Mmel117358.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010001155.1:198534-200551[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.013 3.6 10.9 0.0 17 39 122 144 113 149 0.87 2 2 1.4e-05 0.0038 20.4 0.0 7 44 234 273 233 274 0.84
Sequence Information
- Coding Sequence
- ATGGAATTCTTTCAGCGAGCATCGAAAGATTACTTTCGCATTGTCGGAGAGCTAATTTGTCTGGATGAAATAGAAAATTATGATAATGGACACGTTTTATTCAAAATACATTACCGATTTTCTTCTCAAGAGTATGCGGAAATACATTTTGTGTATGGCTACTGTAACGGCAGTGCACGTCAAGCAGTTATTGAATACCGACATCGGTTTCCCGATAGGCGCATTTCTCATTACAGAACGTTTCTGGAAATACACAGACTATTTCGGGaatgcggactgcatgattatttttttgacagaggagtaaatttgccagcagacttagaGGAAGAAGGAGTAGCTATTGTTACAAAGGATCCAAATCTCAGTGTACGTCGAATTGCTAGACAACTAGGAGTGCCACGAACGACACCTTGGCGAATTTTAAAACGTGAGGGCTTATATCCATATCACTATCGCAGGGGACACGGTTTGCTTGCAGACCACTATCCTCGTCTATGGTCATCAGAGAATCCCAAAGCTATACGCCCATCTAAATTTCAACATGAATTTTCTATTAACGTTTGGGCGGCCCTAATCGATGACTTGCGCATTCCTCATTACAGAACGTTTCTGGAAGTACACAGACAATTTCGGGAATGCGGAATGCGTCACTATCTTTTCGACCGAGGAGTAGATTTGACAGCAGACTTAGAGGAAGAAGCAGTAGCTATTGTTACAAGGGATTCAACTCTCAGTGTACGTAGAATCGCTAGACAACTAGGAATACCACGAACGACAGTTTGGCGAATTTTAAAACGTGAAGGCATATCACTATCGCGGGCGACACGGTTTTCTTGA
- Protein Sequence
- MEFFQRASKDYFRIVGELICLDEIENYDNGHVLFKIHYRFSSQEYAEIHFVYGYCNGSARQAVIEYRHRFPDRRISHYRTFLEIHRLFRECGLHDYFFDRGVNLPADLEEEGVAIVTKDPNLSVRRIARQLGVPRTTPWRILKREGLYPYHYRRGHGLLADHYPRLWSSENPKAIRPSKFQHEFSINVWAALIDDLRIPHYRTFLEVHRQFRECGMRHYLFDRGVDLTADLEEEAVAIVTRDSTLSVRRIARQLGIPRTTVWRILKREGISLSRATRFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -