Mmel157563.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001892.1:488401-490007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-07 0.00017 24.7 0.0 1 36 17 51 17 55 0.94
Sequence Information
- Coding Sequence
- ATGCCAACTTTTTATAAGAGAAAAAGAGGATCAACAAGAGGTCAGTGGACGGAAGAGCAACTAAAAAATGCCGTGAGAGCGGTGAAGGAAGGACACAGCTTAACTGAAGCAGCAAATATGTTTAGTGTTCCTTGGTCGACGCTTAAACGTAGAATGACAAGTGGGTGTCTTATTAAAAAACAAATGGGGCCAACATCATTTTTAGGAGAGCATAATGAACAAAAATTAGTTATGCATATCAAGAAAATGCAGAGGTTTGGTTTCTCCCCGACACGAAGCGAAGAAATGGCTGGTCTCGACTGGTTGCATTCATTTTTACGCAGACATTCGGATCTTACCATAAGAAAAGCAGAGGGCATTTCTTTGGCTCGAGCTAAAGCAATGAATAAAGAAAGTGTGACAAACTATTTCGAATTGTTAGGTAATGTGTTAACCACCAacggtttgactgacaaaccgagaaacatttataatgtcgatgaatcggggcttcaactcaataacaaaccaggatatgttgtagcagctaaaggatccaaaagtgttgcgaatatagtagcaggggaaaaaggcgaggcaattaccatcatagcatgctgtaacgcagaaggcacatttcttcctcctgcttgtatctttaagggaaaaaacgagaaggctgaatggaaggatggaatgccacctggctctgttatttacatggcccagaaatcggcatatattacatctgacattttttatttatggctgaaggatcattttgtgccaagaaaatcagaagggactgtcgtaccaatattggactggcacagttcacattgtagctccgtagaaattttagaatttacagatgcaaacaatataatattgttatgcctaccaagccatacgacgcaCTACTTACAACCTCTGGATCGAGCCTTCTTTAAAGCACTCAAGACTTATTTTTACAATGGTTGCAATCTGTTCATAAAACAGAATCCCACCAGAAAAATTACCAGACTATATTTTGGGGGCATATTGAGTGATGCTTGGGGAAGAGCTACATCGTCGGAAAATGGCATATCTGAAGCTTCTCCGCAACCGGGATGCTCAAGAGATCCTGAGGACGTTCATGAAGCACCAGTGGAAACCCTAAATGAAAATGTAGTTATTAACAATGATGTTACTCCTGGCAAAATGTTGGATACTATTTCTCCGATAAAGACTGTGACTAAAATAGAACAAGCCAGAAAGAATGCCAGGACTATAGCCACCATCCTCGACACACAGAATAATATTAAAAACTTGAAAACTAAATTACGTCAAAAGAAGGGGAAACAAACGCAGACCAAAAAGAAAAGTTTTCTGACTCTGACACCGAATCGGAACAATCTCCACAACTGCAGGACGAAGACAGTGATGAAGAAAAGAAGTGTTGCTGTGCTGGTTGTGGTGAAGAATACCAATCCACAAAAGAAACAGAGGATTGGTTAA
- Protein Sequence
- MPTFYKRKRGSTRGQWTEEQLKNAVRAVKEGHSLTEAANMFSVPWSTLKRRMTSGCLIKKQMGPTSFLGEHNEQKLVMHIKKMQRFGFSPTRSEEMAGLDWLHSFLRRHSDLTIRKAEGISLARAKAMNKESVTNYFELLGNVLTTNGLTDKPRNIYNVDESGLQLNNKPGYVVAAKGSKSVANIVAGEKGEAITIIACCNAEGTFLPPACIFKGKNEKAEWKDGMPPGSVIYMAQKSAYITSDIFYLWLKDHFVPRKSEGTVVPILDWHSSHCSSVEILEFTDANNIILLCLPSHTTHYLQPLDRAFFKALKTYFYNGCNLFIKQNPTRKITRLYFGGILSDAWGRATSSENGISEASPQPGCSRDPEDVHEAPVETLNENVVINNDVTPGKMLDTISPIKTVTKIEQARKNARTIATILDTQNNIKNLKTKLRQKKGKQTQTKKKSFLTLTPNRNNLHNCRTKTVMKKRSVAVLVVVKNTNPQKKQRIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988164; iTF_00988132; iTF_00988166; iTF_00988167; iTF_00988159; iTF_00988128; iTF_00988162; iTF_00466024; iTF_00466023; iTF_00988171; iTF_00988212; iTF_00988058; iTF_00988316; iTF_00988125;
- 90% Identity
- -
- 80% Identity
- -