Mmel065480.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010000542.1:1205742-1210193[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 48 0.83 96 7.2 2.4 1 23 45 67 45 67 0.98
2 48 0.0015 0.18 15.8 0.3 1 23 73 96 73 96 0.96
3 48 0.6 69 7.6 6.2 1 23 163 186 163 186 0.97
4 48 0.0022 0.25 15.3 1.5 1 23 192 215 192 215 0.98
5 48 0.0018 0.21 15.5 1.5 1 23 221 244 221 244 0.98
6 48 0.0056 0.65 14.0 0.9 1 23 250 273 250 273 0.98
7 48 0.00022 0.025 18.4 1.4 1 23 279 302 279 302 0.98
8 48 0.0037 0.43 14.6 2.9 1 23 308 331 308 331 0.98
9 48 0.00095 0.11 16.4 1.6 1 23 337 360 337 360 0.98
10 48 0.0045 0.53 14.3 3.0 1 23 366 389 366 389 0.98
11 48 0.00086 0.1 16.6 1.8 1 23 395 418 395 418 0.98
12 48 0.0056 0.65 14.0 0.9 1 23 424 447 424 447 0.98
13 48 0.00022 0.025 18.4 1.4 1 23 453 476 453 476 0.98
14 48 0.0036 0.42 14.6 2.5 1 23 482 505 482 505 0.98
15 48 0.00086 0.1 16.6 1.8 1 23 511 534 511 534 0.98
16 48 0.0056 0.65 14.0 0.9 1 23 540 563 540 563 0.98
17 48 0.00022 0.025 18.4 1.4 1 23 569 592 569 592 0.98
18 48 0.01 1.2 13.2 3.0 1 23 598 621 598 621 0.98
19 48 0.031 3.6 11.7 1.7 1 23 627 649 627 649 0.97
20 48 0.0045 0.53 14.3 3.0 1 23 655 678 655 678 0.98
21 48 0.00086 0.1 16.6 1.8 1 23 684 707 684 707 0.98
22 48 0.0056 0.65 14.0 0.9 1 23 713 736 713 736 0.98
23 48 0.00022 0.025 18.4 1.4 1 23 742 765 742 765 0.98
24 48 0.0094 1.1 13.3 2.9 1 23 771 794 771 794 0.98
25 48 0.00086 0.1 16.6 1.8 1 23 800 823 800 823 0.98
26 48 0.0056 0.65 14.0 0.9 1 23 829 852 829 852 0.98
27 48 0.00022 0.025 18.4 1.4 1 23 858 881 858 881 0.98
28 48 0.01 1.2 13.2 3.0 1 23 887 910 887 910 0.98
29 48 0.031 3.6 11.7 1.7 1 23 916 938 916 938 0.97
30 48 0.0045 0.53 14.3 3.0 1 23 944 967 944 967 0.98
31 48 0.00086 0.1 16.6 1.8 1 23 973 996 973 996 0.98
32 48 0.0056 0.65 14.0 2.6 1 23 1002 1025 1002 1025 0.98
33 48 0.031 3.6 11.7 1.7 1 23 1031 1053 1031 1053 0.97
34 48 0.0045 0.53 14.3 3.0 1 23 1059 1082 1059 1082 0.98
35 48 0.00086 0.1 16.6 1.8 1 23 1088 1111 1088 1111 0.98
36 48 0.0056 0.65 14.0 0.9 1 23 1117 1140 1117 1140 0.98
37 48 0.00022 0.025 18.4 1.4 1 23 1146 1169 1146 1169 0.98
38 48 0.01 1.2 13.2 3.0 1 23 1175 1198 1175 1198 0.98
39 48 0.031 3.6 11.7 1.7 1 23 1204 1226 1204 1226 0.97
40 48 0.0045 0.53 14.3 3.0 1 23 1232 1255 1232 1255 0.98
41 48 0.00086 0.1 16.6 1.8 1 23 1261 1284 1261 1284 0.98
42 48 0.0056 0.65 14.0 0.9 1 23 1290 1313 1290 1313 0.98
43 48 0.00022 0.025 18.4 1.4 1 23 1319 1342 1319 1342 0.98
44 48 0.01 1.2 13.2 3.0 1 23 1348 1371 1348 1371 0.98
45 48 0.00086 0.1 16.6 1.8 1 23 1377 1400 1377 1400 0.98
46 48 0.0056 0.65 14.0 2.6 1 23 1406 1429 1406 1429 0.98
47 48 0.00089 0.1 16.5 2.1 1 23 1435 1458 1435 1458 0.98
48 48 0.15 17 9.5 0.7 1 20 1464 1483 1464 1483 0.97

Sequence Information

Coding Sequence
