Mmel064157.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010000534.1:887942-895991[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.001 0.12 16.3 2.7 1 23 201 224 201 224 0.96
2 27 0.077 9 10.4 4.3 1 23 291 314 291 314 0.97
3 27 0.00026 0.03 18.2 0.8 1 23 349 372 349 372 0.98
4 27 0.00023 0.026 18.4 4.2 1 23 378 401 378 401 0.98
5 27 0.0002 0.024 18.5 1.0 1 23 407 430 407 430 0.98
6 27 0.0036 0.42 14.6 1.0 1 23 436 459 436 459 0.98
7 27 0.00025 0.029 18.3 0.4 1 23 465 488 465 488 0.98
8 27 0.0016 0.18 15.7 2.0 1 23 494 517 494 517 0.98
9 27 0.0002 0.024 18.5 1.0 1 23 523 546 523 546 0.98
10 27 0.26 30 8.7 0.3 1 19 552 570 552 570 0.99
11 27 0.038 4.4 11.4 0.3 5 23 570 589 569 589 0.96
12 27 0.0036 0.42 14.6 1.0 1 23 595 618 595 618 0.98
13 27 0.0002 0.024 18.5 1.0 1 23 624 647 624 647 0.98
14 27 0.0036 0.42 14.6 1.0 1 23 653 676 653 676 0.98
15 27 0.0002 0.024 18.5 1.0 1 23 682 705 682 705 0.98
16 27 0.0036 0.42 14.6 1.0 1 23 711 734 711 734 0.98
17 27 0.0002 0.024 18.5 1.0 1 23 740 763 740 763 0.98
18 27 0.26 30 8.7 0.3 1 19 769 787 769 787 0.99
19 27 0.038 4.4 11.4 0.3 5 23 787 806 786 806 0.96
20 27 0.0036 0.42 14.6 1.0 1 23 812 835 812 835 0.98
21 27 0.0002 0.024 18.5 1.0 1 23 841 864 841 864 0.98
22 27 0.26 30 8.7 0.3 1 19 870 888 870 888 0.99
23 27 0.038 4.4 11.4 0.3 5 23 888 907 887 907 0.96
24 27 0.34 40 8.4 0.6 1 19 913 931 913 931 0.99
25 27 0.038 4.4 11.4 0.3 5 23 931 950 930 950 0.96
26 27 0.0063 0.74 13.8 1.7 1 23 956 979 956 979 0.98
27 27 1.3 1.5e+02 6.6 0.6 1 18 985 1002 985 1002 0.95

Sequence Information

Coding Sequence
ATGGCTGAACGGTTAACTATGCAAGAGCGAGCTGAATTAATTCTTATTTGCGGAGATAACTACAAAACATGTAGAGACGCAGCTGATATTTTTAATGAAAGACAACCCAACAAATTTATTAGTTTCCAAAGCGTCTCAAGAATTTTAAATCAGTTTAAAGCAACTGGTAGTTTAGAAATGCGTTTCAAAAAAAGTAGGGAAAAGCAAGTGAGACATTTCGAAAATTCTTTACGTGTTATGCAAAGTGTAATTGAAAATCCCAAAATTTCTGTCAGAAAAATTGCAAGCAATTTGGATATTAAAAAATCATCAGTAAGCAACATTTTGGTTAACAATAGATATCACCCCTATAAGCCAAGATATATTCAAACTTTGCAGGAACGGGACTACAACAATATATTTGAATTTTCTTTGGATATTCAAGTCTGCGCACATCCCTCGGTGGAGATTCGCGAGCTACAGGTAGAAAAGTGTTCACCTAATAAACACAAAGCCAAAAGACGGAAGCGTGGAAGATACAAATGTAAGCAATGCAAGTTTAGAACAATGTACAACGCCGACTTCAGGCACCACACTTACGAGCATTACCAGGCAAAAATGCACAAGTGTAGAATTTGTCGGAGAAGATACAAGACGAACGAATCTCTGAAGGCGCACATTAAAGAAATTCATGCTGGCAATGAAGGAAGAGATTTCCAAAAATACTCTGCGTGTGACGACTTTAAAGCCAACATTAAAAATATTAAAGAAAGATCTTCACACTCACATGATACTGAAAAACAGTGCCAATCCTCGAAATGCAAGATTCAAACAAGGAGTAAATGTCGCTTAAAATCTCATATTAAAATAAAACAACTCAAGAAAGGCAAATATAAGTGCACAAAATGCGAGTCTAAGACATATTACAGGACTTATTTAGAAAGGCACATGAAAATGAAACATCTCGTGGAAAGTAATTATGAATGCATGGAGCGTCAATACCAGAGGAACTTCAAGTCAAGTTTTGAGGTACACATAAAGACAAATCATCTGAAACAAAAGATTTATAAATGCCCAGAGTGCGAATTCAGGACAAACAACAGGTCTTATTTGCAAACACACATCAAAATAATACACCTTAAAATAAGCGATTACAAATGTCCGAAGTGTGAATACAAGACAAATAATAAGTCACATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTGAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAGTAAGTCAGATTTAGAAAAGCACATAAAAATAATACACCTTAAAATAAGCGATTACAAATGTCCAGAGTGTGAATACAAGACAAATAATAAGTACCGTTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAGAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACTGTGAATACAAAACAAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAAAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACTGTGAATACAAAACGAACAATAAGTCAGATTTAGAAAAGCACATAAAAAGATTACATCTTAAAGTAGGCGATTATAAATGCGCAAAGTGTGAATACAAGACAAATATCAAGTCGAATTTAAAAGCACACGTAAAAACGAAACATCTTAAAGAACACGATTATAAATGCGCAGAGTGTGAATACAAAACAAACAGTAAGTCAGATTTAGAAAAGAACATAAAAAGATTACATCTTAAAATAGGCGATTATAATTGTGCAGATGTGAAAATTAAAGTTGCAATGGATTGTGTTGAAATTATTGAGAGTGCAAGGGGAAATCCGCAAGTTCTCTATCAAGGATTTAAATATTGTTTGAAGAGGACTAACAAAAATTTTACCAAAAACTGGAGATGTGTAAATAGCAATTCAAAGTTAGAATGCAGCGGCAGAATTACAACGAACAATGAAAATAAGGTTATCCGCACCAGTCAACACAATTGTTTAGTAATACCTAACGTTGCATATACCGATGTTGAGAAGTGCAAATCAATTTGTAGAAAACGTGCCAGACAGGAAATGACATGCATACCAAAAGTGTATGAAGAAGAATTTCATCAAATTAAAGATAGTGGATTGGAATTTGTTACAAAAATGCCAGCATATGAGTCTGTAAAATCATCCTTGTACCGACACAGAAATAAAGCTCTAGGGGTACCTGCGTTACCAAAAACTAGAGCAGAATTTATAGTTCCCGATTATATAAATAAAACTGAAGATGGAGAGAATTTCACAATTTTTGATCAAGGTACGACAGATCGAATTATCGGCTTTGGAAGTAAGCTGGGTATACAGGGATTATCgatTGACCACAATATATCCCCAAAAAAGCGTGCTGCAAAATATATTCAAATGGATAGGAGGATAAATGGAATAGTGTCGCAAATACAAGAAAGTCAAGATGTAGAGCAAGCACTTCCCAAATTAGCAAGTTTAATTAATTTTTAA
Protein Sequence
MAERLTMQERAELILICGDNYKTCRDAADIFNERQPNKFISFQSVSRILNQFKATGSLEMRFKKSREKQVRHFENSLRVMQSVIENPKISVRKIASNLDIKKSSVSNILVNNRYHPYKPRYIQTLQERDYNNIFEFSLDIQVCAHPSVEIRELQVEKCSPNKHKAKRRKRGRYKCKQCKFRTMYNADFRHHTYEHYQAKMHKCRICRRRYKTNESLKAHIKEIHAGNEGRDFQKYSACDDFKANIKNIKERSSHSHDTEKQCQSSKCKIQTRSKCRLKSHIKIKQLKKGKYKCTKCESKTYYRTYLERHMKMKHLVESNYECMERQYQRNFKSSFEVHIKTNHLKQKIYKCPECEFRTNNRSYLQTHIKIIHLKISDYKCPKCEYKTNNKSHLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNSKSDLEKHIKIIHLKISDYKCPECEYKTNNKYRLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHCEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHCEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNNKSDLEKHIKRLHLKVGDYKCAECEYKTNIKSNLKAHCEYKTNNKSDLEKHIKRLHLKVGDYKCAKCEYKTNIKSNLKAHCEYKTNNKSDLEKHIKRLHLKVGDYKCAKCEYKTNIKSNLKAHVKTKHLKEHDYKCAECEYKTNSKSDLEKNIKRLHLKIGDYNCADVKIKVAMDCVEIIESARGNPQVLYQGFKYCLKRTNKNFTKNWRCVNSNSKLECSGRITTNNENKVIRTSQHNCLVIPNVAYTDVEKCKSICRKRARQEMTCIPKVYEEEFHQIKDSGLEFVTKMPAYESVKSSLYRHRNKALGVPALPKTRAEFIVPDYINKTEDGENFTIFDQGTTDRIIGFGSKLGIQGLSIDHNISPKKRAAKYIQMDRRINGIVSQIQESQDVEQALPKLASLINF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-