECEYETNNKGTLKVRVKTKHLKENKYKCAECEFQTNYKSCLERHIKAKHLKQNDYKCTECKYNTSRKSYLEQHIKVNHLKQNDYKCTECEYKANYKASLETHIKAKHLKQNDYKCMECEYETNNKGNLKIHVKTRHLKERDYKCAECKFETSYKLRLEKHIKVKHLKQNDYKCTECEYETNNKGNLKIHVKSKHLKQNDYKCTKCEYKTNYKSNLERHIQVKHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-