Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010003468.1:129026-132449[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.1e-07 0.00019 24.5 0.1 11 41 207 237 202 240 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.1e-07	0.00019	24.5	0.1	11	41	207	237	202	240	0.87

Sequence Information

Coding Sequence: ATGGATTCAGTTACTATTAGTGAAGCAAGTGGTTTATTGAAACATTTGAATTGCCCGGAAGTTCTCTACTGGTTGAAAATATTTTATTTCATCATGCCACATGTTCAAATATTTAAACAATCTCAAATGCGCGGGATTAACAGTGTTCAAATGCAAAAGACAATTGAACAATTCCAACAGCAAATTATTCACATTATAAATTTAAGAAATTCTACTGACAATGACAATCAAGAACGCAATAATGAAGAACCTGCAAGGAAAAGACAAAAAACGACAGGTGGAGATAACAGAGCTGCTATTGCAAAGAAAGTATGTGACACTATTTTAAGCCAAATTAGCGACCGATTTGATTTTAGGAATTACTTAAGTACAGCAAAATTATTTGATTCTCAAAATTTTAAAACTTATAGTCATTCATTTTCACAAAAAAATGTTGAGGAAACTGTGAAATCTTATCCTATGTTGGACAGGGTAAAATTGAAAAGTGAACTTTCAGTAATTTATGAGCGCGATGACATGTGCGACGTAGGTGGTGTTTTGCCACTTTTAGTGTTCATAACAGACAACAACCTAAAAAAAGGTTTTGACGGAAACATACAAACTGAGAACTTAGAAAAAGCCATCGCAGATGGAAAGCTGAGTATACGCGCAGCGGCAGAAATATATTCCGTGTCAAAATCTACAATACACAGAAAATATCATGGTGAAAATAGTAGGAGGTACGGGGGACAAACAGTATTTTCCGCAAAAGACGAAATGCACATAGCAAACGGCCTCTTACTAGCTGCTGAATGGGGTTTCCCTTTCACACATATGGACTTGCGACATATTGTGAAACGATTTCTAGATCGAAAAGGTGTGAATATAAAAATTTTTAATAATAATTTGCCTGGTCGTATATGGCTAAAGAGCTTTCTTAATCAACACAAGGGACTGTTATCTAATCGTTTGTCAGAAAATATAAAAAGAGCTCGTGCCATAGTATCTGCTGAAACCATTAATTCATATTTCAATAATATGGAGGTCACATTAGCAAACGTGCCTCCAGATAACATCATTAACTTTGATGAAACCAATATATCCGATGACCCTGGACAACAAACTGTCCTAGTCAGAAAGGAGGCAAAGCATTCAGAAAGAATTATTGATGCAACTAAGAGTcaTACATCAGTCATGTTTTCTATTGCTGGCGATGGAACATTATTACCTTTACACATTGTCTACAAATCAAAACATGTTCACGATGCATGGACTGATAATGGGCCAGAGGGGGCCATATATGATAGCGGTAAAAGTGGATGGTTTGATGGATTTCTATTTGAGAGATGGTTCACAAAGGTTGCTTTAGAGTATTTACGACGACGTGATGGTGAAAAGATTATAATTGGTGACAACCTTGCCAGCCACCTATCAATTTCGGTCATTGAGCAATGTGAGAAAAATAATATAAAGTTTGTGTTGTTGCCTCCCAACAACACCCACCTCACGCCACTTGACGTTGCCTATTTTCGTCCCCTGAAGAAGGCATGGCGAAAAAATTTGTTAGACTGGAAAAAAAGAAACCGCGGCACATTGCCTAAATCATTGTTTCCTGTTTTATTGAATAAAACATTGAACAGCTTAACAAATTCAAAAATGAATGCAATCTCTGGGCTTAGGGCATGTGGCATCATACCTTTAGATAGAAACCAAGTCCTCAAACGAATGTCAGATTTAAAGACAGAAGATAATAAAGAAGTGTGGTCTACTACATTTGAAGAGACCCTACGAGTAGCACGAGAAGCTCAACCAGTAAGAACACGACGAAATACAAAAAATAATGTCCCTGCAGGTCGACCCATTACAACAAAAGCTCTCGCTGATGAACAACCTATGAATGTTGATGATCTTCAAAGTCAAGAGCTACTGTTTGTATCTGATAAGAAAAATGTTGAAGAATCAAATGAAATTGAGCCTGAAAGAAAATTAATTTAA
Protein Sequence: MDSVTISEASGLLKHLNCPEVLYWLKIFYFIMPHVQIFKQSQMRGINSVQMQKTIEQFQQQIIHIINLRNSTDNDNQERNNEEPARKRQKTTGGDNRAAIAKKVCDTILSQISDRFDFRNYLSTAKLFDSQNFKTYSHSFSQKNVEETVKSYPMLDRVKLKSELSVIYERDDMCDVGGVLPLLVFITDNNLKKGFDGNIQTENLEKAIADGKLSIRAAAEIYSVSKSTIHRKYHGENSRRYGGQTVFSAKDEMHIANGLLLAAEWGFPFTHMDLRHIVKRFLDRKGVNIKIFNNNLPGRIWLKSFLNQHKGLLSNRLSENIKRARAIVSAETINSYFNNMEVTLANVPPDNIINFDETNISDDPGQQTVLVRKEAKHSERIIDATKSHTSVMFSIAGDGTLLPLHIVYKSKHVHDAWTDNGPEGAIYDSGKSGWFDGFLFERWFTKVALEYLRRRDGEKIIIGDNLASHLSISVIEQCEKNNIKFVLLPPNNTHLTPLDVAYFRPLKKAWRKNLLDWKKRNRGTLPKSLFPVLLNKTLNSLTNSKMNAISGLRACGIIPLDRNQVLKRMSDLKTEDNKEVWSTTFEETLRVAREAQPVRTRRNTKNNVPAGRPITTKALADEQPMNVDDLQSQELLFVSDKKNVEESNEIEPERKLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -