Mmel074666.2
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000622.1:236638-239757[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.11 12 10.0 2.0 1 23 2 25 2 25 0.97 2 34 0.011 1.3 13.1 1.0 1 23 87 110 87 110 0.98 3 34 0.0031 0.36 14.8 1.2 1 23 116 139 116 139 0.98 4 34 0.014 1.6 12.8 1.4 1 23 145 168 145 168 0.98 5 34 0.00045 0.053 17.4 1.3 1 23 174 197 174 197 0.98 6 34 0.023 2.6 12.1 2.1 2 23 204 226 203 226 0.95 7 34 0.01 1.2 13.2 0.4 1 23 232 255 232 255 0.98 8 34 0.0048 0.56 14.2 0.7 2 23 262 284 261 284 0.95 9 34 0.0012 0.14 16.1 3.1 2 23 291 313 290 313 0.97 10 34 0.0023 0.27 15.2 0.8 1 23 319 342 319 342 0.98 11 34 0.0069 0.8 13.7 0.8 1 23 348 371 348 371 0.97 12 34 0.00086 0.1 16.6 0.5 1 23 377 400 377 400 0.98 13 34 0.023 2.6 12.1 2.1 2 23 407 429 406 429 0.95 14 34 0.0013 0.16 15.9 0.7 1 23 435 458 435 458 0.98 15 34 0.005 0.58 14.2 1.8 2 23 465 487 464 487 0.96 16 34 0.0012 0.14 16.1 3.1 2 23 494 516 493 516 0.97 17 34 0.0023 0.27 15.2 0.8 1 23 522 545 522 545 0.98 18 34 0.0023 0.27 15.2 0.8 1 23 551 574 551 574 0.98 19 34 0.0023 0.27 15.2 0.8 1 23 580 603 580 603 0.98 20 34 0.0069 0.8 13.7 0.8 1 23 609 632 609 632 0.97 21 34 0.0069 0.8 13.7 0.8 1 23 638 661 638 661 0.97 22 34 0.00086 0.1 16.6 0.5 1 23 667 690 667 690 0.98 23 34 0.023 2.6 12.1 2.1 2 23 697 719 696 719 0.95 24 34 0.0013 0.16 15.9 0.7 1 23 725 748 725 748 0.98 25 34 0.005 0.58 14.2 1.8 2 23 755 777 754 777 0.96 26 34 0.0012 0.14 16.1 3.1 2 23 784 806 783 806 0.97 27 34 0.0023 0.27 15.2 0.8 1 23 812 835 812 835 0.98 28 34 0.0069 0.8 13.7 0.8 1 23 841 864 841 864 0.97 29 34 0.0023 0.27 15.2 0.8 1 23 870 893 870 893 0.98 30 34 0.0023 0.27 15.2 0.8 1 23 899 922 899 922 0.98 31 34 0.0069 0.8 13.7 0.8 1 23 928 951 928 951 0.97 32 34 0.0069 0.8 13.7 0.8 1 23 957 980 957 980 0.97 33 34 0.078 9.1 10.4 0.9 1 23 986 1009 986 1009 0.95 34 34 0.00086 0.1 16.6 0.5 1 23 1015 1038 1015 1038 0.96
Sequence Information
- Coding Sequence
- ATGTACAAATGTGGAATTTGTCGCCGAGGGCACAAAACGAGAGAATCTCTGAAGATGCACATGGAAAAAATTCATCCCGGCAATGAAAGTAGAGATATCGGAAAACACTATATCAAAGCTAATGTTAAAAATCTAAAAGAAGGATCTCCACATTTACACGATTGTGAAGAACAATGTAAATGCTTGAAATGCAAATTTCGCACAAGAGACAAATGTCACTTAACATCACTAAAAATAAAACATCTGAAACAAAAGAATTATAAATGCGCAAACTGTGAATACAAGGCAAACAACAAGTCAGTCTTAGAGAAACATATAAAAACGAAACATCTGAAACAAAAGAATTTTAAATGCGCAGAGTGTGAATACCAGACAAACTATAAGTCACTTCTACAAATTCACATAAAAACAAAACATATGAAACAAAAGGATTATAAATGCGCAGAGTGTGAATATAAGGCAAGCATGAAGTCAAATTTATATGTGCACAGAAAGACAAAACATCTGAAACAAACGGATTTTAAATGCACAGATTGTGAATTCAAGACAAGCTACAAATCGGGCCTAGAAAACCACATAAAAACTGAACATCTGAAACAAAAAGATTTAAAATGCTCAAAGTGTGAATATCAGACAAACTACAAGTCATCTTTAAAAACACACATCAAAGCAAAACATCTGAAAGAAAATGATTATAAATGTGGAGAGTGTGAATACAAGACGGCCTGGAAGTCAAACTTAGAAGTGCACATAAAAACAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCGGACTAACAACAAGTCATATTTACAAGTACACATAAAATTAAAACATCTGAAACAAAGGGATTTAAAATGTGCAGAGTGTGAATACCGGACTAACAACAAGTCACATTTACAACAACACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGTGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAAGGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAGCTACAAATCGGGCCTAGAAAATCACATAAAAACTGAACATCTGAAACAAAAAGATTTAAAATGCTCAAAGTGTGAATATCAGACAAACTACAAGTCATCTTTAAAAACACACATCAAAGCAAAACATCTGAAAGAAAATGATTATAAATGTGGACAGTGTGAATACAAGACGGCCTCGAAGTCAAACTTAGGAGTGCACATAAAAACAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCACATTTACAAGAACACATAAAATCACAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCGGACTAACAACAAGTCACATTTACAACAACACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGTGCAGAGTGCGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAGTACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAAGGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAAGGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAGCTACAAATCGGGCCTAGAAAATCACATAAAAACTGAACATCTGAAACAAAAAGATTTAAAATGCTCAAAGTGTGAATATCAGACAAACTACAAGTCATCTTTAAAAACACACATCAAAGCAAAACATCTGAAAGAAAATGATTATAAATGTGGACAGTGTGAATACAAGACGGCCTCGAAGTCAAACTTAGGAGTGCACATAAAAACAAAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCAGACAAACAACAAGTCACATTTACAAGAACACATAAAATCACAACATCTGAAACAAAAGGATTTAAAATGCGCAGAGTGTGAATACCGGACTAACAACAAGTCACATTTACAACAACACATAAAAACAAAACATCTGAAACAAAATGATTATAAATGTGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAACTTAGAAGCGCACGTAAAATCAAAGCATCTCAATGAAAAGGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCAAGCTTAGAAGCGCACGTAAAATCAAAGCATCTCAAAGAAAATGACTATAAATGCGCAGAGTGTGAATACCAGACAAACTACAAGTCATCTTTAAAAGGACACGTCAAAGCAAAACATCTGAAAGAAAATGATTATGAATGCGCAGGGTGTGACTTTAAGACAAGCAATAAGTCATATTTGCAAGTACACATAAAAGCAAAACATCTGTAA
- Protein Sequence
- MYKCGICRRGHKTRESLKMHMEKIHPGNESRDIGKHYIKANVKNLKEGSPHLHDCEEQCKCLKCKFRTRDKCHLTSLKIKHLKQKNYKCANCEYKANNKSVLEKHIKTKHLKQKNFKCAECEYQTNYKSLLQIHIKTKHMKQKDYKCAECEYKASMKSNLYVHRKTKHLKQTDFKCTDCEFKTSYKSGLENHIKTEHLKQKDLKCSKCEYQTNYKSSLKTHIKAKHLKENDYKCGECEYKTAWKSNLEVHIKTKHLKQKDLKCAECEYRTNNKSYLQVHIKLKHLKQRDLKCAECEYRTNNKSHLQQHIKTKHLKQNDYKCAECEYQTNYKSNLEAHVKSKHLKEKDYKCAECEYQTNYKSSLEAHVKSKHLKENDYKCAECEYQTSYKSGLENHIKTEHLKQKDLKCSKCEYQTNYKSSLKTHIKAKHLKENDYKCGQCEYKTASKSNLGVHIKTKHLKQKDLKCAECEYQTNNKSHLQEHIKSQHLKQKDLKCAECEYRTNNKSHLQQHIKTKHLKQNDYKCAECEYQTNYKSNLEAHVKSKHLKENDYKCAECEYQTNYKSNLEAHVKSKHLKENDYKCAECEYQTNYKSNLEAHVKSKHLKEKDYKCAECEYQTNYKSSLEAHVKSKHLKEKDYKCAECEYQTNYKSSLEAHVKSKHLKENDYKCAECEYQTSYKSGLENHIKTEHLKQKDLKCSKCEYQTNYKSSLKTHIKAKHLKENDYKCGQCEYKTASKSNLGVHIKTKHLKQKDLKCAECEYQTNNKSHLQEHIKSQHLKQKDLKCAECEYRTNNKSHLQQHIKTKHLKQNDYKCAECEYQTNYKSNLEAHVKSKHLKENDYKCAECEYQTNYKSSLEAHVKSKHLKENDYKCAECEYQTNYKSNLEAHVKSKHLKENDYKCAECEYQTNYKSNLEAHVKSKHLNEKDYKCAECEYQTNYKSSLEAHVKSKHLKENDYKCAECEYQTNYKSSLEAHVKSKHLKENDYKCAECEYQTNYKSSLKGHVKAKHLKENDYECAGCDFKTSNKSYLQVHIKAKHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -