Mmel024433.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- clz9
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000189.1:545432-547288[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-07 4e-05 26.7 0.0 5 39 22 56 18 60 0.91 2 2 2.4 6.3e+02 3.7 0.0 25 38 146 159 145 164 0.86
Sequence Information
- Coding Sequence
- atgccaaggacttatagaaagccgcttagaagtcgacagtacaaaaattattcagatgcagtgattgaaaatgcgctgcaatctatattagacggacgtttgacgattcgcggcgctgcaaaagaatttaaaatcccctatggaagtctttacaataggtataaaggacaacacataaataaacctggagctcaaactgtgttcactgacgctcaagaaaaggctatacttaaatcagcagcaaagtgtgcggaatgggggtttcctcttagtctctttgacttgcgtatcttcgctaaagcttgtttagaccgaactgggcgaattgttgccaaattttccaataatgtgcccggtattgactgggcctactcggttttacgacgtcatcaggattcttacagtcagcgtgttgtagcaaatataaaaagggctcgatatggagtttcaaaaaaaactatagaagaatattttaaacatttcgaaactgttgttaaaaacgtgcctagtagtaatatttttaactacgacgagtcaaatttaagcaacgatccggacaagaaacgctatatatatcgacgaggagtcaagtatccagaaaaaataataaacttttccaagtgctgcacatctatcatggtttgtgggtctgcaaatggtgttcttttaccaccttatgatatacatgtgatatacaagagcacacatctatatgacacttggaaggagagaggaccgtgtggctcaccgtgttgcaatgaaccatgttgctcacgtggaactagatataaccgaactgcaagtggctggattgacagcgtaacattccgggattggtttatgacatgttttttgccacacgcgaaaagactaaacggtcgtaaagtgttatttggagacaatttgttatctcatatcgatgaagatgtgttacgattatgtgaagaaaacgatatcaattttgtttgtttggcaccacactccacccatctgcttcagcctttggatgtagcattttttcgtccgatgaaagaggcatggcgaagtacattaacgaaatggaaacttgagaacttaaggctgaccactgttccaaaagacgcatttccgaatctcctcaaaaagacACTTCTAAGAATGGTCGAAATTAAATCGAAAAAAATTATGGTACCCCCGTTGGATAATGAAAACGGTGCCATCAAACGAAATCTTATAAGTGCATTTAATGCAACAGGAATATTGCCGTTTAACCCTGATCAGGTGTACAAGCGCTTACCATCTGATGATACCGTTGAGGCTGAAACTGAGAGCGTTCTGACTGAACTATTAAGAACTCAAAGATTTGGAGAATCATCCCATACTGTAAAAAGAAAGAAAAGACTAAATGTTGCTGCTGGAAAGAGTATTTCGACAGCGGATTTAATAGATGACCCCTCGCCAAGTGTAGAAAAAAAGCGGAAGACAAAGAAAACTAATCAGACGATTGACACACCACTTGAAGAAAACATATCTGATGACAATGAGACTGTAGAGGAAACATTCGAAGAAGAGGAAAACGAGAGAGAGCATGAAGAGGTAGAAGATAATATATTGACCGAGGGTTGTTATGTATTGGCAACATTTACTTCTCAGCGAGGAAAAAAAACATATCGTTACGTATGTTACATTAACGAAACCACTCCGCTGGTAGTTACCGGCTTAAAATCGTGCCAAAACAAAAAAACATTCAGATTAATTAAAGACGACATTTCTGAAATTGAACAGTCTGCTATTGTTGCATACCTGCCTATGCCTACCTTTCAAGAAGGGACTGAATTGGTCGTGTTTCCACACGAGATCAATGTTAATGAGGTTTAG
- Protein Sequence
- MPRTYRKPLRSRQYKNYSDAVIENALQSILDGRLTIRGAAKEFKIPYGSLYNRYKGQHINKPGAQTVFTDAQEKAILKSAAKCAEWGFPLSLFDLRIFAKACLDRTGRIVAKFSNNVPGIDWAYSVLRRHQDSYSQRVVANIKRARYGVSKKTIEEYFKHFETVVKNVPSSNIFNYDESNLSNDPDKKRYIYRRGVKYPEKIINFSKCCTSIMVCGSANGVLLPPYDIHVIYKSTHLYDTWKERGPCGSPCCNEPCCSRGTRYNRTASGWIDSVTFRDWFMTCFLPHAKRLNGRKVLFGDNLLSHIDEDVLRLCEENDINFVCLAPHSTHLLQPLDVAFFRPMKEAWRSTLTKWKLENLRLTTVPKDAFPNLLKKTLLRMVEIKSKKIMVPPLDNENGAIKRNLISAFNATGILPFNPDQVYKRLPSDDTVEAETESVLTELLRTQRFGESSHTVKRKKRLNVAAGKSISTADLIDDPSPSVEKKRKTKKTNQTIDTPLEENISDDNETVEETFEEEENEREHEEVEDNILTEGCYVLATFTSQRGKKTYRYVCYINETTPLVVTGLKSCQNKKTFRLIKDDISEIEQSAIVAYLPMPTFQEGTELVVFPHEINVNEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988302;
- 90% Identity
- -
- 80% Identity
- -