Mmel012424.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000103.1:946655-950066[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0003 0.08 16.2 0.0 17 39 91 113 78 118 0.90 2 2 0.034 9 9.6 0.0 9 27 144 162 141 170 0.81
Sequence Information
- Coding Sequence
- ATGGCGTCGTATCCAACGGAAGTGCGTGTGGAATTAATAAAATATTATTATAGAAATGGGGAATCTTTTGCAGCTACGGCAAGACACTTGCGTACTCTATTCTGGAGAAATAACGCACCAACGGAAAACACTATAGAAAGGATTGTAGTGAAATTTGAAGCAACAGCATCTGCGGCAGACGAGAGATCAACTGTTAGAGAACGTCAAAAGACCATCCGGGTACCGGAAACCATAGAACGAGTACGGGGGCACTTTACAGCTCAACCTTCAACATCGACCTCAAGAGCATCTCAAGAACTTGAAATACCCCGTACAACACTAAGGCGGATCCTAAAGCAAGATCTAAAGATGAAAGCATACAAAATCCAGATCGATCAGCCGTTGAGACCGTTTGATATGGAGCGACGCTACAATTTTGCGAACGAAATCATCGAACGCATTGAAAATGGCAGCATGTCATTGGAACGAGCTGCGAAATGTTATCGTTGCTCGAGGCTCTCACTTCGAAAACCTGATTTATTAAACCgcacaggcagagtttttatggttccagttgaggatcgTTCTGCTGATACGTTGCTCCCTATTATCCGAGATAGGATTTACGAGGGAACAACTATCATCAGCGACTACTGGAAATCATACAACTGCCTGTCAATGCATGGGTATGAACACCTGCGGGTTAATCAATCCTTAAATTTTAAGGACCCTGACACAGGTGCACATACCAATGCCATAGAATCCTCGTGGGGAGCCGCTAAACGAACAATGAGTTCTTGCGGACGAAAGAAAGGTCACATTCCGGGCAATTTAGCAAGGTATATCTTTCAGAAAAGGTGTGCTGAGTTTAAATTAGATCGGACTATGGAATTTCTACGTTTGGCGGGATTGTTGTACGATCAGAGAATTTCCACGGGACGAGGACTTCACTGA
- Protein Sequence
- MASYPTEVRVELIKYYYRNGESFAATARHLRTLFWRNNAPTENTIERIVVKFEATASAADERSTVRERQKTIRVPETIERVRGHFTAQPSTSTSRASQELEIPRTTLRRILKQDLKMKAYKIQIDQPLRPFDMERRYNFANEIIERIENGSMSLERAAKCYRCSRLSLRKPDLLNRTGRVFMVPVEDRSADTLLPIIRDRIYEGTTIISDYWKSYNCLSMHGYEHLRVNQSLNFKDPDTGAHTNAIESSWGAAKRTMSSCGRKKGHIPGNLARYIFQKRCAEFKLDRTMEFLRLAGLLYDQRISTGRGLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -