Mmel098053.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melolontha melolontha
Gene Symbol
RTase
Assembly
GCA_935421255.1
Location
CAKXYX010000902.1:71984-78667[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-10 2.5e-07 33.8 0.0 4 41 1070 1107 1067 1111 0.90

Sequence Information

Coding Sequence
ATGCTTAATAAACTGAATATTTTACAATGGAACTGCCAATCTGCGGCAGCTAGAAGGACAAGTTTAGAAGTCATATTAACACAACAAAATATCGACATTGCTCTTATTTCCGAAACATGGTACAAACCCTCGCAGAAAATAACATTTAAAGGCTATCATATTATACGCAATGATCGAAAAGATAAGATGGATATGCTGGCACAGCCATACTATTTTTGCAGTGTTGATGCATATTGTGGAATCTTTAAGTGCATAAATACACCTTCTGTTTTTGGAGGAGACTTTAACGCCCATTATTCCACTTTTGGTTCTAGTAAAACAGAAAACGCTGGCATTATTCTAATAAAAGCTATTGATGAACACGATTTAGTATTTCTCAATAATGGACAACCTACTCGAATTACCCGACCTGATCAAAGTGAATCAGTTGTTGATATAACCCTAACAACCAGCAATATATCAACTAAATGTAATTGGAACCTATTAAGTGATTCATTTTCATTAGATCACTTTCCCATAATAATAGAATGGAAAACGAAATCAGAAGACTACACAAAATACCAAAATTACATTAACAAACACTATCAAAATGTAATCGAACCAGAAAGTAGTAGCGACAAAATTAAGCTCCTTACAGAAATCATAACGAAAGCTGCAGACTATTCATTCAAAATTAATGTACCATTTGTACCGAGAAACAAAGACTCACCTTTATGGTGGGATAGTGAATATACTGAAAAAGTAGGTATGAGAAAGAGAATTATAAACGCCTACAAAAAAAATAAAACAGTAGACAATTATATTAAATGTCGAGAAGCTTCAGCATATACAAAGAGATTCCTAAAACAAAAGAAAAGTGAGAGCTGGCGTAATTTTTGTAATAGTCTAGATAAAAATGCTTCGCCAAATTATATATGGAAGACGATTAGGAAATTTAGTAGGGCATACCAAAAACCTCACGAAAAAGAAGAGTCGTGGATACTTGAATTCCTTGGAAACCTTACATCTGCATATATAACAAATTCTAAGAAATCGTATCAAAAAAAGACTAGTAATTGCATATTTGATAAGCCCTTTACAATAGCTGAATTAGAATATATCATGTCTAATACAAAAGATACTGCTCCAGGCCTGGATAACATAACCTACAACATGGTAGCAAAATTACCACACATAAAAAGAATACTACTTATGGTATACAATAATATATGGTTAAACAATGAAGGTGTACCAGAGTTTAAAAATGTACTTGTTGTTCCTATACTCAAACAAGACAAAAATCCCAAATTAGCGATATCGTACAGACCAATATCGCTACTTTCGGTATACACTAAATTGTATGAGCGGCTTGTAAAAGAAAGATTGGAATGGTGGATAGTAGAAAACAACATTCTCCCGATGCAACAATTCGGTTTAAAAAAAAATTCTGGATCATTGGATGCATTAAAATATCTTATAACTAACATACAAAATTGTTTCGCGAACAACTCACACCTAGAGTGTGTGTTTCTTGATATCCAAATAGCATATGACTGTGTTAACATAGATAACCTAGAAAATAAACTCATTAATTTAGATATTCCATATAAATATAGTCCTCGGGTGGCTTCGCTAGGATTACCTCAAGGATCCAGCCTTAGCCCCATCTTATTTAATTTATATACACTAGATCTTCACGGTACAATAGGAAACCGAGTTTCCACTATACAACATGCCGATGACATTTGTATTTTTGCACAAAATAAGAACTTAAAGATGCTACAACAAACTACAAAAACCGCATTGAATATTACAATGAGGTGGTTAAGATCAAATGGATTCGATTTAAATCCTAAAAAGTCTGCAGTTATGTATTTTTCACGCCACCGAAGTTTACCAGATCATGGTATTAACCTAAAAGGAACTCAAATCCCGATACGTTCAAATATAAAATACTTTGGTCTAGTCATAGATAACAAACTTAAATGGCTCTATCAAATAAACTATGTATCCACTAAATGTGAGCGATATATTAATGTTCTAAGAATAATATCCAAAGTAAGATGGGGAGCTGATCCTAGCATTAGTAAAAATGTTTACAGAGCATGCGTTAGAGCCATAACGGACTACGGTTCCACTCTGTATGGGTCTGCATCAAACAGAATATTAAAGCGAATCAATATAATACGCAATAAAGCTCTACGTATTTGTCTAGGTGCCATGAAATCTACCCCCGTCGATGCACTGTATGTTGAAGCTCAAGAGCCGCCTGTATTTCTAAGGCGCCAATTCCTAGCTGCAAAACAGATAATTAAGATGAAGGCAATTAATAGCAGACATATATTAGACCATATATATAAACTTGCAGTAAGAATACCGGTGAATATAGTAGATATATACATTAACCTTGGAACAAAATTAAATTACTTTGAATATATGCAATCTATTAATGTAAATTATCCTTCATACGGCGAAAATACTCTAAACAATTTTACTTTGTATAAAAGTATCCGCTCAGAAATTCCTGCATCGATGGTAATTTTTACTGATGCATCCAAGTCTAAAGAAGGATGCGGATGTGGCTTACTTGTGCCTAGAAATGAATATGAAAAGAAGGTAAAATTACACAATAATGTATCCATTTTCACAGCAGAGGCAGTTGCAATTGCAAAGGCTCTAAAATATAGAACTCATCCAAAAAAAAATAACCCCATAATATTGAACATCATCGAATGCTTGAAATATCTGGAGAAAAAACATGTAAAAATCCGTTTCTATTGGATCAAAGGACATTCAGGTATAGAGCCTAGTGAGGCTGTGGATCATTTAGCAAAGGAGGCTATAAATAGTAATAACATACTGACGGAAAAAGTACCATCTAATGATCTTATTTCTCATCTAAAAACCAAAATATTAAAAGATGATTGGCAAGCATATTGGAAGCATTCGTATACGAATAGAATGACACACTACGCAAAAATACACCCAAATGTAACTATCCGAGAATGGCATAAGGAACATAGGGTATCAAGGATATATCGCACTACCGTCGCTCGATTAAAATTTAACCATGGACATTTCCAGCACATTTACACAAACTTAAAATTATCGAATCAGCTTTGTGTTGGTAGCCGTGGTCCATATTACAAACCATCAATTGTGTTTTTTTTATGTTGCAGAATGGCATCTAAAGTAAAAGGAAAGGCCAGACAGGCGTGGGATAAAAGTGCAATGGCAGATGCAATTAAAGCTGTACGAGAAAAGACAATGGGCTTTTTAAAAGCATCGAAAACATACGGAGTACCCAAAACTACACTTTTACGATTAACAAAAACAGAAAATGAATCACTTTTAGTAGAAGAATCTGTTAATGATCCACTACCTGATAGGATAACACCAGTTATTGAAAATGGTGATAACAATTTTCCTGAGGCAGATGCTGTTGAAGCTCTGGAAGCCCACTCCACACCTATTTCTACTCTGACTTTTGACGAAAGTCACCTTCCAAATCTACAATCCAAGGAATCGACAACCACCTTGAATGATTCAGTGGCTGGTTCCTCCACATCAGCTAGAATATATTTGTCAACAAAAGTGTTGCAACCCATACCACGTTTGATGAAAACTCGAGATTTAGAAACATCGATAAAAAGGAAGGAGGAATCAGATAAATTAAAGAAAAAGAGACCGTTTAACATTAAAAATAAATCAAAGAAAGCACCAAAGAAAAATATCAATGCAAAATATAAAGGATCATCTTCTAAAACTTCTAATCAGAGTGACTATTTAGTTGATGATAGCATAGACGAGAGTCCCGACCGCTCTCAAAATGAAAACGCCAAATGCTTGTATTGTCATGGGCTTTTTTTCTGA
Protein Sequence
MLNKLNILQWNCQSAAARRTSLEVILTQQNIDIALISETWYKPSQKITFKGYHIIRNDRKDKMDMLAQPYYFCSVDAYCGIFKCINTPSVFGGDFNAHYSTFGSSKTENAGIILIKAIDEHDLVFLNNGQPTRITRPDQSESVVDITLTTSNISTKCNWNLLSDSFSLDHFPIIIEWKTKSEDYTKYQNYINKHYQNVIEPESSSDKIKLLTEIITKAADYSFKINVPFVPRNKDSPLWWDSEYTEKVGMRKRIINAYKKNKTVDNYIKCREASAYTKRFLKQKKSESWRNFCNSLDKNASPNYIWKTIRKFSRAYQKPHEKEESWILEFLGNLTSAYITNSKKSYQKKTSNCIFDKPFTIAELEYIMSNTKDTAPGLDNITYNMVAKLPHIKRILLMVYNNIWLNNEGVPEFKNVLVVPILKQDKNPKLAISYRPISLLSVYTKLYERLVKERLEWWIVENNILPMQQFGLKKNSGSLDALKYLITNIQNCFANNSHLECVFLDIQIAYDCVNIDNLENKLINLDIPYKYSPRVASLGLPQGSSLSPILFNLYTLDLHGTIGNRVSTIQHADDICIFAQNKNLKMLQQTTKTALNITMRWLRSNGFDLNPKKSAVMYFSRHRSLPDHGINLKGTQIPIRSNIKYFGLVIDNKLKWLYQINYVSTKCERYINVLRIISKVRWGADPSISKNVYRACVRAITDYGSTLYGSASNRILKRINIIRNKALRICLGAMKSTPVDALYVEAQEPPVFLRRQFLAAKQIIKMKAINSRHILDHIYKLAVRIPVNIVDIYINLGTKLNYFEYMQSINVNYPSYGENTLNNFTLYKSIRSEIPASMVIFTDASKSKEGCGCGLLVPRNEYEKKVKLHNNVSIFTAEAVAIAKALKYRTHPKKNNPIILNIIECLKYLEKKHVKIRFYWIKGHSGIEPSEAVDHLAKEAINSNNILTEKVPSNDLISHLKTKILKDDWQAYWKHSYTNRMTHYAKIHPNVTIREWHKEHRVSRIYRTTVARLKFNHGHFQHIYTNLKLSNQLCVGSRGPYYKPSIVFFLCCRMASKVKGKARQAWDKSAMADAIKAVREKTMGFLKASKTYGVPKTTLLRLTKTENESLLVEESVNDPLPDRITPVIENGDNNFPEADAVEALEAHSTPISTLTFDESHLPNLQSKESTTTLNDSVAGSSTSARIYLSTKVLQPIPRLMKTRDLETSIKRKEESDKLKKKRPFNIKNKSKKAPKKNINAKYKGSSSKTSNQSDYLVDDSIDESPDRSQNENAKCLYCHGLFF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-