Mmel161534.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010002019.1:90106-91951[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-08 1.3e-05 28.3 0.1 3 39 16 54 14 60 0.92
Sequence Information
- Coding Sequence
- ATGCCCAGAAGTAAAACGGGAGTTAGGCGACCTCCAGTTGATGTTGACAGCCTTAAAGAGGCAGTATTAGCAGTTGCGGGCGCAGAAGAAACCATTTCTCTCCGAGAAGCGGCAAAAGTCTATAATGTATCAACTGCCACTCTATCACGACATATTCGTACTTACCGGGAAGCTGGCAACGAAGAATTCAAATATGAAAATCGGTTAGACATAAAGGTGTTTTCAGCAGAAGAGGAGAAGAGTCTGGTAAACTACATCCAGACTGTCgcaaagatgcactatggcctgactaaaaaaggtgtgcgtgaacttgcatttcagtttgcaaaagccaacaataaaaaagttccacccaaatgggaaagtgagaatgtcgcaggcgaggagtggatgcgacactttatgaagcggcatgatcgtgatttatccattagaaaaccggaagcaactagtttggcacgagccacgagcttcaatcgagtaaatattgaaaagttcttctccaatttggaatatgttcaccggcgatttacacctattccgcctgaacgaatttggaacgccgacgaaactgggtgcacaacagtccaaattccaccaaaaatcgttgcacctaagggcttgaagcaagtaggaagtattacttttgcagaacggggacagttagtgtctgcgatttgtgtaatcagtgctacagggaatcatatccctcctatgctgattttcccaagagttaactttaaagatttcatgaagactggagctccccccggcactcttggctcagcaaacccgtctggctggtctactgatgaacaattcgtgaaattcatgaagcatttcataacacatgttaaacctacgcgtgagcaaccagtgcttcttgtaattgacaaccacgagacccactgttcttttgatgtcgtagaccttgcagcaaagaatggtattcatatcgttacttttccaccccacactagtcaccgcgtacagccgttagatgttacggtattcggaccattcaaaacgttttacaaccaaggcattgcttttcctcgagcttttacaatcaccaatatttgcaatggctttaaaagtacgggaatctaccccctagacaaaggagtgttcacagatgaccagtttttgcctgcatcggttactgacaggccgattcccgacaatatagaaggagcaacagcaggaccttcTAATGAAGCAGCAGTTGCACGGTCATACAATGCTCAAAATACAGCAAACAGTCCTAAGAAATCTGATTCTGTAACCTTTTTCCGGTCTCCAGAAGAGATTAGACCTTTTCCAAAAGCGCCCGCTCGGAAGAAGCAAAAAAGACGTTGTGGCTCTACAAAAGTTCTTACTGACACTCCTGAGAAGGAAGAACTTCTTCGTAAAAAAGAATTAAAACAAGAAAAAATAGAAAGGCAAAACCAAAAACATATTGCCCCTAAAAAGCAGAAAATAACTAAAATTTTATTTAATAATGGCAGCAGTGATGAAGAAGTATTGTATGAAGAAGAGAGCGATATTGAAGGCATAACTCTTAGCGATGTTATATCTTCCTCTTCCGACGATGAATACAGTATGGATATGATGCCTCCAAAACTAGATGAAATCACAGTTGGGGATTTTCTTCTTATCAGCTTTAGAGGAAAAAAAGAAACGGTACACTATGTAGGTTGCATCCTGAATGTAATTTCTTCCAGTGAACTTTCTATTAGGTTTTTACGTAAATCAATGCAAGAACCAAACACCTAA
- Protein Sequence
- MPRSKTGVRRPPVDVDSLKEAVLAVAGAEETISLREAAKVYNVSTATLSRHIRTYREAGNEEFKYENRLDIKVFSAEEEKSLVNYIQTVAKMHYGLTKKGVRELAFQFAKANNKKVPPKWESENVAGEEWMRHFMKRHDRDLSIRKPEATSLARATSFNRVNIEKFFSNLEYVHRRFTPIPPERIWNADETGCTTVQIPPKIVAPKGLKQVGSITFAERGQLVSAICVISATGNHIPPMLIFPRVNFKDFMKTGAPPGTLGSANPSGWSTDEQFVKFMKHFITHVKPTREQPVLLVIDNHETHCSFDVVDLAAKNGIHIVTFPPHTSHRVQPLDVTVFGPFKTFYNQGIAFPRAFTITNICNGFKSTGIYPLDKGVFTDDQFLPASVTDRPIPDNIEGATAGPSNEAAVARSYNAQNTANSPKKSDSVTFFRSPEEIRPFPKAPARKKQKRRCGSTKVLTDTPEKEELLRKKELKQEKIERQNQKHIAPKKQKITKILFNNGSSDEEVLYEEESDIEGITLSDVISSSSDDEYSMDMMPPKLDEITVGDFLLISFRGKKETVHYVGCILNVISSSELSIRFLRKSMQEPNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00307689; iTF_00988157;
- 90% Identity
- iTF_00307689;
- 80% Identity
- -