Mmel183078.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010003126.1:144510-145139[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 4.7e-07 32.9 0.0 1 41 15 55 15 59 0.88
Sequence Information
- Coding Sequence
- ATGCCAAGAAATTATATACGAAAAACAGCCCGTTCATCATGGACAGAAGAGGAGATGAAGCGGGTAATAAATGCGGTTAATCAAAAAGCATGTTCAATTAGAAAAGCAGCTGCACTCTTCTCGGTACCATATGGTACTTTGCAAGACCGTCTTAAAAATAGATTTCCAGTCAAGAAAATTACGTTAGGAAGAAAaccagttttttctgacgaacaagaaaaggaactggctgattatgtaagaaaattatcaaaccttttctatggattgacaacaaacaatatacggcaagttgcatatgattatgctgtgtcaaacaagattaaaaacaacttcaaccccaataaaggaacatgtggaaaagaatggctatatggtttcctaaggaggcatccccagctctccttaagaaagccagaagctactagtaagaatagagtactggcttttaataaagcagatatccacttgctttatgacaacatggaaatacttctggaaaaacacaattttggcccggaccgcatatataatgtggacgagaccgggataacaactgtgcacaaaccatctcgtgttattgcaccaaagggaagaaagcaagttgggtccattacaagtggagagtga
- Protein Sequence
- MPRNYIRKTARSSWTEEEMKRVINAVNQKACSIRKAAALFSVPYGTLQDRLKNRFPVKKITLGRKPVFSDEQEKELADYVRKLSNLFYGLTTNNIRQVAYDYAVSNKIKNNFNPNKGTCGKEWLYGFLRRHPQLSLRKPEATSKNRVLAFNKADIHLLYDNMEILLEKHNFGPDRIYNVDETGITTVHKPSRVIAPKGRKQVGSITSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987780; iTF_00987693; iTF_00987714; iTF_00987747; iTF_00987746; iTF_00987689; iTF_00987719; iTF_00987691; iTF_00987913; iTF_00987692; iTF_00987694; iTF_00987854; iTF_00987843; iTF_00987696; iTF_00987700; iTF_00065751; iTF_00065806; iTF_00065809;
- 90% Identity
- iTF_00987694;
- 80% Identity
- -