Mmel074893.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000622.1:1236235-1238445[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.3 1.4e+02 6.1 0.5 13 44 7 35 3 35 0.86 2 24 1 4.7e+02 4.4 0.1 18 44 41 64 37 64 0.86 3 24 0.66 3e+02 5.0 0.2 17 44 69 93 65 93 0.88 4 24 0.64 2.9e+02 5.1 0.2 17 44 98 122 94 122 0.88 5 24 0.64 2.9e+02 5.1 0.2 17 44 127 151 123 151 0.88 6 24 0.64 2.9e+02 5.1 0.2 17 44 156 180 152 180 0.88 7 24 1 4.6e+02 4.4 1.1 17 44 185 209 181 209 0.88 8 24 0.47 2.1e+02 5.5 0.1 17 44 214 238 210 238 0.88 9 24 0.64 2.9e+02 5.1 0.2 17 44 243 267 239 267 0.88 10 24 0.68 3.1e+02 5.0 1.3 13 44 297 325 290 325 0.87 11 24 0.66 3e+02 5.0 0.2 17 44 330 354 326 354 0.88 12 24 0.64 2.9e+02 5.1 0.2 17 44 359 383 355 383 0.88 13 24 3.5 1.6e+03 2.7 0.2 17 44 388 412 384 412 0.88 14 24 0.12 53 7.4 0.7 11 44 412 441 409 441 0.90 15 24 0.64 2.9e+02 5.1 0.2 17 44 446 470 442 470 0.88 16 24 0.47 2.1e+02 5.5 0.1 17 44 475 499 471 499 0.88 17 24 0.64 2.9e+02 5.1 0.2 17 44 504 528 500 528 0.88 18 24 0.58 2.6e+02 5.2 0.3 17 44 533 557 529 557 0.88 19 24 0.47 2.1e+02 5.5 0.1 17 44 562 586 558 586 0.88 20 24 0.47 2.1e+02 5.5 0.1 17 44 591 615 587 615 0.88 21 24 0.64 2.9e+02 5.1 0.2 17 44 620 644 616 644 0.88 22 24 0.58 2.6e+02 5.2 0.3 17 44 649 673 645 673 0.88 23 24 0.47 2.1e+02 5.5 0.1 17 44 678 702 674 702 0.88 24 24 1 4.7e+02 4.4 0.1 18 44 708 731 704 731 0.86
Sequence Information
- Coding Sequence
- ATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGATACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAGGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGCATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATGTAGAAATACATATTGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAATACATATGGAAGCAAAACATCCGAAACAAAAGAATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAATTATTATAAATGCGCACAGTGTGAATTTCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAATGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAATTATTATAAATGCGCACAGTGTGAATTTCAGACAAACTTTAAGTCAAATTTAGAATTACATATGGAAACAAAACATCCGAAACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAAGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGATACAAAAGGATTATAAATGCGCACAGTGTGAATTCCAGACAAACTTTAGGTCAAATTTAGAAGTACATATGGAAACAAAACATCCGAAACAAAAGGATTATTAA
- Protein Sequence
- METKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPIQKDYKCAQCEFQTNFRSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKHYKCAQCEFQTNFKSNLEIHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNVEIHIETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEIHMEAKHPKQKNYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQNYYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPKQKDYKCAQCEFQTNFKSNLELHMETKHPKQNYYKCAQCEFQTNFKSNLELHMETKHPKQKDYKCAQCEFQTNFKSNLEVHMETKHPIQKDYKCAQCEFQTNFRSNLEVHMETKHPKQKDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00989822;
- 90% Identity
- iTF_00989822;
- 80% Identity
- iTF_00989822;