Mmel029277.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000240.1:278160-281766[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.018 4.8 10.5 0.0 17 39 91 113 78 118 0.90 2 2 0.00042 0.11 15.7 0.0 7 39 267 300 263 304 0.88
Sequence Information
- Coding Sequence
- ATGGCGTCGTATCCAACGGAAGTGCGTATGGAATTAATAAAATATTATTATAGAAATGGGGAATCTTTTGCAGCTACGGCAAGACACTTGCGTACCCTATTCGGGAGAAATAACGCACCAACGGAAAACACTATAAAAAGGATTGTAGTGAAATTTGAAGCAACAGCATCTGCGGCAGACGAAAGATCAACTGTTAGAGAACGTCAAAAGACCATCCGGATACCGGAAACCATAGAACGAGTACGGGAGCACTTTACAGCTCAACCTTCAACATCGACCTCAAGAGCATCTCAAGAACTTGAAATAACCCGTACAACACTAAGGCGGATCCTAAAGCAAGATCTAAAGATGAAAGTATACAAAATCCAGATCGATCAGCCGTTGAGACCGTTTGATATGGAGCGACGCTACAATTTTGCGAACGAAATCATCGAACGCATTGAAAATGGCAGCATGTCATTGGAACGAGTTGCATACAGTAATTTCCTAGAGATCTACAAAAAGAAGTACTGGCAATTGATTTATGATAAAGAAGGTTCTTACTTATTTCTGGAGACGTTTTCTTTATTCAAAATGCCTTACCGATTTTCTTCTCAAGAGTATTCGGTCATGCATTTTGTGTATGGCTACTGTAACGGCAGTGCACGTCAAACAGTTATTGAATACCGACATCGGTTTCCCGATCTGCGTATTCCTCATTACAGAACGTTTCTGGAAGTATATATACAATTTCGGGaatgcggactgcgtgattatcttttcgacagaggagtaaatttgccagcagacttagaGGAAGAAGCAGTAGCTATTGTTACAAGGGATCTAACTCTCAGTGTACGTCGAATCGCTAGACAACTAGGAGTGCCACGAACGACAGTTTGGAGAATTTTAAAACGTGAGGGCTTATATCCATATCACTATCGCACTATCgcgaaattgggttaa
- Protein Sequence
- MASYPTEVRMELIKYYYRNGESFAATARHLRTLFGRNNAPTENTIKRIVVKFEATASAADERSTVRERQKTIRIPETIERVREHFTAQPSTSTSRASQELEITRTTLRRILKQDLKMKVYKIQIDQPLRPFDMERRYNFANEIIERIENGSMSLERVAYSNFLEIYKKKYWQLIYDKEGSYLFLETFSLFKMPYRFSSQEYSVMHFVYGYCNGSARQTVIEYRHRFPDLRIPHYRTFLEVYIQFRECGLRDYLFDRGVNLPADLEEEAVAIVTRDLTLSVRRIARQLGVPRTTVWRILKREGLYPYHYRTIAKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987880; iTF_00987935;
- 90% Identity
- -
- 80% Identity
- -