Mmel169028.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- clz9
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010002268.1:444708-446618[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-08 1.9e-05 27.7 0.0 2 42 47 88 46 91 0.88
Sequence Information
- Coding Sequence
- ATGAAAAAAAGATTTTCATTAGGTTCTTTTCATTACCTACCCAAAAAATTTTTTGAATTATACAGGTCTCGATATGGTGCGTTACTACGACCGTTCATATACCTGCTGTCGCAAGGGCAAGCAGTCTTATCTTATAATGAAGGTGCCTTAAGCCGTGCCGTTGCAGATGTAAACTCTAATAAATTTACTATATCGGCTGCAGCTGAGCACTACTCAGTCCCCCCAACAACGTTATGGCGAATGGTGCATAAGAAAAATCTACACACATCAGCCGGACACCCCACGGTATTTAGTGAAGAAGAAGAAAGGGCAATGGTCGACCATCTCGTGTTGGTCGCTTCATGGGGGTTTCCATTCGACAAGATGGATTTGCGTTTACTAGCAAAAGGCTATTTAGAAAGACGTGGAATAACTATAAGAAGGTTTAAAGGTAATTTACCTGGTATAGATTGGGCCTCAAAGGCAGCCGTCTCCGCCAGTGATATAGACCAATTCTTTAATAATGCTAGGGATATACTTGAAAATGTCCATCCTTCCTGTTTGATCAACTTTGATGAGACAAACCTAACGGACAATCCAGGTGCAAAAACCTTTATTTTTAAACGTGGCACCAAATATCCGGAGCGGGTAGTTAATGCCACGAAAACTGCTATCAGTTTAATGTATGCCGGCACAGCCGAAGGTGAACTCCTACCAATTTATGTGGTGTATCAGGCAGACCACCTCTGGGACACATGGTTGGATGGAGGTCCTCCTGTGACGCGCTACAATCGTTCAAAGAGTGGCTGGTTCGACAGCACCACGTTCGAGGACTGGTTTTTGAAAGTGATTGTTCCATTTTGTAGAAACAAGGAAGGAAGTAAGGTTGTTGTGGGAGACAACTTGTCCTCACACTTTTCTCGTTCTGTACTGCTGAAGTGTGAAGAACTTGAGATTATATTCATGTGTTTACCACCAAATTCAACCCATATAATGCAGCCACTAGATGTAGCTTTTTACGCCCCATTAAAACGATATTGGAGAGAGATCCTCACGATATGGAAGAAAACTTCAGGAAGAAAAATGCCTGTGTTATCAAAAGATGTGTTTCCTGCTCTTCTCAAAAAACTCCAAGACAAGCTGGATGATAATGGAAAGGGTGGTGAGAATCTTGTAGCTGGATTTGTTAAAACAGGACTGCATCCCTGTAACCCTTCGAAACCAAAAGAGAGGCTTCCTAGCGTGAACACCCCAAGGCAGAATGTAAACAAGACCGTATCTGATGTTGTTATTGAGATGTTGCAAGAAATGAGAGGTGGTTCTAGTGATGAACCACCAAACAGGAGGCGCAAGAGGGTTTTAACTAAACCTGGAAAAGCCTCACCGAAACCGATCTCCTACAAGCAACAGATGTTCCGGCAACTTCAAAATGCCTCACTGAGTGATGATGATGATCCTGTACCTGAAGATCAAGGTGACGATGTTATAAGTGACACTTCTTCAACAAGAGACGCAGATGTTCAAAACGATTATTCAACAGAATATGAGAAAAATGACTGGATTTTGGTAAAAATTGAGGATGTCACCCCAACAGCAGAGGCCACCTGCTGTCATGTAGATTATTTTAGGAGACTAAAAACAAAGGACAGGTGTGCAAAATTTGTTAGGCCCTCTTCTGCAGATGTTGATACTATTACCAAGGAGTTAATAATAAAAAAATTACCACAACCGCTTGAGGTTATCACTGGTAGACGCTCATTTTTTCAGTTTGATGACAATATTTTTGAAAATTATATAATACAGTAA
- Protein Sequence
- MKKRFSLGSFHYLPKKFFELYRSRYGALLRPFIYLLSQGQAVLSYNEGALSRAVADVNSNKFTISAAAEHYSVPPTTLWRMVHKKNLHTSAGHPTVFSEEEERAMVDHLVLVASWGFPFDKMDLRLLAKGYLERRGITIRRFKGNLPGIDWASKAAVSASDIDQFFNNARDILENVHPSCLINFDETNLTDNPGAKTFIFKRGTKYPERVVNATKTAISLMYAGTAEGELLPIYVVYQADHLWDTWLDGGPPVTRYNRSKSGWFDSTTFEDWFLKVIVPFCRNKEGSKVVVGDNLSSHFSRSVLLKCEELEIIFMCLPPNSTHIMQPLDVAFYAPLKRYWREILTIWKKTSGRKMPVLSKDVFPALLKKLQDKLDDNGKGGENLVAGFVKTGLHPCNPSKPKERLPSVNTPRQNVNKTVSDVVIEMLQEMRGGSSDEPPNRRRKRVLTKPGKASPKPISYKQQMFRQLQNASLSDDDDPVPEDQGDDVISDTSSTRDADVQNDYSTEYEKNDWILVKIEDVTPTAEATCCHVDYFRRLKTKDRCAKFVRPSSADVDTITKELIIKKLPQPLEVITGRRSFFQFDDNIFENYIIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988184;
- 90% Identity
- -
- 80% Identity
- -