Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000622.1:1243807-1245321[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.29 1.3e+02 6.2 0.6 13 44 7 35 3 35 0.86

2 17 0.41 1.8e+02 5.7 0.2 17 44 40 64 36 64 0.88

3 17 2.2 1e+03 3.3 0.2 17 44 69 93 65 93 0.88

4 17 0.11 47 7.6 1.0 13 44 94 122 91 122 0.91

5 17 0.41 1.8e+02 5.7 0.2 17 44 127 151 123 151 0.88

6 17 0.41 1.8e+02 5.7 0.2 17 44 156 180 152 180 0.88

7 17 6.6 3e+03 1.8 0.6 17 44 185 209 181 209 0.83

8 17 0.31 1.4e+02 6.1 0.7 13 44 210 238 206 238 0.86

9 17 0.42 1.9e+02 5.6 0.2 17 44 243 267 239 267 0.88

10 17 0.73 3.3e+02 4.9 0.2 17 44 272 296 268 296 0.88

11 17 2.2 1e+03 3.3 0.2 17 44 301 325 297 325 0.88

12 17 0.11 47 7.6 1.0 13 44 326 354 323 354 0.91

13 17 0.41 1.8e+02 5.7 0.2 17 44 359 383 355 383 0.88

14 17 0.3 1.4e+02 6.1 0.1 17 44 388 412 384 412 0.88

15 17 0.41 1.8e+02 5.7 0.2 17 44 417 441 413 441 0.88

16 17 0.3 1.4e+02 6.1 0.1 17 44 446 470 442 470 0.88

17 17 0.56 2.5e+02 5.3 0.2 18 44 476 499 471 499 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.29	1.3e+02	6.2	0.6	13	44	7	35	3	35	0.86
2	17	0.41	1.8e+02	5.7	0.2	17	44	40	64	36	64	0.88
3	17	2.2	1e+03	3.3	0.2	17	44	69	93	65	93	0.88
4	17	0.11	47	7.6	1.0	13	44	94	122	91	122	0.91
5	17	0.41	1.8e+02	5.7	0.2	17	44	127	151	123	151	0.88
6	17	0.41	1.8e+02	5.7	0.2	17	44	156	180	152	180	0.88
7	17	6.6	3e+03	1.8	0.6	17	44	185	209	181	209	0.83
8	17	0.31	1.4e+02	6.1	0.7	13	44	210	238	206	238	0.86
9	17	0.42	1.9e+02	5.6	0.2	17	44	243	267	239	267	0.88
10	17	0.73	3.3e+02	4.9	0.2	17	44	272	296	268	296	0.88
11	17	2.2	1e+03	3.3	0.2	17	44	301	325	297	325	0.88
12	17	0.11	47	7.6	1.0	13	44	326	354	323	354	0.91
13	17	0.41	1.8e+02	5.7	0.2	17	44	359	383	355	383	0.88
14	17	0.3	1.4e+02	6.1	0.1	17	44	388	412	384	412	0.88
15	17	0.41	1.8e+02	5.7	0.2	17	44	417	441	413	441	0.88
16	17	0.3	1.4e+02	6.1	0.1	17	44	446	470	442	470	0.88
17	17	0.56	2.5e+02	5.3	0.2	18	44	476	499	471	499	0.85

Sequence Information

Coding Sequence: ATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAGCAAAACATCCGAAACAAAAGAATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAATCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGCATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATGTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGGATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAGCAAAACATCCGAAACAAAAGAATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACACATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAGGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATTAA
Protein Sequence: METKHPKQKDYKCAQCEFQTNFKSNLEIHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMEAKHPKQKNYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKHYKCAQCEFQTNFKSNVEIHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMETKHPKQKDYKCAQCEFQTNFKSNLGLHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMEAKHPKQKNYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFRSNLEVHMETKHPKQKDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989622;
90% Identity: iTF_00990548;
80% Identity: iTF_00990149;