Mmel065555.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000542.1:1592521-1598604[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 44 5.7 6.7e+02 4.5 5.3 1 23 69 91 69 91 0.98 2 44 0.052 6 11.0 1.8 1 23 97 120 97 120 0.96 3 44 0.58 67 7.7 1.7 1 23 188 211 188 211 0.96 4 44 0.0072 0.84 13.6 0.7 1 23 217 240 217 240 0.96 5 44 0.0042 0.49 14.4 1.0 1 23 246 269 246 269 0.96 6 44 0.0052 0.61 14.1 0.9 1 23 275 298 275 298 0.96 7 44 0.0063 0.73 13.8 0.2 1 23 304 327 304 327 0.96 8 44 0.0023 0.27 15.2 0.2 1 23 333 356 333 356 0.96 9 44 0.0023 0.27 15.2 0.2 1 23 362 385 362 385 0.96 10 44 0.0045 0.52 14.3 2.5 1 23 391 414 391 414 0.96 11 44 0.0023 0.27 15.2 2.6 1 23 420 443 420 443 0.96 12 44 0.00013 0.015 19.2 0.3 1 23 449 472 449 472 0.96 13 44 0.0023 0.27 15.2 0.2 1 23 478 501 478 501 0.96 14 44 0.00057 0.067 17.1 0.3 1 23 507 530 507 530 0.96 15 44 0.0074 0.86 13.6 0.4 1 23 536 559 536 559 0.96 16 44 0.0023 0.27 15.2 0.2 1 23 565 588 565 588 0.96 17 44 0.0023 0.27 15.2 0.2 1 23 594 617 594 617 0.96 18 44 0.0023 0.27 15.2 0.2 1 23 623 646 623 646 0.96 19 44 0.0023 0.27 15.2 0.2 1 23 652 675 652 675 0.96 20 44 0.0004 0.046 17.6 0.4 1 23 681 704 681 704 0.96 21 44 0.35 41 8.4 0.4 1 23 710 733 710 733 0.96 22 44 0.016 1.9 12.5 1.6 1 23 739 762 739 762 0.96 23 44 0.00026 0.03 18.2 0.6 1 23 766 789 766 789 0.96 24 44 0.022 2.5 12.1 0.1 1 23 795 818 795 818 0.96 25 44 0.00015 0.018 18.9 0.8 1 23 853 876 853 876 0.98 26 44 0.00033 0.038 17.9 1.0 1 23 882 905 882 905 0.98 27 44 0.0021 0.25 15.3 0.5 1 23 978 1001 978 1001 0.96 28 44 0.029 3.4 11.7 2.4 1 23 1007 1030 1007 1030 0.98 29 44 2.5 3e+02 5.6 1.2 1 18 1036 1053 1036 1059 0.94 30 44 0.00012 0.014 19.2 0.9 1 23 1094 1117 1094 1117 0.98 31 44 0.00012 0.014 19.2 0.9 1 23 1123 1146 1123 1146 0.98 32 44 0.029 3.4 11.7 2.4 1 23 1152 1175 1152 1175 0.98 33 44 1.7 2e+02 6.1 0.7 1 18 1181 1198 1181 1204 0.94 34 44 0.05 5.8 11.0 0.8 5 23 1214 1233 1212 1233 0.96 35 44 0.27 31 8.7 1.1 2 23 1256 1278 1255 1278 0.97 36 44 0.00028 0.033 18.1 1.1 1 23 1284 1307 1284 1307 0.98 37 44 0.0027 0.31 15.0 0.4 1 23 1313 1336 1313 1336 0.98 38 44 0.0021 0.25 15.3 0.5 1 23 1420 1443 1420 1443 0.96 39 44 0.049 5.7 11.0 0.1 1 23 1449 1472 1449 1472 0.96 40 44 4.1 4.8e+02 5.0 1.0 1 18 1490 1507 1490 1513 0.94 41 44 0.00012 0.014 19.2 0.9 1 23 1548 1571 1548 1571 0.98 42 44 0.00012 0.014 19.2 0.9 1 23 1577 1600 1577 1600 0.98 43 44 0.011 1.3 13.0 3.4 1 23 1606 1629 1606 1629 0.98 44 44 0.96 1.1e+02 7.0 0.3 1 17 1670 1686 1670 1687 0.94
Sequence Information
- Coding Sequence
- ATGCATATAAAGTTTTTTTTTTATATATTAGTTGCAGTTGGAATAAAAAGAACGTTTGATCATGTTATTGTAGTGAAAGGATTTTTAATTAATTTGGATTCATTTGTTTTCAGATACAGCGTACCTCCTGCACCGGAGTTTCACGAATTAGAAGTAAAGCGTTCCTCCCTACGAAGCAAGGTTAAAAGATGGACGCGTAGAATGTACAAATGTACGCAATGCAAGTTCAGAACAATGTACAACGCCGACTTTAGGCACCACACTAACGAGCATTACGAGGTGAAAATGTACAAATGTGGATTTTGTCGCAGAAGATACAAGGCGAGGAAATCTCTTGAGACGCACATGGTAAAAATTCATGGTGGCATTGCAGGAAGAGATGTACAAAAATACTTTACGTGTGACTCTTTCAAAGCTACTATTAAAAATATTAAGGAGAAGTCTCGACACTCACAACATCGTGGTGGCAAGCATTGTCAATGCGCGAAATGCAAGCTTGAAACAGGGGACAAATGCTCCCTAAGACTACTTGTAAAAGTAAAACGTCTAAAAAGAAGCAAATATAAGTGCGCAAATTGTGAGTTTAAGACATATTACAGCATTTATTTAAAAACGCATATGGAAATAAAACATCTCACGGAATGTAATTATAAATGCATGGTGTGTGAATTCGAGACAAGTTTCAAGTCGGATTTAAAAAGACACATAAAAGCAATACACCTGAAACAAACGATTTATAAATGCGTGGAGTGTGAATTCACGACAAATTTCAAGTCAAATTTAAAAAGTCACATAAAAGCAATTCATCCGAATCAAAAGATTTATAAATGCGTGGAGTGTGAATTCAAGACAAGTCGCAAGTCGGTTTTAAAAAGACACATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTTACAAGTCAAATTTAGAAAATCACATAAAGGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACATAAAAGGAATACATCTGAAACAAAAGGACTATAAATGCAAGGAGTGTGAATTCAAGACAAATTTCAGGTCAAATTTAGAAAAACACATTAAAGCAAAACATCTAAAAGTAAGTGATTATAAATGCATGGAGTGCGAATACGAGACAAGTTACAAGTCAAATTTAGAACATCACATGAAGGCAAAACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGGATACGAGACAAGTTACAAGTCAAATTTAGAAAAACACATAAATGCAATACATCTAAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACATAAAAGGAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGATTACGAGACAAGTTACAATTCAAATTTAGAAAATCACATAAAAGCAATACATCTAAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACACAAAAGGAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAGAAACACATAAAAGGAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAGAAACACATAAAAGGAATACATTTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACATAAAAGGAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCAAGTCAGACTTAGAAAAACACATAAAAGGAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGATTACGAGACAAGTTACAAGTCAAATTTAGAAAATCACATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATTCCAGACAAATATCAAGTCAAGTTTAGAAAGTCACATAAAAGGAATACATCTGAAACAAAAGGACTATAAATGCAAGGAGTGTGAATTTAAGACAAATTTCAGGCCAAATTTAGAAAGACACATTAAAGCAAAACATATAAAAGATTATAAATGCAAAGAGTGCGAATACGAGACAAGTTACAAGTCAAATTTAGAAAATCACATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTCGCATGTCAGACTTAGAAAAACACATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATTTAAGACAAATTTCAGGCCAAATTTAGAAAGACAGATTAAAGCAAAACATCTAAACGTAAGTGATTATAAATGCACGGAGTGCGAATACGAGACAAGTTACAAGTCAAACTTAGAAATGCACATAAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGAAGTGCGAATACGAGACAAGTAACAAGTCAAACTTAGAAATGCACATAAAAACAATACATCTGAAACAAAAGAATTATAAATGCAAGGAGTGTGAACTCAAGACAAATTTCAGGCCAAATTTAGAAAGACGCATTAAAGCAACACATCTAAAAAAAGACATAAAAACAATACATCTGAAGCAAAAGGATCATAAATGCAAGGAGTGTGAAATCAAGACAAATTGTAAGTCAAATTTAGAAGGAGACAAAAAAGCAATGCATCTGAAACAAAAGGATTATAAATGCGTGGAGTGCAAATACGAGACAAGTTACAAGTCAAACTTAGAAATGCACATAAAAGCAATACATTTGAAACAAACGGAGTATAAATGCATGGAGTGCGAATACGAGGCAAGATACAAGTCATGCTTAAAAAAACACATAAAAGTAATACATCTGAAACAAAAGGATTATAAATGTAAGGAGTGTGAATTCAAGACAAATTTCAGGTCAAATTTAGAAAGACAAATTAAAACAAATCATATAAAAGTAAGTGATTATAAAAGCATGGAGTGCGAATACGAGACAAGTCGCAAGTCAGTCTTAGAAGGACACATAAAAGGGATACATCTGAAACATAAGGATTATAAATGCATGGAGTGCGAATACGAGACAAGTTACAAGTCAAACTTAGAAAGACACATAAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGACAAGTTACAAGTCAAACTTAGAAAGACACATTAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGATACAAGTCATGCTTAAAAAAACACATAAAAGTAATACATCTGAAACAAAAGGATTATAAATGTAAGGAGTGTGAACTCAAGACAAATTTCAGGTCAAATTTAGAAAGACAAATTAAAACAAATCATATAAAAGTAAGTGATTATAAAAGCATGGAGTGCGAATACGAGACAAGTCGCAAGTCACACTTAGAAAGTCATATAAAGACACGACATCTAAAACAAAAGGATTATAAATGCAAGGAGTGTGAATTCAAGACAAATTTCAGTAAGTTTATAAATAAATGCATGGAATGCGAATACGATGCAAGTCGCAAGTTACACTTAGAAAGTCATATAAAAACAATACATCAGAAACAAAAGGATTATAAATGCAAAGAGTGCGAATACGAGACAAATTACAAGTCAAATTTAGAAAATCACATAAAATCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGGCAAGTTACAAGTCAAACTTAGAAATGCACATAAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGAGTGCGAATACGAGACAAAATTATAAATGCAAGGAGTGTGAACTCAAGACAAATTTCAGGCCAAATTTAGAAAGACGCATTAAAGCAACACATCTAAAAAAAGACATAAAAACAATACATCTGAAGCAAAAGGATCATAAATGCAAGGAGTGTGAAATCAAGACAAATTGTAAGTCAAATTTAGAAGGAGACAAAAAAGCAATGCATCTGAAACAAAAGGATTATAAATGCGTGGAGTGCAAATACGAGACAAGTTACAAGTCAAACTTAGAAATGCACATAAAAGCAATACATTTGAAACAAACGGACTATAAATGCATGGAGTGCGAATACGAGGCAAGGCGCAAGTCAGACTTAGAAGGACACATACAAGCGATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATTCAAGACAAATGACTATAAATGCCAGGAGTGTGAATTCAAGACAAATTTTAGGTCAAATTTAGAAAGACAAATTAAAACAAATCATATAAAAGTAAGTGATTATAAAAGCATGGAGTGCGAATACGAGACAAGTCGCAAGTCAGTCTTAGAAGGACACATAAAAGGGATACATCTGAAACATAAGGATTATAAATGCATGGAGTGCGAATACGAGACAAGTTACAAGTCAAACTTAGAAAGACACATAAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGACAAGTTACAAGTCAAACTTAGAAAGACACATTAAAACAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGCGAATACGAGACAAGATACAAGTCATGCTTAAAAAAACACATAAAAGTAATACATCTGAAACAAAAGGATTATAAATGTAAGGAGTGTGATTCAAGACAAAATGGAGTGCGAATACGAGACAAATTACAAGCCGTCCTTAGAAAGACAAAAACAATACATCTGAAGCAAAAGGATCATAAATGCAAGGAGTGTGAAATCAAGACAAGTTACAAGTCAAACTTAGAAATGCAAATAAAAGCAATACATCTGAAACAAAAGGATTATAAATGCATGGAGTGTGAATTCAAGACAAATATCAAGTCAATGCGAATACGAGGCAAGTCTCCCAAGTCAGACTTAGAAGGACACATAAAAGCGAAACATCTGAAACAAAAGGATTATAAATTCATGGAGTGTGAATTCAAGACCAATATCAAGTCAAGTTTAGAAAGTCATATAAAAGGAATACATCTGAAACAAAAGGACTATAAATGCATGGAGTACGAATACGAGACAACTTAA
- Protein Sequence
- MHIKFFFYILVAVGIKRTFDHVIVVKGFLINLDSFVFRYSVPPAPEFHELEVKRSSLRSKVKRWTRRMYKCTQCKFRTMYNADFRHHTNEHYEVKMYKCGFCRRRYKARKSLETHMVKIHGGIAGRDVQKYFTCDSFKATIKNIKEKSRHSQHRGGKHCQCAKCKLETGDKCSLRLLVKVKRLKRSKYKCANCEFKTYYSIYLKTHMEIKHLTECNYKCMVCEFETSFKSDLKRHIKAIHLKQTIYKCVECEFTTNFKSNLKSHIKAIHPNQKIYKCVECEFKTSRKSVLKRHIKAIHLKQKDYKCMECEYEASYKSNLENHIKAIHLKQKDYKCMECEYEASRKSDLEKHIKAIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCKECEFKTNFRSNLEKHIKAKHLKVSDYKCMECEYETSYKSNLEHHMKAKHLKQKDYKCMECGYETSYKSNLEKHINAIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCMECDYETSYNSNLENHIKAIHLKQKDYKCMECEYEASRKSDLEKHTKGIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCMECEYEASRKSDLEKHIKGIHLKQKDYKCMECDYETSYKSNLENHIKAIHLKQKDYKCMECEFQTNIKSSLESHIKGIHLKQKDYKCKECEFKTNFRPNLERHIKAKHIKDYKCKECEYETSYKSNLENHIKAIHLKQKDYKCMECEYEASRMSDLEKHIKAIHLKQKDYKCMECEFKTNFRPNLERQIKAKHLNVSDYKCTECEYETSYKSNLEMHIKTIHLKQKDYKCMKCEYETSNKSNLEMHIKTIHLKQKNYKCKECELKTNFRPNLERRIKATHLKKDIKTIHLKQKDHKCKECEIKTNCKSNLEGDKKAMHLKQKDYKCVECKYETSYKSNLEMHIKAIHLKQTEYKCMECEYEARYKSCLKKHIKVIHLKQKDYKCKECEFKTNFRSNLERQIKTNHIKVSDYKSMECEYETSRKSVLEGHIKGIHLKHKDYKCMECEYETSYKSNLERHIKTIHLKQKDYKCMECEYETSYKSNLERHIKTIHLKQKDYKCMECEYEARYKSCLKKHIKVIHLKQKDYKCKECELKTNFRSNLERQIKTNHIKVSDYKSMECEYETSRKSHLESHIKTRHLKQKDYKCKECEFKTNFSKFINKCMECEYDASRKLHLESHIKTIHQKQKDYKCKECEYETNYKSNLENHIKSIHLKQKDYKCMECEYEASYKSNLEMHIKTIHLKQKDYKCMSANTRQNYKCKECELKTNFRPNLERRIKATHLKKDIKTIHLKQKDHKCKECEIKTNCKSNLEGDKKAMHLKQKDYKCVECKYETSYKSNLEMHIKAIHLKQTDYKCMECEYEARRKSDLEGHIQAIHLKQKDYKCMECEFKTNDYKCQECEFKTNFRSNLERQIKTNHIKVSDYKSMECEYETSRKSVLEGHIKGIHLKHKDYKCMECEYETSYKSNLERHIKTIHLKQKDYKCMECEYETSYKSNLERHIKTIHLKQKDYKCMECEYETRYKSCLKKHIKVIHLKQKDYKCKECDSRQNGVRIRDKLQAVLRKTKTIHLKQKDHKCKECEIKTSYKSNLEMQIKAIHLKQKDYKCMECEFKTNIKSMRIRGKSPKSDLEGHIKAKHLKQKDYKFMECEFKTNIKSSLESHIKGIHLKQKDYKCMEYEYETT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -