Mmel166925.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010002202.1:266611-272851[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00033 0.087 16.0 0.0 17 39 124 146 111 151 0.90 2 3 0.035 9.4 9.5 0.0 9 27 177 195 174 204 0.81 3 3 1.1 2.8e+02 4.8 0.0 18 43 247 272 246 273 0.88
Sequence Information
- Coding Sequence
- ATGTCTAAGGACTTTGGTTCTATAGATGAAAATATTTTTCTCAAAAAATTAACTGATTTGGGATTTGGATCATCCTTATTACATCTTATGGAGTTTTATCTGAATTTTCAAGATGGCGAAGTGCGTGTGGAATTAATAAAATATTATTATAGAAATGGGGAATCTTTTGCAGCTACGGCAAGACACTTGCGTACTCTATTCGGGAGAAATAACGCACCAACGGAAAATACTATAAAACGGATTGTAGTGAAATTTGAAGCAATAGCATCTGCGGCAGACGAAAGATCAACTGTTAGAGAACGTCAAAAGACCATCCGGGTACCGGAAACCATAGAACGAGTACGGGAGCACTTTACAGCTCAACCTTCAACATCGACCTCAAGAGCATCTCAAGAACTTGAAATACCCCGTACAACACTAAGGCGGATCCTAAAGCAAGATCTAAAGATGAAAGTATACACAATCCAGATCGATCAGCCGTTGAGACCGTTTGATATGGAGCGACGCTACAATTTTGCGAACGAAATCATCGAACGCATTGAAAATGGCAGCATGTCATTGGAACGAGCTGCGAAATGTTATCGTTGCTCGAGGCTCTCACTTCGAAAACCTGATTTATTAAACCGCAGATCTTCAACTGGAAACGTAAGGGCAACTCAAAATAACCTAAAGCCCGTAACTGATAATGAAGATAACGTGGTGAATGTGTTGGCGTTTTTTCAAGCTTATCCGCGGAGTTCAATTTCGACAGCAGCGCTGGATTTGGGTATTTCAAAAACATCAATCCACAGAATATTAAAAAAACATGGAATGCATCCTTTTTGTGAGATAACTGTTCAAGGAATACGTCTTGGTGATGAGGCAAGACGTGTCAACTTTTGCGAAATTATGATTTTGAGAATGACCGAAGATGCGAGATTTCTTCATCAGATTATGTGGACTGATGAATCGAAATTCAGCAGGCAAGGAATTACAAATCGCCGAAATACTCACTACTGA
- Protein Sequence
- MSKDFGSIDENIFLKKLTDLGFGSSLLHLMEFYLNFQDGEVRVELIKYYYRNGESFAATARHLRTLFGRNNAPTENTIKRIVVKFEAIASAADERSTVRERQKTIRVPETIERVREHFTAQPSTSTSRASQELEIPRTTLRRILKQDLKMKVYTIQIDQPLRPFDMERRYNFANEIIERIENGSMSLERAAKCYRCSRLSLRKPDLLNRRSSTGNVRATQNNLKPVTDNEDNVVNVLAFFQAYPRSSISTAALDLGISKTSIHRILKKHGMHPFCEITVQGIRLGDEARRVNFCEIMILRMTEDARFLHQIMWTDESKFSRQGITNRRNTHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -