Mmel040878.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000334.1:994220-994858[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 3.4e-06 30.2 0.0 2 38 19 55 18 61 0.93
Sequence Information
- Coding Sequence
- ATGGTTCGAACATACAAGCGTAAAGTCGGAGGGCGAGTGTCTCAGAATTATGGCAGGGAAACACTTGACACTGCTATTATGCAGTACAAAAGGGGGCAGATTACCCTGAGAGAAGCCACCGAGATATATGGCATGCCAAAAACAACTCTTCATCGTCATGTAAAGGCCCCACAACGCAAGCAAGGAGGGCAGACAGTGTTAACTTCGGCTCAAGAAAATAGGTTGGTTGAGTTAATCATTTTAGCTGGTGAATGGGGATATCCCATGGAGAAATTAGATATCCGCTACATGTTGAAGTCTTACTTAGACCGTCGAGGTTTACGAATACAAAAATTTCCTAATAATATGCCCGGATCAGATTGGGTAAACAAGTTTCTAGAACGACATCGTTCAAAGTTGACACAGAAGTTTGGAGAAAACATTAAAAGATGTAGGGCTGCGGTTGATCATGCAACTATAAATCAGTACTTCGACAATCTGGATGAAACCCTTAGGGGTGTTAAACCTGCAGCAATAATTAACTATGACGAAACGTGCTTTGTTGACGATGTTGGTAAAAAGAAAGTTGTTGTAAGAAGGGGACGATGCTCCCACCATTCATACTGTACAAGAGCGAGCATCTGTACGATACGTGGATGA
- Protein Sequence
- MVRTYKRKVGGRVSQNYGRETLDTAIMQYKRGQITLREATEIYGMPKTTLHRHVKAPQRKQGGQTVLTSAQENRLVELIILAGEWGYPMEKLDIRYMLKSYLDRRGLRIQKFPNNMPGSDWVNKFLERHRSKLTQKFGENIKRCRAAVDHATINQYFDNLDETLRGVKPAAIINYDETCFVDDVGKKKVVVRRGRCSHHSYCTRASICTIRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988295; iTF_00987828; iTF_00988025; iTF_00988026; iTF_00987837; iTF_00307550;
- 90% Identity
- iTF_00988295; iTF_00988025; iTF_00988026; iTF_00987837; iTF_00987828; iTF_00307550;
- 80% Identity
- -