ATGTATTCGAAATTTAATTGGGACTCGTTTGTTTTCAGATGCAGCATACCTCCTACACCAGAGTCTCATAAGCTTGATGTAAAGAAGCGCTCATCTCTCAGAAGCAATGTCAAAAGACGGAAGCGTAGAATATACAAATGTACGCAATGCAAGTTCGCAACAATGTACAACACCGACTTCAGTAACCACATTAACCAGCATTGCGGGGCGAAAATGTACAAATGTGGAATTTGTGACAGAAGATACAAGGCGAAAGCATCTCTTAAGGTGCACGTCGAAAAAGTTCATTTTAACAATGAAGGAAGAGAGATCCAAAACTACTCAACGTGTGACTATTCCAAAGCCAATATTAAAAATATAAAATATAGATCTGTACAGTTACATAAAGGTGGCAAACAGTCTGAATTCTCGAAATTCGAGTTTCAACCAAGGGACAAATGTTCCTTAAAATCACTTATAAAAATAAAGCGTCTGAATAAAGGCAAATATAAGTGTACAAATTGCGAATTTAAAACATATTACAGGACCTGTTTAGAAAAACACATGAAAATAAAACATCTTATTGAAAGTAATTATAAATGCACGGAGTGCGAATACGAGACAAATCGCAAGTTACTTTTGGAACGGCACATAAAAACAAAGCATATTAAAGAACATGATTATAAATGCGCAGAATGTGAATTCAAGACAAACCGCAAATCAAGCTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTACAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATACAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGGGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTCCAAGTCAAAGTTGGAACAACACATAAAGTCAAGACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAGACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAACACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAAGCGGGTTTAAAAGATCACATAAAAACGGTACATCTTAAAGAAAGGCGTTATAGATGTGCAGACTGTGAATACAAGACCAACCGCAAATCGAACTTGGAATTACACATAAAGACAAAACATCTTAAAGTAACCGATTATAAATGCACAGAGTGTGAATTCAAGACAAACTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACAACAAGTCGAATTTGGAACTACACGTAAAGTCAAAACATCTTAAAGAACAGGATTATAAATGCACAGAGTGTGAATTCAACACAAGCTACAAGTCAAAGTTGGAACAACACATAAAGTCAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAACTACAAGTCAAATTTAGAACTACACATAAAGTCAAAACATCTTAAAGAACACAATTATAAATGCGCAAAGTGTGAATTCAAGACAAACTACAAGTCAAATTTGGAATTACACATATAG
Protein Sequence
MYSKFNWDSFVFRCSIPPTPESHKLDVKKRSSLRSNVKRRKRRIYKCTQCKFATMYNTDFSNHINQHCGAKMYKCGICDRRYKAKASLKVHVEKVHFNNEGREIQNYSTCDYSKANIKNIKYRSVQLHKGGKQSEFSKFEFQPRDKCSLKSLIKIKRLNKGKYKCTNCEFKTYYRTCLEKHMKIKHLIESNYKCTECEYETNRKLLLERHIKTKHIKEHDYKCAECEFKTNRKSSLELHIKTKHLKVTDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEYKTNYKSKLEQHIKSKHLKEHDYKCTGCEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNSKSKLEQHIKSRHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNYKSKLEQHIKSKHLKEHDYKCTECEYKTNKSNLELHVKSKHLKEQDYKCTECEFKTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNYKSKLEQHIKSRHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNYKSKLEQHIKSKHLKEHDYKCTECEYKTNKSNLELHVKSKHLKEQDYKCTECEFKTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFNTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNKSNLELHVKSKHLKEQDYKCTECEFKTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNYKSKLEQHIKSKHLKEHDYKCTECEYKTNKSNLELHVKSKHLKEQDYKCTECEFKTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFKTNYKAGLKDHIKTVHLKERRYRCADCEYKTNRKSNLELHIKTKHLKVTDYKCTECEFKTNYKSKLEQHIKSKHLKEHDYKCTECEYKTNNKSNLELHVKSKHLKEQDYKCTECEFNTSYKSKLEQHIKSKHLKEHDYKCTECEYKTNYKSNLELHIKSKHLKEHNYKCAKCEFKTNYKSNLELHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-