Mmel142676.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
-
Assembly
GCA_935421255.1
Location
CAKXYX010001549.1:48139-50910[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-08 1.2e-05 28.4 0.1 1 41 29 68 29 70 0.91

Sequence Information

Coding Sequence
ATGGCGATGAACTGGATGACATCGAGATGTCTGATAATGAACTTGCCACAAGCTCGTATACGTAAAACCAATAAAGCCTCTTGGTCGGAAGAGGCGATGAAAGGTGCCATTCAAGCTGTAAGGGAAGGAAGTAAAATTAGAAAGGCGAGTGGAAGATATTCTGTTCCCTTTAGTAGTTTACGAGACCGTTTAAGAAAAGGCTATTATGCCCCAAGCATGGGAAGACACACCGTTTTTAGTAAAgaacaggaagcagaaattaaggaacaactgcttacactatcacggatgttttatgggctaacacccctacaattacgtttagcagcgtatgaatatgccgaagtcaacaaaattccgaattcgttcaacaaaatcaataaattagcaggaaaagattggttatatgggtttatggctaggaattctgaattaagtttcagaaagcctgaagcaacctcgctaaacagagtgacagcttttaacaaaatagaagtggacagatttttcgaaaatttagaaaaagttatgaccactcataaatttaacccaacaaaaatttttaacatgaatgaaacgggcattacaacatgccataagccagcgcgaattgtcggacccaaaggacaaaagcaagttggggcaattacaagcctggaaaggggaaaaactacaaccctgtgttgtgcaatgagtgcagcgggtactttcgtgccaccgatgtttattttcgctcgaattagaatggcttctggcttggaacaaaatggaccaaccggttcaatataccaatgctccaaaaatggttggattaacgaggatttgttcagggtctggctgagacattttGTAAATTTTACAAACGCAAGCAAAGAAAATCCGGTTCTTCTTATTGGGAACTTTTGCACTCCGAATTGCGACATATATATATTTGGATTGCAAATTTTGATCTTTTCTTATTTCTTTTGTAAACCATACTGCAACGAAATGGATCGTATCTTTATTAATGAAATAAAGAGAGCGAAGGCGAAGGGAGATTTAACAGTGTTATTTCCATACTATGAACTGGAGAGTGAGTTTATGGAGAGACTCTGCTTAGCAGAGGGATTCTCTATCAAGTTACTATTTGATGAGTGGCTCCAAGATGAGATGCTGAAAGAATGTGCGCCAACTAATAGCACCATCATTAGACTGGAACCAGATCCTTTTGACCTGATAATGTTGCCGAAAAGTTCCAAGACTAAACAGAAAAACAATTTATTATATTATGACAGTGGTCTAGACTGGAACAATACAGGCAAAACAAATGATCTGGATATGAATTCCAGCATGCATTATTATATGGATGAAGAACCTACATCCATGGAATGCGATAACGCTGACAGTGAGCAGTTTACTCAAATGGTCGTTGAGACCAGTGCTGCAATGCTTTCACGAAATATATTCGATGTGGTCAGTGTGGAAAAGACCAATGATGACGCTATAAATATTGTCAAACTGGCTGATATGGACAATCACGCCAGTCACTGCTCTTTGAAAATTTACAACTTTTGTCGGAATAATGGCGTAATTATGTTAAGTATACCTTCTCATACTTCACATAGACTCCAGCCACTGGACCTAACTTTTTTTGGGCCACTAAAAAAAGCCTACAACATGGAGTGCGAATTATTCATGAAAAGTCATGCATATCAGAGAATCATCAACACTGACTTACCTGGATTATTCACTAAGGCGTGTCTTAAAGTAGCTGTAGCTCAGAAAGCAGTCAAAGCATTTGAAATTGCTGGAATATTTCCCATGAATCCCGATGTATTTGGTGATCAAGATTATTCAGTAGTAAGCGAACCTGATAAGGAATCCACAAACAATTTGGCGAATAGCAACAAACAGACTGAACCAGAAAGTATTCAACCAATAGTTGGATGCTCTGGGGTTCACACAAATACAATTAAAAGGGTCATTGGTTCTAATGTTTCGTTTTCACAAATTTCACCCAAACCTGTTCCCAAGATACCAGTCACCAGAAAAGTTATTAAAAGAAAGAAACAGAGTTCAGAAATTCTAACGTCAACCCCTAAGAAAGAGCAACTTGAGATATTGGAAGCAAAAAGGAAAAACGATTTGGGAAAATCAGCAGGAAAAATAAATGGAAGTAAAAATAAAAACATACAAACCAGAAAAAAAACTACCAAAAGAAAAGTTTTTGAAAGTGAATCTGGGGAAGATGATGAAGAGCCCATTATCGATGGCGATGAACTGGATGACATCGAGATGTCTGATAATGAACTTGATGCAACACAACAAAAAGAGCAATCagaagaagcatgcatcatttgcaatgaatttgggaaaaccgaggtttggtacagatgttctgcgtgtggacgatgggcccatgcaagctgcacaggagtagatcgaccacatggatatatttgcgatttttgCAAACCTTAA
Protein Sequence
MAMNWMTSRCLIMNLPQARIRKTNKASWSEEAMKGAIQAVREGSKIRKASGRYSVPFSSLRDRLRKGYYAPSMGRHTVFSKEQEAEIKEQLLTLSRMFYGLTPLQLRLAAYEYAEVNKIPNSFNKINKLAGKDWLYGFMARNSELSFRKPEATSLNRVTAFNKIEVDRFFENLEKVMTTHKFNPTKIFNMNETGITTCHKPARIVGPKGQKQVGAITSLERGKTTTLCCAMSAAGTFVPPMFIFARIRMASGLEQNGPTGSIYQCSKNGWINEDLFRVWLRHFVNFTNASKENPVLLIGNFCTPNCDIYIFGLQILIFSYFFCKPYCNEMDRIFINEIKRAKAKGDLTVLFPYYELESEFMERLCLAEGFSIKLLFDEWLQDEMLKECAPTNSTIIRLEPDPFDLIMLPKSSKTKQKNNLLYYDSGLDWNNTGKTNDLDMNSSMHYYMDEEPTSMECDNADSEQFTQMVVETSAAMLSRNIFDVVSVEKTNDDAINIVKLADMDNHASHCSLKIYNFCRNNGVIMLSIPSHTSHRLQPLDLTFFGPLKKAYNMECELFMKSHAYQRIINTDLPGLFTKACLKVAVAQKAVKAFEIAGIFPMNPDVFGDQDYSVVSEPDKESTNNLANSNKQTEPESIQPIVGCSGVHTNTIKRVIGSNVSFSQISPKPVPKIPVTRKVIKRKKQSSEILTSTPKKEQLEILEAKRKNDLGKSAGKINGSKNKNIQTRKKTTKRKVFESESGEDDEEPIIDGDELDDIEMSDNELDATQQKEQSEEACIICNEFGKTEVWYRCSACGRWAHASCTGVDRPHGYICDFCKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-