Mmel099829.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000927.1:827307-834504[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0084 2.2 11.5 0.0 7 40 32 66 28 69 0.87 2 2 0.00071 0.19 14.9 0.0 7 39 117 150 113 154 0.91
Sequence Information
- Coding Sequence
- ATGTTGCCGGTCTCGTTAGTCTCTGTTCGGGAACGCGGACTGCGTGATTATCTTTTCGACCAAGGAGTAAATTTGCCAGCAGACTTAGAGGAAGAAGCAGTAGCTATTGTTACAAGGGATCCAACTCTCAGTGTACGTCGAGTCGTTAGACAACTAGGAGTGCCACGAACAACAGTTTGGCGAATTTTAAAACGTGAGGGCCATATCACTATCGCAGGGGGCAGATCACAATGCTCgcgTATTCCTCATTACAGAACGTTTCTGGAAGTACACAGACAATTTCGGGAATGCGGACTGCGTGATTATCTTTTCGACCAAAGCATAAATTTGCCAGCAGACTTAGAGGAAGAAGCAGTAGCTACTGTTACAAGGGATCCAACTCTCAGTGTACGTCGAATCGCTAGACAACTAGGAGTGCCACGAACGACAGCTTGGCGAATTCTAAAACGTGACGGCTTATATCCATATCACTATCACAGGGGACACGGTTTGCTTGAGGCAGACAACTATGCTTGTCTAGTTTATTGTACCTGGATATTAAGACAGTCACGGCTTCATCTTAATTTCTGCAGAACAGTCCTCTGGacagTAATGGATAATCTTGGATACGACGATCCATTTTTATCAAAAAACCTACCTTATACTAATACAGCTTAA
- Protein Sequence
- MLPVSLVSVRERGLRDYLFDQGVNLPADLEEEAVAIVTRDPTLSVRRVVRQLGVPRTTVWRILKREGHITIAGGRSQCSRIPHYRTFLEVHRQFRECGLRDYLFDQSINLPADLEEEAVATVTRDPTLSVRRIARQLGVPRTTAWRILKRDGLYPYHYHRGHGLLEADNYACLVYCTWILRQSRLHLNFCRTVLWTVMDNLGYDDPFLSKNLPYTNTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -