Mmel150721.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001728.1:1045418-1047704[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 6.3e-05 26.1 0.0 2 41 62 102 61 104 0.89
Sequence Information
- Coding Sequence
- ATGAAATCAGTGATTGTGTGCACGACAGAGGAAATCCATAATAAACTTACCGTAGATTTGGATGGCTTGGGACGAGCGGTTGTCTTGGGACAAACTGCAGATTGGTTTTTGAAAGTCCTTGACACTTCTTATCAGTCGCGAGTGCCTATTGGACATATGTGTCGCAAATATCGCGATTTCAGTGATGAAACACTTCAAACAGCACTAAATGAAATTGGAACAAATAATTTAACTTTTAGAGAAGCTAGTGATAAATATGGCATACATAAATCCACTTTGGTAAGAAAGTACAACCGTACAAATATGAAACGTGCTGGTGGACAAACAATGTTAACAGCAAATGAGGAAAAGAACATTGCCGAAGCAATCACACAAGCAAGTGAACGGGGGTTTCCCTTAGAACGAGGCGACATACAAGATTTAGTACAGGGATATTTAAACAGACTAGGCAAGACCATCACAAAATTTCGGATCAATAGGCCTGGCAACAGCTGGTACTATGGTTTTATTTCCAGACATCAAAATTTAACGTTGCGACTGTCGGAGAATATCAAGAGGAGCCGGGCTGCGGTTTCAGTAGATATCCTTGatgaatattttgataatttaactgattcattgagggatgtgccaccacagaacattctaaattatgatgaaagtggatttgtcgatgatccaggacgaaataaagtggtggtaaggagaaaagcaaaacacgctgagagagttatggactcgaccaaaacaaatacttcagtcatgttttgtgtaagcggatctgggattacattgccaccttatattgtttataaggctgatcatctttggagcacctggacagaaaggggtccggaaaatgctcgatacaaccgtagcaaatccggctggtttgaccaggcgctttttgaggattggtttatgacagtcgcgttgccttacctccggaacttgaatggacccaaagtgctattgggtgacaatctcgctagccacatttctctcaaagttctagaagaatgtaaaacaaataatatcagatttatacttttaccgcccaaTAGCACTCACCTTTTCCAACCACCGGACGTAAGCTGCTTTAGATCTATCAAAGGAACATGGAAAGAAGTGTTAAAAGTCTGCAAAAAGAAAAACCGAGGACCTTTAAGAAAAGACATGTTTCCTAGTTTACTTCGTCGAACATTAGAAAAAGTGGGTGCCAATCATAAAGATAACATTATTGCAGGATTTAGAGCCACAGGAATATTTCCACTTGATCGTAACGCTGTGCTGAAGAAGTTGCCAAATCAAGATGTTGCTGATAACGATACTCCCGCACGGGTAATTGGCGAGACAATGAAAAGCTTTTTTGAAGAACTTCGATATGGAAAAAGAGGAATCAACGCTTCAGCAACTCCCAAGCCTGCAAGGAAAAAGAAAAAATTAGACGTGCCTGCTGGAAAGAGTGTAGCGTTGGAAGACGTAAAAACAGCTGAAGAAAATAAGGCGACACCATCCACATCACAAACGCCGGCCAAAATGAAAAAGCTGTCGTCCGCTGATACGTATGAACTCCAAGACACTGACTCTGAAAATGGAAAAGCTGGAGGATTTTCTTCAAATGACGATGAAATTGAAGAATCAGAGACTTCAGCAATTATTATTGAACCGGATAAGAAAGGATTTAATGAGTTAGAAATACACGACTTCGTGATAGTGGAACTGAAGTCTGTGAAGGGAAGGAGTCAACGATTCATTAGTAAAATTATTGAAACAAATCCACATCGTTGCTCATTTGTAAAAGAAAGCGCAAAAACTAGGAATGCTTTCATTTTCCCTGAAAACCCTGAAGGGGATATCGAAGGTGCCGAATATATTGTTACGCTGCCACCTCCTACAAAGCTGAGAAGGGGAGCATTTTCATTTGACCCTGGTGTGCTGGAGCGATACTTGCGTATCTACGAGTGA
- Protein Sequence
- MKSVIVCTTEEIHNKLTVDLDGLGRAVVLGQTADWFLKVLDTSYQSRVPIGHMCRKYRDFSDETLQTALNEIGTNNLTFREASDKYGIHKSTLVRKYNRTNMKRAGGQTMLTANEEKNIAEAITQASERGFPLERGDIQDLVQGYLNRLGKTITKFRINRPGNSWYYGFISRHQNLTLRLSENIKRSRAAVSVDILDEYFDNLTDSLRDVPPQNILNYDESGFVDDPGRNKVVVRRKAKHAERVMDSTKTNTSVMFCVSGSGITLPPYIVYKADHLWSTWTERGPENARYNRSKSGWFDQALFEDWFMTVALPYLRNLNGPKVLLGDNLASHISLKVLEECKTNNIRFILLPPNSTHLFQPPDVSCFRSIKGTWKEVLKVCKKKNRGPLRKDMFPSLLRRTLEKVGANHKDNIIAGFRATGIFPLDRNAVLKKLPNQDVADNDTPARVIGETMKSFFEELRYGKRGINASATPKPARKKKKLDVPAGKSVALEDVKTAEENKATPSTSQTPAKMKKLSSADTYELQDTDSENGKAGGFSSNDDEIEESETSAIIIEPDKKGFNELEIHDFVIVELKSVKGRSQRFISKIIETNPHRCSFVKESAKTRNAFIFPENPEGDIEGAEYIVTLPPPTKLRRGAFSFDPGVLERYLRIYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987823; iTF_00987807; iTF_00987940; iTF_00987881; iTF_00987727;
- 90% Identity
- iTF_00987940; iTF_00987823; iTF_00987807;
- 80% Identity
- -