Mmel155250.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001840.1:19073-20655[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 1.5e+03 2.4 0.1 28 39 119 130 119 134 0.88 2 2 3.6e-06 0.00096 22.3 0.0 7 39 204 237 203 242 0.88
Sequence Information
- Coding Sequence
- ATGAAAACCGTGAAAAATGAAAACCAAAATGAAAAAAGTGATGTTGACAAAACAGACTCGAAAACTGCATACAGTAATTTCTTGGAGATCTACAGCAAAGAGTACTGGAAATTGATTTATGATAAAGAAGGTTCTTCCTTATTTCTGGACACGTTTCCTTTATTcaaaatgtcttaccgattttcttctcaagagtatgcggacatgcattttgtgtatggctactgtaactgcagtgcacgTCAAGCAGTTATTGAATACCGACATCGATTTCCCGATAGGCGCATTCCTCATTACAGAACGTTTCTGGAAGTACACAGACAATTTCGTGTACGTCGAATCGCTAGACAACTAGTGCCACGAACGACAGTTTGGCGAATTTTAAAACGTGAGGGCTTATATCCATATCACTATAGCCGAGGACACGGTTTGCTTGAAGCAGACCACTATGCTCGTCTACAAATCCGACAAAACAAGTGTGAAATTCGGATACGTACTTCTTCTGGTGGCTTACGGGCACAAGCCGACACCGACAATTTCGGGAATGCGGACTGCGTCCATAGGTATCTTTTAGACCGAGGAGTAAATTTGCCAGCAGACTTAGAGAAAGAAGCAGTAGCTATTGTTACAAGGGATCCAACTCTCAGTGTACGTCGAATCGCTAGACAACTAGGAGTGCCACGAACGACACTTTGGCGATTTTTAAAACGTGAGGGCTTATATCCATATCACTATCGCAGGGGACACGGTTTGCTTGAGGCAGACCACTATGCTCGTCTAGTTTATTCTATCTGGATATCAAGACAGTCACGGCTTCATTTTAATTTATGCAGAACAGTCCTCTGA
- Protein Sequence
- MKTVKNENQNEKSDVDKTDSKTAYSNFLEIYSKEYWKLIYDKEGSSLFLDTFPLFKMSYRFSSQEYADMHFVYGYCNCSARQAVIEYRHRFPDRRIPHYRTFLEVHRQFRVRRIARQLVPRTTVWRILKREGLYPYHYSRGHGLLEADHYARLQIRQNKCEIRIRTSSGGLRAQADTDNFGNADCVHRYLLDRGVNLPADLEKEAVAIVTRDPTLSVRRIARQLGVPRTTLWRFLKREGLYPYHYRRGHGLLEADHYARLVYSIWISRQSRLHFNLCRTVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -